RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 DEFB116Q30KQ4 102 aa7.95□□□□□ -1.14
CTSB-215ENST00000528965 FAM236DA0A1B0GTK5 79 aa7.94□□□□□ -1.14
CTSB-215ENST00000528965 FAM236CP0DP71 79 aa7.94□□□□□ -1.14
CTSB-215ENST00000528965 KRTAP9-8Q9BYQ0 159 aa7.94□□□□□ -1.14
CTSB-215ENST00000528965 JMJD7-PLA2G4BH0Y9G9 81 aa7.93□□□□□ -1.14
CTSB-215ENST00000528965 IGHV6-1A0A0B4J1U7 121 aa7.91□□□□□ -1.14
CTSB-215ENST00000528965 RBM12B-AS1Q9P1G2 102 aa7.89□□□□□ -1.15
CTSB-215ENST00000528965 LINC00472Q9H8W2 130 aa7.88□□□□□ -1.15
CTSB-215ENST00000528965 J3KT08 172 aa7.87□□□□□ -1.15
CTSB-215ENST00000528965 PDE6GP18545 87 aa7.87□□□□□ -1.15
CTSB-215ENST00000528965 LOC105371267A0A1B0GV96 52 aa7.86□□□□□ -1.15
CTSB-215ENST00000528965 NDUFB1O75438 58 aa7.86□□□□□ -1.15
CTSB-215ENST00000528965 KRTAP16-1A8MUX0 517 aa7.84□□□□□ -1.15
CTSB-215ENST00000528965 C8orf87E5RJ46 101 aa7.83□□□□□ -1.16
CTSB-215ENST00000528965 Q6ZQT0 140 aa7.83□□□□□ -1.16
CTSB-215ENST00000528965 A0A1B0GVX0 72 aa7.82□□□□□ -1.16
CTSB-215ENST00000528965 C9orf118A6NHY6 69 aa7.82□□□□□ -1.16
CTSB-215ENST00000528965 MT2AP02795 61 aa7.82□□□□□ -1.16
CTSB-215ENST00000528965 C14orf132Q9NPU4 83 aa7.82□□□□□ -1.16
CTSB-215ENST00000528965 LOC110117498A0A087WWA1 95 aa7.81□□□□□ -1.16
CTSB-215ENST00000528965 A0A1B0GW54 56 aa7.81□□□□□ -1.16
CTSB-215ENST00000528965 HRES1P13985 223 aa7.8□□□□□ -1.16
CTSB-215ENST00000528965 MPLKIPQ8TAP9 179 aa7.8□□□□□ -1.16
CTSB-215ENST00000528965 NOTCH2NLQ7Z3S9 236 aa7.79□□□□□ -1.16
CTSB-215ENST00000528965 MTURNQ8N3F0 131 aa7.79□□□□□ -1.16
CTSB-215ENST00000528965 USH2AO75445 5202 aa7.78□□□□□ -1.16
CTSB-215ENST00000528965 A0A1W2PPM0 123 aa7.78□□□□□ -1.16
CTSB-215ENST00000528965 NREPQ16612 68 aa7.78□□□□□ -1.16
CTSB-215ENST00000528965 SSPOA2VEC9 5147 aa7.76□□□□□ -1.17
CTSB-215ENST00000528965 TAX1BP3O14907 124 aa7.76□□□□□ -1.17
CTSB-215ENST00000528965 H3BT86 120 aa7.75□□□□□ -1.17
CTSB-215ENST00000528965 MT1FP04733 61 aa7.75□□□□□ -1.17
CTSB-215ENST00000528965 KRTAP10-10P60014 251 aa7.75□□□□□ -1.17
CTSB-215ENST00000528965 A8MWP4 228 aa7.71□□□□□ -1.18
CTSB-215ENST00000528965 SPCS1Q9Y6A9 102 aa7.71□□□□□ -1.18
CTSB-215ENST00000528965 LCE2BO14633 110 aa7.7□□□□□ -1.18
CTSB-215ENST00000528965 KRTAP19-1Q8IUB9 90 aa7.7□□□□□ -1.18
CTSB-215ENST00000528965 KRTAP9-3Q9BYQ3 159 aa7.7□□□□□ -1.18
CTSB-215ENST00000528965 ZCCHC13Q8WW36 166 aaKnown RBP7.69□□□□□ -1.18
CTSB-215ENST00000528965 C8orf17Q9NRJ1 99 aa7.69□□□□□ -1.18
CTSB-215ENST00000528965 COL5A1-AS1Q5SY13 56 aa7.68□□□□□ -1.18
CTSB-215ENST00000528965 LINC00846Q9NV44 126 aa7.67□□□□□ -1.18
CTSB-215ENST00000528965 FCGBPQ9Y6R7 5405 aaPredicted RBP7.66□□□□□ -1.18
CTSB-215ENST00000528965 IGKV3D-7A0A0C4DH55 119 aa7.65□□□□□ -1.18
CTSB-215ENST00000528965 SPINK7P58062 85 aa7.64□□□□□ -1.19
CTSB-215ENST00000528965 Q6ZVQ6 151 aa7.64□□□□□ -1.19
CTSB-215ENST00000528965 PRR15Q8IV56 129 aa7.64□□□□□ -1.19
CTSB-215ENST00000528965 BPY2O14599 106 aa7.63□□□□□ -1.19
CTSB-215ENST00000528965 NDUFS5O43920 106 aa7.62□□□□□ -1.19
CTSB-215ENST00000528965 Q8N9P0 234 aaPredicted RBP7.61□□□□□ -1.19
CTSB-215ENST00000528965 PCP4L1A6NKN8 68 aa7.58□□□□□ -1.2
CTSB-215ENST00000528965 TMEM254Q8TBM7 123 aa7.58□□□□□ -1.2
CTSB-215ENST00000528965 MRPL34Q9BQ48 92 aaKnown RBP7.58□□□□□ -1.2
CTSB-215ENST00000528965 hDV103S1A0JD37 113 aa7.57□□□□□ -1.2
CTSB-215ENST00000528965 WFDC13Q8IUB5 93 aa7.57□□□□□ -1.2
CTSB-215ENST00000528965 K7EQZ3 153 aa7.56□□□□□ -1.2
CTSB-215ENST00000528965 GTF2H5Q6ZYL4 71 aa7.56□□□□□ -1.2
CTSB-215ENST00000528965 MMP24-AS1A0A0U1RRL7 71 aa7.55□□□□□ -1.2
CTSB-215ENST00000528965 K7EP34 96 aa7.55□□□□□ -1.2
CTSB-215ENST00000528965 UBL5Q9BZL1 73 aa7.54□□□□□ -1.2
CTSB-215ENST00000528965 SMCPP49901 116 aaPredicted RBP7.52□□□□□ -1.21
CTSB-215ENST00000528965 KRTAP19-6Q3LI70 58 aa7.52□□□□□ -1.21
CTSB-215ENST00000528965 CASC2Q6XLA1 102 aa7.49□□□□□ -1.21
CTSB-215ENST00000528965 Q8N9L7 120 aa7.48□□□□□ -1.21
CTSB-215ENST00000528965 MACF1Q9UPN3 7388 aaKnown RBP7.47□□□□□ -1.21
CTSB-215ENST00000528965 PRO0461Q9UI25 63 aa7.47□□□□□ -1.21
CTSB-215ENST00000528965 F8W1H4 67 aa7.46□□□□□ -1.22
CTSB-215ENST00000528965 HCG22E2RYF7 251 aa7.44□□□□□ -1.22
CTSB-215ENST00000528965 IGKV2D-30A0A075B6S6 120 aa7.43□□□□□ -1.22
CTSB-215ENST00000528965 IGKV2-30P06310 120 aa7.43□□□□□ -1.22
CTSB-215ENST00000528965 H1FX-AS1Q4G0G2 97 aa7.42□□□□□ -1.22
CTSB-215ENST00000528965 SYNE2Q8WXH0 6885 aaKnown RBP7.41□□□□□ -1.22
CTSB-215ENST00000528965 ETDBQ3ZM63 59 aa7.4□□□□□ -1.22
CTSB-215ENST00000528965 CXCL6P80162 114 aa7.39□□□□□ -1.23
CTSB-215ENST00000528965 C7orf65Q6ZTY9 151 aa7.39□□□□□ -1.23
CTSB-215ENST00000528965 Q5W150 140 aa7.34□□□□□ -1.23
CTSB-215ENST00000528965 KRTAP6-3Q3LI67 103 aa7.31□□□□□ -1.24
CTSB-215ENST00000528965 TP53AIP1Q9HCN2 124 aa7.28□□□□□ -1.24
CTSB-215ENST00000528965 ACYP1P07311 99 aa7.27□□□□□ -1.25
CTSB-215ENST00000528965 C4orf26Q17RF5 130 aa7.25□□□□□ -1.25
CTSB-215ENST00000528965 HIST1H4AP62805 103 aaKnown RBP7.2□□□□□ -1.26
CTSB-215ENST00000528965 FAM236AA0A1B0GUQ0 79 aa7.19□□□□□ -1.26
CTSB-215ENST00000528965 FAM236BA0A1B0GV22 79 aa7.19□□□□□ -1.26
CTSB-215ENST00000528965 ATP5EP2Q5VTU8 51 aa7.17□□□□□ -1.26
CTSB-215ENST00000528965 FAM240AA0A1B0GVK7 77 aa7.16□□□□□ -1.26
CTSB-215ENST00000528965 C1orf64Q8NEQ6 169 aa7.16□□□□□ -1.26
CTSB-215ENST00000528965 C5orf47Q569G3 176 aa7.15□□□□□ -1.26
CTSB-215ENST00000528965 A6NN06 94 aa7.13□□□□□ -1.27
CTSB-215ENST00000528965 S4R3F8 94 aa7.12□□□□□ -1.27
CTSB-215ENST00000528965 TRAV22A0A0B4J277 110 aa7.11□□□□□ -1.27
CTSB-215ENST00000528965 Q5VV11 94 aa7.1□□□□□ -1.27
CTSB-215ENST00000528965 CSAG1Q6PB30 78 aa7.1□□□□□ -1.27
CTSB-215ENST00000528965 LOC101927531A0A1B0GV80 90 aa7.08□□□□□ -1.28
CTSB-215ENST00000528965 A0A1B0GV90 55 aa7.08□□□□□ -1.28
CTSB-215ENST00000528965 LINC00643Q86TS7 51 aa7.07□□□□□ -1.28
CTSB-215ENST00000528965 UQCRQO14949 82 aa7.06□□□□□ -1.28
CTSB-215ENST00000528965 KRTAP20-1Q3LI63 56 aa7.06□□□□□ -1.28
CTSB-215ENST00000528965 CYP4F30PQ9H0H9 118 aa7.06□□□□□ -1.28
CTSB-215ENST00000528965 NEBP20929 6669 aa7.05□□□□□ -1.28
CTSB-215ENST00000528965 ATOX1O00244 68 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms