RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 PDE6GP18545 87 aa4.72□□□□□ -1.65
SOX6-211ENST00000528429 A0A0G2JQZ4 141 aa4.71□□□□□ -1.65
SOX6-211ENST00000528429 PRR4Q16378 134 aa4.71□□□□□ -1.65
SOX6-211ENST00000528429 DNAH11Q96DT5 4516 aa4.71□□□□□ -1.66
SOX6-211ENST00000528429 CASC2Q6XLA1 102 aa4.71□□□□□ -1.66
SOX6-211ENST00000528429 SMIM29Q86T20 159 aa4.7□□□□□ -1.66
SOX6-211ENST00000528429 KRTAP13-1Q8IUC0 172 aa4.7□□□□□ -1.66
SOX6-211ENST00000528429 FAT2Q9NYQ8 4349 aa4.7□□□□□ -1.66
SOX6-211ENST00000528429 CSAG1Q6PB30 78 aa4.69□□□□□ -1.66
SOX6-211ENST00000528429 DNAH5Q8TE73 4624 aa4.69□□□□□ -1.66
SOX6-211ENST00000528429 Q6ZSA8 131 aa4.69□□□□□ -1.66
SOX6-211ENST00000528429 NOTCH2NLQ7Z3S9 236 aa4.69□□□□□ -1.66
SOX6-211ENST00000528429 KMT2CQ8NEZ4 4911 aaKnown RBP4.68□□□□□ -1.66
SOX6-211ENST00000528429 ZNF861PO60384 105 aa4.68□□□□□ -1.66
SOX6-211ENST00000528429 DNAH8Q96JB1 4490 aa4.68□□□□□ -1.66
SOX6-211ENST00000528429 PKD1P98161 4303 aa4.68□□□□□ -1.66
SOX6-211ENST00000528429 PKHD1P08F94 4074 aa4.68□□□□□ -1.66
SOX6-211ENST00000528429 OCR1Q9BZK8 76 aa4.68□□□□□ -1.66
SOX6-211ENST00000528429 ANAPC11Q9NYG5 84 aa4.68□□□□□ -1.66
SOX6-211ENST00000528429 A0A1W2PNM2 257 aa4.67□□□□□ -1.66
SOX6-211ENST00000528429 LOC101927531A0A1B0GV80 90 aa4.67□□□□□ -1.66
SOX6-211ENST00000528429 IGLV7-43P04211 117 aa4.67□□□□□ -1.66
SOX6-211ENST00000528429 IGFL1Q6UW32 110 aa4.67□□□□□ -1.66
SOX6-211ENST00000528429 SPRR4Q96PI1 79 aa4.66□□□□□ -1.66
SOX6-211ENST00000528429 Q8NBF4 154 aa4.66□□□□□ -1.66
SOX6-211ENST00000528429 SPRR1BP22528 89 aa4.65□□□□□ -1.66
SOX6-211ENST00000528429 P0C880 135 aa4.65□□□□□ -1.67
SOX6-211ENST00000528429 RYR2Q92736 4967 aa4.64□□□□□ -1.67
SOX6-211ENST00000528429 IGKV4-1P06312 121 aa4.64□□□□□ -1.67
SOX6-211ENST00000528429 IGLV8-61A0A075B6I0 122 aa4.63□□□□□ -1.67
SOX6-211ENST00000528429 Q8N9L7 120 aa4.63□□□□□ -1.67
SOX6-211ENST00000528429 A0A087WSZ3 146 aa4.62□□□□□ -1.67
SOX6-211ENST00000528429 A0A1B0GVY2 172 aa4.62□□□□□ -1.67
SOX6-211ENST00000528429 SPINK7P58062 85 aa4.62□□□□□ -1.67
SOX6-211ENST00000528429 MIR22HGQ0VDD5 57 aa4.62□□□□□ -1.67
SOX6-211ENST00000528429 LRP1BQ9NZR2 4599 aa4.62□□□□□ -1.67
SOX6-211ENST00000528429 SMR3BP02814 79 aaPredicted RBP4.62□□□□□ -1.67
SOX6-211ENST00000528429 ASB16-AS1Q495Z4 193 aa4.62□□□□□ -1.67
SOX6-211ENST00000528429 LINC00483Q53H64 154 aa4.61□□□□□ -1.67
SOX6-211ENST00000528429 DEFB116Q30KQ4 102 aa4.59□□□□□ -1.67
SOX6-211ENST00000528429 A0A1B0GW54 56 aa4.59□□□□□ -1.68
SOX6-211ENST00000528429 DYNC1H1Q14204 4646 aaKnown RBP4.58□□□□□ -1.68
SOX6-211ENST00000528429 RPL37AP61513 92 aaKnown RBP4.58□□□□□ -1.68
SOX6-211ENST00000528429 C8orf17Q9NRJ1 99 aa4.58□□□□□ -1.68
SOX6-211ENST00000528429 LUZP6Q538Z0 58 aa4.58□□□□□ -1.68
SOX6-211ENST00000528429 ZCCHC13Q8WW36 166 aaKnown RBP4.58□□□□□ -1.68
SOX6-211ENST00000528429 LINC00208Q96KT6 92 aa4.58□□□□□ -1.68
SOX6-211ENST00000528429 VPS13BQ7Z7G8 4022 aa4.57□□□□□ -1.68
SOX6-211ENST00000528429 A8MWP4 228 aa4.57□□□□□ -1.68
SOX6-211ENST00000528429 A0A087X002 238 aa4.56□□□□□ -1.68
SOX6-211ENST00000528429 RYR3Q15413 4870 aa4.55□□□□□ -1.68
SOX6-211ENST00000528429 SPAG11AQ6PDA7 123 aa4.54□□□□□ -1.68
SOX6-211ENST00000528429 K7EQZ3 153 aa4.53□□□□□ -1.68
SOX6-211ENST00000528429 DSCR10P59022 87 aa4.53□□□□□ -1.68
SOX6-211ENST00000528429 NDUFB1O75438 58 aa4.53□□□□□ -1.68
SOX6-211ENST00000528429 KRTAP1-4P0C5Y4 121 aa4.52□□□□□ -1.69
SOX6-211ENST00000528429 KRTAP13-2Q52LG2 175 aa4.52□□□□□ -1.69
SOX6-211ENST00000528429 NDUFAF8A1L188 74 aa4.52□□□□□ -1.69
SOX6-211ENST00000528429 FAT1Q14517 4588 aa4.51□□□□□ -1.69
SOX6-211ENST00000528429 SPINK6Q6UWN8 80 aa4.51□□□□□ -1.69
SOX6-211ENST00000528429 SSBP3-AS1Q7Z2R9 100 aa4.51□□□□□ -1.69
SOX6-211ENST00000528429 APOBP04114 4563 aaKnown RBP4.51□□□□□ -1.69
SOX6-211ENST00000528429 LINC00472Q9H8W2 130 aa4.5□□□□□ -1.69
SOX6-211ENST00000528429 LINC01558Q9Y6Z2 57 aa4.5□□□□□ -1.69
SOX6-211ENST00000528429 TYMSOSQ8TAI1 123 aa4.49□□□□□ -1.69
SOX6-211ENST00000528429 C20orf166-AS1Q96NR2 134 aa4.49□□□□□ -1.69
SOX6-211ENST00000528429 WFDC13Q8IUB5 93 aa4.48□□□□□ -1.69
SOX6-211ENST00000528429 Q96NJ1 140 aa4.48□□□□□ -1.69
SOX6-211ENST00000528429 KRTAP10-4P60372 401 aaPredicted RBP4.47□□□□□ -1.69
SOX6-211ENST00000528429 SPANXA2-OT1Q8N9U9 137 aa4.46□□□□□ -1.7
SOX6-211ENST00000528429 Q5VSD8 79 aa4.45□□□□□ -1.7
SOX6-211ENST00000528429 COA5Q86WW8 74 aa4.45□□□□□ -1.7
SOX6-211ENST00000528429 LINC00304Q8N9R0 145 aa4.42□□□□□ -1.7
SOX6-211ENST00000528429 A0A1B0GVX0 72 aa4.42□□□□□ -1.7
SOX6-211ENST00000528429 H3BPC8 53 aa4.42□□□□□ -1.7
SOX6-211ENST00000528429 H0Y9P7 68 aa4.41□□□□□ -1.7
SOX6-211ENST00000528429 KRTAP25-1Q3LHN0 102 aa4.41□□□□□ -1.7
SOX6-211ENST00000528429 FLG2Q5D862 2391 aaPredicted RBP4.41□□□□□ -1.7
SOX6-211ENST00000528429 HSPG2P98160 4391 aa4.41□□□□□ -1.7
SOX6-211ENST00000528429 KIAA1109Q2LD37 5005 aa4.41□□□□□ -1.7
SOX6-211ENST00000528429 MMP24-AS1A0A0U1RRL7 71 aa4.4□□□□□ -1.7
SOX6-211ENST00000528429 K7ERS5 55 aa4.4□□□□□ -1.7
SOX6-211ENST00000528429 SPINK1P00995 79 aa4.4□□□□□ -1.7
SOX6-211ENST00000528429 KRTAP29-1A8MX34 341 aaPredicted RBP4.39□□□□□ -1.71
SOX6-211ENST00000528429 EPPK1P58107 5090 aaKnown RBP4.39□□□□□ -1.71
SOX6-211ENST00000528429 RYR1P21817 5038 aa4.39□□□□□ -1.71
SOX6-211ENST00000528429 KRTAP17-1Q9BYP8 105 aa4.38□□□□□ -1.71
SOX6-211ENST00000528429 A8MUU9 505 aa4.37□□□□□ -1.71
SOX6-211ENST00000528429 IGLV7-46A0A075B6I9 117 aa4.35□□□□□ -1.71
SOX6-211ENST00000528429 Q8N1X5 172 aa4.35□□□□□ -1.71
SOX6-211ENST00000528429 MRPL34Q9BQ48 92 aaKnown RBP4.35□□□□□ -1.71
SOX6-211ENST00000528429 LRP1Q07954 4544 aaKnown RBP4.34□□□□□ -1.71
SOX6-211ENST00000528429 DMBT1Q9UGM3 2413 aaPredicted RBP4.34□□□□□ -1.72
SOX6-211ENST00000528429 SPATA8Q6RVD6 105 aa4.33□□□□□ -1.72
SOX6-211ENST00000528429 RPS29P62273 56 aaKnown RBP4.32□□□□□ -1.72
SOX6-211ENST00000528429 PKHD1L1Q86WI1 4243 aa4.32□□□□□ -1.72
SOX6-211ENST00000528429 MYCBP2O75592 4640 aa4.31□□□□□ -1.72
SOX6-211ENST00000528429 TP53AIP1Q9HCN2 124 aa4.3□□□□□ -1.72
SOX6-211ENST00000528429 KRTAP10-8P60410 259 aa4.29□□□□□ -1.72
SOX6-211ENST00000528429 C9orf92A6NGG3 77 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms