RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 HIGD1BQ9P298 99 aa9.82□□□□□ -0.84
CHKA-206ENST00000531341 CEND1Q8N111 149 aa9.79□□□□□ -0.84
CHKA-206ENST00000531341 DNAL4O96015 105 aa9.78□□□□□ -0.84
CHKA-206ENST00000531341 VPS25Q9BRG1 176 aa9.78□□□□□ -0.84
CHKA-206ENST00000531341 TMEM256-PLSCR3K7ERE1 68 aa9.77□□□□□ -0.85
CHKA-206ENST00000531341 FXYD2P54710 66 aa9.75□□□□□ -0.85
CHKA-206ENST00000531341 KRTAP20-1Q3LI63 56 aa9.74□□□□□ -0.85
CHKA-206ENST00000531341 H3BQ85 93 aa9.73□□□□□ -0.85
CHKA-206ENST00000531341 PAM16Q9Y3D7 125 aa9.71□□□□□ -0.86
CHKA-206ENST00000531341 UBE2V1Q13404 147 aa9.7□□□□□ -0.86
CHKA-206ENST00000531341 H1FX-AS1Q4G0G2 97 aa9.7□□□□□ -0.86
CHKA-206ENST00000531341 LYRM7Q5U5X0 104 aa9.7□□□□□ -0.86
CHKA-206ENST00000531341 J3KT08 172 aa9.69□□□□□ -0.86
CHKA-206ENST00000531341 SPATA45Q537H7 98 aa9.69□□□□□ -0.86
CHKA-206ENST00000531341 MDN1Q9NU22 5596 aa9.68□□□□□ -0.86
CHKA-206ENST00000531341 TMEM238LA0A1B0GVL6 79 aa9.68□□□□□ -0.86
CHKA-206ENST00000531341 A6NJY4 79 aa9.68□□□□□ -0.86
CHKA-206ENST00000531341 C8orf17Q9NRJ1 99 aa9.67□□□□□ -0.86
CHKA-206ENST00000531341 A6NN06 94 aa9.66□□□□□ -0.86
CHKA-206ENST00000531341 S100A6P06703 90 aa9.66□□□□□ -0.86
CHKA-206ENST00000531341 PSMB2P49721 201 aa9.66□□□□□ -0.86
CHKA-206ENST00000531341 K7ERJ3 54 aa9.65□□□□□ -0.86
CHKA-206ENST00000531341 RBM3P98179 157 aaKnown RBP9.65□□□□□ -0.86
CHKA-206ENST00000531341 NDUFB1O75438 58 aa9.63□□□□□ -0.87
CHKA-206ENST00000531341 Q6ZQT0 140 aa9.63□□□□□ -0.87
CHKA-206ENST00000531341 IGKV3D-7A0A0C4DH55 119 aa9.62□□□□□ -0.87
CHKA-206ENST00000531341 DSCR8Q96T75 97 aa9.62□□□□□ -0.87
CHKA-206ENST00000531341 KMT2DO14686 5537 aa9.62□□□□□ -0.87
CHKA-206ENST00000531341 MT1BP07438 61 aa9.61□□□□□ -0.87
CHKA-206ENST00000531341 Q6ZVQ6 151 aa9.59□□□□□ -0.87
CHKA-206ENST00000531341 COX6CP09669 75 aa9.57□□□□□ -0.88
CHKA-206ENST00000531341 VAMP8Q9BV40 100 aa9.56□□□□□ -0.88
CHKA-206ENST00000531341 C9JAW5 83 aa9.55□□□□□ -0.88
CHKA-206ENST00000531341 KRTAP5-9P26371 169 aa9.53□□□□□ -0.88
CHKA-206ENST00000531341 C21orf62-AS1Q17RA5 79 aa9.5□□□□□ -0.89
CHKA-206ENST00000531341 Q5VV11 94 aa9.48□□□□□ -0.89
CHKA-206ENST00000531341 BAALC-AS2P0C853 105 aa9.47□□□□□ -0.89
CHKA-206ENST00000531341 KRTAP10-5P60370 271 aa9.47□□□□□ -0.89
CHKA-206ENST00000531341 PRR15Q8IV56 129 aa9.47□□□□□ -0.89
CHKA-206ENST00000531341 MRPL34Q9BQ48 92 aaKnown RBP9.47□□□□□ -0.89
CHKA-206ENST00000531341 MMP24-AS1A0A0U1RRL7 71 aa9.46□□□□□ -0.9
CHKA-206ENST00000531341 S100A1P23297 94 aa9.46□□□□□ -0.9
CHKA-206ENST00000531341 HSD52Q0P140 79 aa9.46□□□□□ -0.9
CHKA-206ENST00000531341 KRTAP19-8Q3LI54 63 aa9.46□□□□□ -0.9
CHKA-206ENST00000531341 IGKV2D-30A0A075B6S6 120 aa9.44□□□□□ -0.9
CHKA-206ENST00000531341 IGKV2-30P06310 120 aa9.44□□□□□ -0.9
CHKA-206ENST00000531341 TMEM254Q8TBM7 123 aa9.44□□□□□ -0.9
CHKA-206ENST00000531341 SCGB1C2P0DMR2 95 aa9.43□□□□□ -0.9
CHKA-206ENST00000531341 FAM236AA0A1B0GUQ0 79 aa9.42□□□□□ -0.9
CHKA-206ENST00000531341 FAM236BA0A1B0GV22 79 aa9.42□□□□□ -0.9
CHKA-206ENST00000531341 C5orf47Q569G3 176 aa9.41□□□□□ -0.9
CHKA-206ENST00000531341 SPRR2GQ9BYE4 73 aa9.41□□□□□ -0.9
CHKA-206ENST00000531341 Q5W150 140 aa9.4□□□□□ -0.9
CHKA-206ENST00000531341 NDUFS5O43920 106 aa9.39□□□□□ -0.91
CHKA-206ENST00000531341 C4orf26Q17RF5 130 aa9.37□□□□□ -0.91
CHKA-206ENST00000531341 LOC110117498A0A087WWA1 95 aa9.35□□□□□ -0.91
CHKA-206ENST00000531341 hDV103S1A0JD37 113 aa9.35□□□□□ -0.91
CHKA-206ENST00000531341 C7orf65Q6ZTY9 151 aa9.35□□□□□ -0.91
CHKA-206ENST00000531341 A0A1B0GW54 56 aa9.34□□□□□ -0.91
CHKA-206ENST00000531341 KRTAP2-3P0C7H8 128 aa9.33□□□□□ -0.92
CHKA-206ENST00000531341 KRTAP2-4Q9BYR9 128 aa9.33□□□□□ -0.92
CHKA-206ENST00000531341 K7EQZ3 153 aa9.32□□□□□ -0.92
CHKA-206ENST00000531341 NREPQ16612 68 aa9.31□□□□□ -0.92
CHKA-206ENST00000531341 JMJD7-PLA2G4BH0Y9G9 81 aa9.3□□□□□ -0.92
CHKA-206ENST00000531341 KRTAP3-1Q9BYR8 98 aa9.28□□□□□ -0.92
CHKA-206ENST00000531341 C14orf132Q9NPU4 83 aa9.28□□□□□ -0.92
CHKA-206ENST00000531341 PYY3Q5JQD4 70 aa9.24□□□□□ -0.93
CHKA-206ENST00000531341 PDE6GP18545 87 aa9.23□□□□□ -0.93
CHKA-206ENST00000531341 S4R3F8 94 aa9.21□□□□□ -0.94
CHKA-206ENST00000531341 ATXN8Q156A1 80 aa9.2□□□□□ -0.94
CHKA-206ENST00000531341 CSAG1Q6PB30 78 aa9.19□□□□□ -0.94
CHKA-206ENST00000531341 LCA10Q71F78 164 aa9.19□□□□□ -0.94
CHKA-206ENST00000531341 NAA38Q9BRA0 125 aaKnown RBP9.19□□□□□ -0.94
CHKA-206ENST00000531341 KLKP1Q107X0 134 aa9.17□□□□□ -0.94
CHKA-206ENST00000531341 UQCR10Q9UDW1 63 aa9.17□□□□□ -0.94
CHKA-206ENST00000531341 HCG22E2RYF7 251 aa9.15□□□□□ -0.94
CHKA-206ENST00000531341 IMUPQ9GZP8 106 aa9.13□□□□□ -0.95
CHKA-206ENST00000531341 SPRR2EP22531 72 aa9.12□□□□□ -0.95
CHKA-206ENST00000531341 SPRR2BP35325 72 aa9.12□□□□□ -0.95
CHKA-206ENST00000531341 SPRR2AP35326 72 aa9.12□□□□□ -0.95
CHKA-206ENST00000531341 SMCPP49901 116 aaPredicted RBP9.12□□□□□ -0.95
CHKA-206ENST00000531341 SPRR2FQ96RM1 72 aa9.12□□□□□ -0.95
CHKA-206ENST00000531341 Q8N9L7 120 aa9.11□□□□□ -0.95
CHKA-206ENST00000531341 BPY2O14599 106 aa9.09□□□□□ -0.95
CHKA-206ENST00000531341 CASC2Q6XLA1 102 aa9.09□□□□□ -0.95
CHKA-206ENST00000531341 C1orf64Q8NEQ6 169 aa9.08□□□□□ -0.96
CHKA-206ENST00000531341 KRTAP3-3Q9BYR6 98 aa9.05□□□□□ -0.96
CHKA-206ENST00000531341 CXCL6P80162 114 aa9.03□□□□□ -0.96
CHKA-206ENST00000531341 KRTAP2-2Q9BYT5 123 aa9□□□□□ -0.97
CHKA-206ENST00000531341 KRTAP2-1Q9BYU5 128 aa9□□□□□ -0.97
CHKA-206ENST00000531341 LCE1AQ5T7P2 110 aa8.95□□□□□ -0.98
CHKA-206ENST00000531341 CRIPTQ9P021 101 aa8.94□□□□□ -0.98
CHKA-206ENST00000531341 A0A087WVE0 104 aa8.91□□□□□ -0.98
CHKA-206ENST00000531341 MT1XP80297 61 aa8.87□□□□□ -0.99
CHKA-206ENST00000531341 KRTAP8-1Q8IUC2 63 aa8.87□□□□□ -0.99
CHKA-206ENST00000531341 M0R143 59 aa8.86□□□□□ -0.99
CHKA-206ENST00000531341 H3BT86 120 aa8.81□□□□□ -1
CHKA-206ENST00000531341 SPRR2DP22532 72 aa8.81□□□□□ -1
CHKA-206ENST00000531341 PRO2289Q9P1D8 64 aa8.77□□□□□ -1.01
CHKA-206ENST00000531341 TSTD3H0UI37 97 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms