RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 TMEM256-PLSCR3K7ERE1 68 aa7.66□□□□□ -1.18
CLNS1A-210ENST00000528364 TRACP01848 142 aa7.66□□□□□ -1.18
CLNS1A-210ENST00000528364 KRTAP19-1Q8IUB9 90 aa7.65□□□□□ -1.18
CLNS1A-210ENST00000528364 H3BQ85 93 aa7.64□□□□□ -1.19
CLNS1A-210ENST00000528364 SMIM6P0DI80 62 aa7.64□□□□□ -1.19
CLNS1A-210ENST00000528364 HSD52Q0P140 79 aa7.63□□□□□ -1.19
CLNS1A-210ENST00000528364 VPS25Q9BRG1 176 aa7.63□□□□□ -1.19
CLNS1A-210ENST00000528364 UBE2V1Q13404 147 aa7.62□□□□□ -1.19
CLNS1A-210ENST00000528364 A0A1B0GVX0 72 aa7.61□□□□□ -1.19
CLNS1A-210ENST00000528364 TSTD3H0UI37 97 aa7.61□□□□□ -1.19
CLNS1A-210ENST00000528364 COX6CP09669 75 aa7.61□□□□□ -1.19
CLNS1A-210ENST00000528364 C8orf87E5RJ46 101 aa7.59□□□□□ -1.19
CLNS1A-210ENST00000528364 RBM3P98179 157 aaKnown RBP7.58□□□□□ -1.2
CLNS1A-210ENST00000528364 ZCCHC13Q8WW36 166 aaKnown RBP7.58□□□□□ -1.2
CLNS1A-210ENST00000528364 M0R143 59 aa7.57□□□□□ -1.2
CLNS1A-210ENST00000528364 SPINK7P58062 85 aa7.57□□□□□ -1.2
CLNS1A-210ENST00000528364 SCGB1C2P0DMR2 95 aa7.55□□□□□ -1.2
CLNS1A-210ENST00000528364 DSCR8Q96T75 97 aa7.54□□□□□ -1.2
CLNS1A-210ENST00000528364 BAALC-AS2P0C853 105 aa7.53□□□□□ -1.2
CLNS1A-210ENST00000528364 MTURNQ8N3F0 131 aa7.52□□□□□ -1.21
CLNS1A-210ENST00000528364 Q6ZQT0 140 aa7.51□□□□□ -1.21
CLNS1A-210ENST00000528364 LOC105371267A0A1B0GV96 52 aa7.5□□□□□ -1.21
CLNS1A-210ENST00000528364 C9JAW5 83 aa7.5□□□□□ -1.21
CLNS1A-210ENST00000528364 J3KT08 172 aa7.5□□□□□ -1.21
CLNS1A-210ENST00000528364 Q8N9P0 234 aaPredicted RBP7.49□□□□□ -1.21
CLNS1A-210ENST00000528364 NDUFB1O75438 58 aa7.46□□□□□ -1.22
CLNS1A-210ENST00000528364 C8orf17Q9NRJ1 99 aa7.46□□□□□ -1.22
CLNS1A-210ENST00000528364 SYNE2Q8WXH0 6885 aaKnown RBP7.46□□□□□ -1.22
CLNS1A-210ENST00000528364 LYRM7Q5U5X0 104 aa7.45□□□□□ -1.22
CLNS1A-210ENST00000528364 WFDC13Q8IUB5 93 aa7.45□□□□□ -1.22
CLNS1A-210ENST00000528364 IGKV3D-7A0A0C4DH55 119 aa7.44□□□□□ -1.22
CLNS1A-210ENST00000528364 A8MWP4 228 aa7.42□□□□□ -1.22
CLNS1A-210ENST00000528364 C21orf62-AS1Q17RA5 79 aa7.42□□□□□ -1.22
CLNS1A-210ENST00000528364 KRTAP19-6Q3LI70 58 aa7.42□□□□□ -1.22
CLNS1A-210ENST00000528364 NAA38Q9BRA0 125 aaKnown RBP7.42□□□□□ -1.22
CLNS1A-210ENST00000528364 MACF1Q9UPN3 7388 aaKnown RBP7.42□□□□□ -1.22
CLNS1A-210ENST00000528364 BATFQ16520 125 aa7.41□□□□□ -1.22
CLNS1A-210ENST00000528364 Q6ZVQ6 151 aa7.39□□□□□ -1.23
CLNS1A-210ENST00000528364 LOC110117498A0A087WWA1 95 aa7.37□□□□□ -1.23
CLNS1A-210ENST00000528364 JMJD7-PLA2G4BH0Y9G9 81 aa7.36□□□□□ -1.23
CLNS1A-210ENST00000528364 ATXN8Q156A1 80 aa7.36□□□□□ -1.23
CLNS1A-210ENST00000528364 C14orf132Q9NPU4 83 aa7.36□□□□□ -1.23
CLNS1A-210ENST00000528364 LINC00846Q9NV44 126 aa7.36□□□□□ -1.23
CLNS1A-210ENST00000528364 PRR15Q8IV56 129 aa7.35□□□□□ -1.23
CLNS1A-210ENST00000528364 A0A1B0GW54 56 aa7.33□□□□□ -1.24
CLNS1A-210ENST00000528364 MMP24-AS1A0A0U1RRL7 71 aa7.32□□□□□ -1.24
CLNS1A-210ENST00000528364 NREPQ16612 68 aa7.32□□□□□ -1.24
CLNS1A-210ENST00000528364 PDE6GP18545 87 aa7.31□□□□□ -1.24
CLNS1A-210ENST00000528364 H1FX-AS1Q4G0G2 97 aa7.31□□□□□ -1.24
CLNS1A-210ENST00000528364 MRPL34Q9BQ48 92 aaKnown RBP7.31□□□□□ -1.24
CLNS1A-210ENST00000528364 TMEM254Q8TBM7 123 aa7.3□□□□□ -1.24
CLNS1A-210ENST00000528364 COL5A1-AS1Q5SY13 56 aa7.28□□□□□ -1.24
CLNS1A-210ENST00000528364 C9orf118A6NHY6 69 aa7.26□□□□□ -1.25
CLNS1A-210ENST00000528364 PCP4L1A6NKN8 68 aa7.26□□□□□ -1.25
CLNS1A-210ENST00000528364 NDUFS5O43920 106 aa7.26□□□□□ -1.25
CLNS1A-210ENST00000528364 hDV103S1A0JD37 113 aa7.25□□□□□ -1.25
CLNS1A-210ENST00000528364 K7EQZ3 153 aa7.25□□□□□ -1.25
CLNS1A-210ENST00000528364 Q5W150 140 aa7.25□□□□□ -1.25
CLNS1A-210ENST00000528364 IGKV2D-30A0A075B6S6 120 aa7.24□□□□□ -1.25
CLNS1A-210ENST00000528364 IGKV2-30P06310 120 aa7.24□□□□□ -1.25
CLNS1A-210ENST00000528364 A0A1W2PPM0 123 aa7.2□□□□□ -1.26
CLNS1A-210ENST00000528364 KRTAP6-3Q3LI67 103 aa7.2□□□□□ -1.26
CLNS1A-210ENST00000528364 TAX1BP3O14907 124 aa7.18□□□□□ -1.26
CLNS1A-210ENST00000528364 GTF2H5Q6ZYL4 71 aa7.17□□□□□ -1.26
CLNS1A-210ENST00000528364 SPCS1Q9Y6A9 102 aa7.16□□□□□ -1.26
CLNS1A-210ENST00000528364 BPY2O14599 106 aa7.15□□□□□ -1.26
CLNS1A-210ENST00000528364 C4orf26Q17RF5 130 aa7.15□□□□□ -1.26
CLNS1A-210ENST00000528364 C7orf65Q6ZTY9 151 aa7.15□□□□□ -1.26
CLNS1A-210ENST00000528364 Q8N9L7 120 aa7.15□□□□□ -1.26
CLNS1A-210ENST00000528364 H3BT86 120 aa7.14□□□□□ -1.27
CLNS1A-210ENST00000528364 HCG22E2RYF7 251 aa7.11□□□□□ -1.27
CLNS1A-210ENST00000528364 CASC2Q6XLA1 102 aa7.1□□□□□ -1.27
CLNS1A-210ENST00000528364 C5orf47Q569G3 176 aa7.09□□□□□ -1.27
CLNS1A-210ENST00000528364 KRTAP3-1Q9BYR8 98 aa7.07□□□□□ -1.28
CLNS1A-210ENST00000528364 K7EP34 96 aa7.06□□□□□ -1.28
CLNS1A-210ENST00000528364 F8W1H4 67 aa7.04□□□□□ -1.28
CLNS1A-210ENST00000528364 MT1BP07438 61 aa7.04□□□□□ -1.28
CLNS1A-210ENST00000528364 NEBP20929 6669 aa7.03□□□□□ -1.28
CLNS1A-210ENST00000528364 FAM236AA0A1B0GUQ0 79 aa7.03□□□□□ -1.28
CLNS1A-210ENST00000528364 FAM236BA0A1B0GV22 79 aa7.03□□□□□ -1.28
CLNS1A-210ENST00000528364 CXCL6P80162 114 aa7.02□□□□□ -1.29
CLNS1A-210ENST00000528364 A6NN06 94 aa7□□□□□ -1.29
CLNS1A-210ENST00000528364 SMCPP49901 116 aaPredicted RBP6.99□□□□□ -1.29
CLNS1A-210ENST00000528364 S4R3F8 94 aa6.98□□□□□ -1.29
CLNS1A-210ENST00000528364 C1orf64Q8NEQ6 169 aa6.97□□□□□ -1.29
CLNS1A-210ENST00000528364 KRTAP19-8Q3LI54 63 aa6.96□□□□□ -1.3
CLNS1A-210ENST00000528364 Q5VV11 94 aa6.96□□□□□ -1.3
CLNS1A-210ENST00000528364 CSAG1Q6PB30 78 aa6.96□□□□□ -1.3
CLNS1A-210ENST00000528364 LCA10Q71F78 164 aa6.96□□□□□ -1.3
CLNS1A-210ENST00000528364 SPRR2GQ9BYE4 73 aa6.95□□□□□ -1.3
CLNS1A-210ENST00000528364 UBL5Q9BZL1 73 aa6.93□□□□□ -1.3
CLNS1A-210ENST00000528364 MUC12Q9UKN1 5478 aa6.9□□□□□ -1.31
CLNS1A-210ENST00000528364 KRTAP10-5P60370 271 aa6.89□□□□□ -1.31
CLNS1A-210ENST00000528364 PRO0461Q9UI25 63 aa6.87□□□□□ -1.31
CLNS1A-210ENST00000528364 ACYP1P07311 99 aa6.86□□□□□ -1.31
CLNS1A-210ENST00000528364 KLKP1Q107X0 134 aa6.86□□□□□ -1.31
CLNS1A-210ENST00000528364 ETDBQ3ZM63 59 aa6.86□□□□□ -1.31
CLNS1A-210ENST00000528364 A0A087WVE0 104 aa6.83□□□□□ -1.32
CLNS1A-210ENST00000528364 J3QR89 54 aa6.82□□□□□ -1.32
CLNS1A-210ENST00000528364 TP53AIP1Q9HCN2 124 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms