RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 LINC00472Q9H8W2 130 aa10.02□□□□□ -0.81
SSH3-209ENST00000532600 DEFB116Q30KQ4 102 aa10□□□□□ -0.81
SSH3-209ENST00000532600 FLGP20930 4061 aaPredicted RBP9.95□□□□□ -0.82
SSH3-209ENST00000532600 IGKV4-1P06312 121 aa9.95□□□□□ -0.82
SSH3-209ENST00000532600 LORP23490 312 aaPredicted RBP9.95□□□□□ -0.82
SSH3-209ENST00000532600 SIGMAR1Q99720 223 aa9.95□□□□□ -0.82
SSH3-209ENST00000532600 A0A1B0GW54 56 aa9.94□□□□□ -0.82
SSH3-209ENST00000532600 F8W1H4 67 aa9.94□□□□□ -0.82
SSH3-209ENST00000532600 KRTAP10-6P60371 365 aaPredicted RBP9.92□□□□□ -0.82
SSH3-209ENST00000532600 C21orf62-AS1Q17RA5 79 aa9.92□□□□□ -0.82
SSH3-209ENST00000532600 A0A1B0GV90 55 aa9.91□□□□□ -0.82
SSH3-209ENST00000532600 Q75L30 129 aa9.9□□□□□ -0.82
SSH3-209ENST00000532600 ETDBQ3ZM63 59 aa9.89□□□□□ -0.83
SSH3-209ENST00000532600 FSIP2Q5CZC0 6907 aa9.88□□□□□ -0.83
SSH3-209ENST00000532600 DSCR10P59022 87 aa9.88□□□□□ -0.83
SSH3-209ENST00000532600 NOTCH2NLQ7Z3S9 236 aa9.87□□□□□ -0.83
SSH3-209ENST00000532600 NREPQ16612 68 aa9.84□□□□□ -0.83
SSH3-209ENST00000532600 COX6B2Q6YFQ2 88 aa9.84□□□□□ -0.83
SSH3-209ENST00000532600 CRCT1Q9UGL9 99 aa9.84□□□□□ -0.83
SSH3-209ENST00000532600 J3KT08 172 aa9.83□□□□□ -0.84
SSH3-209ENST00000532600 IGHV6-1A0A0B4J1U7 121 aa9.82□□□□□ -0.84
SSH3-209ENST00000532600 A0A1B0GVX0 72 aa9.82□□□□□ -0.84
SSH3-209ENST00000532600 ATP11AUNQ6ZP68 121 aa9.82□□□□□ -0.84
SSH3-209ENST00000532600 KRTAP16-1A8MUX0 517 aa9.81□□□□□ -0.84
SSH3-209ENST00000532600 M0R2T5 61 aa9.8□□□□□ -0.84
SSH3-209ENST00000532600 C20orf166-AS1Q96NR2 134 aa9.8□□□□□ -0.84
SSH3-209ENST00000532600 LINC00313P59037 77 aa9.79□□□□□ -0.84
SSH3-209ENST00000532600 Q6ZVQ6 151 aa9.79□□□□□ -0.84
SSH3-209ENST00000532600 LINC00846Q9NV44 126 aa9.79□□□□□ -0.84
SSH3-209ENST00000532600 IGKV3D-7A0A0C4DH55 119 aa9.78□□□□□ -0.84
SSH3-209ENST00000532600 A8MUU9 505 aa9.78□□□□□ -0.84
SSH3-209ENST00000532600 A8MWP4 228 aa9.78□□□□□ -0.84
SSH3-209ENST00000532600 C8orf87E5RJ46 101 aa9.73□□□□□ -0.85
SSH3-209ENST00000532600 PRR15Q8IV56 129 aa9.72□□□□□ -0.85
SSH3-209ENST00000532600 NDUFB1O75438 58 aa9.71□□□□□ -0.86
SSH3-209ENST00000532600 K7EQZ3 153 aa9.7□□□□□ -0.86
SSH3-209ENST00000532600 BPY2O14599 106 aa9.7□□□□□ -0.86
SSH3-209ENST00000532600 C8orf17Q9NRJ1 99 aa9.7□□□□□ -0.86
SSH3-209ENST00000532600 Q8N9L7 120 aa9.67□□□□□ -0.86
SSH3-209ENST00000532600 UBL5Q9BZL1 73 aa9.67□□□□□ -0.86
SSH3-209ENST00000532600 MMP24-AS1A0A0U1RRL7 71 aa9.65□□□□□ -0.86
SSH3-209ENST00000532600 Q8N9P0 234 aaPredicted RBP9.6□□□□□ -0.87
SSH3-209ENST00000532600 FAM240AA0A1B0GVK7 77 aa9.59□□□□□ -0.87
SSH3-209ENST00000532600 KRTAP9-8Q9BYQ0 159 aa9.58□□□□□ -0.88
SSH3-209ENST00000532600 ACYP1P07311 99 aa9.56□□□□□ -0.88
SSH3-209ENST00000532600 TMEM254Q8TBM7 123 aa9.55□□□□□ -0.88
SSH3-209ENST00000532600 hDV103S1A0JD37 113 aa9.54□□□□□ -0.88
SSH3-209ENST00000532600 MPLKIPQ8TAP9 179 aa9.53□□□□□ -0.88
SSH3-209ENST00000532600 MRPL34Q9BQ48 92 aaKnown RBP9.53□□□□□ -0.88
SSH3-209ENST00000532600 HRES1P13985 223 aa9.52□□□□□ -0.89
SSH3-209ENST00000532600 CXCL6P80162 114 aa9.52□□□□□ -0.89
SSH3-209ENST00000532600 WFDC13Q8IUB5 93 aa9.51□□□□□ -0.89
SSH3-209ENST00000532600 ZCCHC13Q8WW36 166 aaKnown RBP9.5□□□□□ -0.89
SSH3-209ENST00000532600 USH2AO75445 5202 aa9.48□□□□□ -0.89
SSH3-209ENST00000532600 CASC2Q6XLA1 102 aa9.48□□□□□ -0.89
SSH3-209ENST00000532600 HCG22E2RYF7 251 aa9.45□□□□□ -0.9
SSH3-209ENST00000532600 SSPOA2VEC9 5147 aa9.42□□□□□ -0.9
SSH3-209ENST00000532600 MT2AP02795 61 aa9.42□□□□□ -0.9
SSH3-209ENST00000532600 NDUFS5O43920 106 aa9.41□□□□□ -0.9
SSH3-209ENST00000532600 FAM236DA0A1B0GTK5 79 aa9.4□□□□□ -0.9
SSH3-209ENST00000532600 FAM236CP0DP71 79 aa9.4□□□□□ -0.9
SSH3-209ENST00000532600 ATP5EP2Q5VTU8 51 aa9.4□□□□□ -0.9
SSH3-209ENST00000532600 LINC00643Q86TS7 51 aa9.39□□□□□ -0.91
SSH3-209ENST00000532600 Q5W150 140 aa9.38□□□□□ -0.91
SSH3-209ENST00000532600 RBM12B-AS1Q9P1G2 102 aa9.37□□□□□ -0.91
SSH3-209ENST00000532600 J3QR89 54 aa9.36□□□□□ -0.91
SSH3-209ENST00000532600 MT1FP04733 61 aa9.36□□□□□ -0.91
SSH3-209ENST00000532600 SPINK7P58062 85 aa9.35□□□□□ -0.91
SSH3-209ENST00000532600 HIST1H4AP62805 103 aaKnown RBP9.31□□□□□ -0.92
SSH3-209ENST00000532600 A0A087WVE0 104 aa9.3□□□□□ -0.92
SSH3-209ENST00000532600 LCE2BO14633 110 aa9.28□□□□□ -0.92
SSH3-209ENST00000532600 KRTAP9-3Q9BYQ3 159 aa9.28□□□□□ -0.92
SSH3-209ENST00000532600 K7ERU9 68 aa9.22□□□□□ -0.93
SSH3-209ENST00000532600 KRTAP10-10P60014 251 aa9.22□□□□□ -0.93
SSH3-209ENST00000532600 IGKV2D-30A0A075B6S6 120 aa9.21□□□□□ -0.94
SSH3-209ENST00000532600 IGKV2-30P06310 120 aa9.21□□□□□ -0.94
SSH3-209ENST00000532600 TP53AIP1Q9HCN2 124 aa9.21□□□□□ -0.94
SSH3-209ENST00000532600 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.2□□□□□ -0.94
SSH3-209ENST00000532600 FCGBPQ9Y6R7 5405 aaPredicted RBP9.18□□□□□ -0.94
SSH3-209ENST00000532600 C7orf65Q6ZTY9 151 aa9.17□□□□□ -0.94
SSH3-209ENST00000532600 MT-ATP8P03928 68 aa9.15□□□□□ -0.94
SSH3-209ENST00000532600 KRTAP19-1Q8IUB9 90 aa9.13□□□□□ -0.95
SSH3-209ENST00000532600 TRAV22A0A0B4J277 110 aa9.08□□□□□ -0.96
SSH3-209ENST00000532600 KRTAP9-7A8MTY7 169 aa9.08□□□□□ -0.96
SSH3-209ENST00000532600 UQCRQO14949 82 aa9.08□□□□□ -0.96
SSH3-209ENST00000532600 OCR1Q9BZK8 76 aa9.07□□□□□ -0.96
SSH3-209ENST00000532600 IMUPQ9GZP8 106 aa9.04□□□□□ -0.96
SSH3-209ENST00000532600 C4orf26Q17RF5 130 aa9.03□□□□□ -0.96
SSH3-209ENST00000532600 H0Y9P7 68 aa9.02□□□□□ -0.97
SSH3-209ENST00000532600 CYP4F30PQ9H0H9 118 aa9.02□□□□□ -0.97
SSH3-209ENST00000532600 LOC101927531A0A1B0GV80 90 aa8.98□□□□□ -0.97
SSH3-209ENST00000532600 KRTAP3-1Q9BYR8 98 aa8.98□□□□□ -0.97
SSH3-209ENST00000532600 H1FX-AS1Q4G0G2 97 aa8.97□□□□□ -0.97
SSH3-209ENST00000532600 ATOX1O00244 68 aa8.95□□□□□ -0.98
SSH3-209ENST00000532600 SCGB1A1P11684 91 aa8.94□□□□□ -0.98
SSH3-209ENST00000532600 FAM236AA0A1B0GUQ0 79 aa8.93□□□□□ -0.98
SSH3-209ENST00000532600 FAM236BA0A1B0GV22 79 aa8.93□□□□□ -0.98
SSH3-209ENST00000532600 KRTAP19-6Q3LI70 58 aa8.93□□□□□ -0.98
SSH3-209ENST00000532600 C1orf64Q8NEQ6 169 aa8.92□□□□□ -0.98
SSH3-209ENST00000532600 LINC00208Q96KT6 92 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms