RNA–Protein interactions for RNA: ENST00000527823.5

USP48-212, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-212ENST00000527823 APOC3P02656 99 aa3.7□□□□□ -1.82
USP48-212ENST00000527823 LCE3EQ5T5B0 92 aa3.7□□□□□ -1.82
USP48-212ENST00000527823 LINC01545Q5VT33 79 aa3.7□□□□□ -1.82
USP48-212ENST00000527823 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.7□□□□□ -1.82
USP48-212ENST00000527823 SCGB1D4Q6XE38 83 aa3.7□□□□□ -1.82
USP48-212ENST00000527823 TEN1Q86WV5 123 aa3.7□□□□□ -1.82
USP48-212ENST00000527823 PPDPFLQ8WWR9 84 aa3.7□□□□□ -1.82
USP48-212ENST00000527823 WFDC13Q8IUB5 93 aa3.69□□□□□ -1.82
USP48-212ENST00000527823 COPS9Q8WXC6 57 aa3.69□□□□□ -1.82
USP48-212ENST00000527823 SNAPINO95295 136 aa3.68□□□□□ -1.82
USP48-212ENST00000527823 SPINK7P58062 85 aa3.68□□□□□ -1.82
USP48-212ENST00000527823 SNHG12Q9BXW3 62 aa3.68□□□□□ -1.82
USP48-212ENST00000527823 GPR98Q8WXG9 6306 aa3.68□□□□□ -1.82
USP48-212ENST00000527823 VAMP3Q15836 100 aa3.67□□□□□ -1.82
USP48-212ENST00000527823 SVBPQ8N300 66 aa3.67□□□□□ -1.82
USP48-212ENST00000527823 A0A1W2PNM2 257 aa3.66□□□□□ -1.82
USP48-212ENST00000527823 IGKV4-1P06312 121 aa3.66□□□□□ -1.82
USP48-212ENST00000527823 ZCCHC13Q8WW36 166 aaKnown RBP3.66□□□□□ -1.82
USP48-212ENST00000527823 IGHV6-1A0A0B4J1U7 121 aa3.64□□□□□ -1.83
USP48-212ENST00000527823 SPRR2EP22531 72 aa3.63□□□□□ -1.83
USP48-212ENST00000527823 SPRR2BP35325 72 aa3.63□□□□□ -1.83
USP48-212ENST00000527823 SPRR2AP35326 72 aa3.63□□□□□ -1.83
USP48-212ENST00000527823 NDUFA5Q16718 116 aa3.63□□□□□ -1.83
USP48-212ENST00000527823 DEFB116Q30KQ4 102 aa3.63□□□□□ -1.83
USP48-212ENST00000527823 Q5VV11 94 aa3.63□□□□□ -1.83
USP48-212ENST00000527823 KRTAP19-8Q3LI54 63 aa3.62□□□□□ -1.83
USP48-212ENST00000527823 CEND1Q8N111 149 aa3.62□□□□□ -1.83
USP48-212ENST00000527823 KRTAP2-1Q9BYU5 128 aa3.62□□□□□ -1.83
USP48-212ENST00000527823 C3orf79P0CE67 100 aa3.61□□□□□ -1.83
USP48-212ENST00000527823 BVES-AS1Q5T3Y7 98 aa3.61□□□□□ -1.83
USP48-212ENST00000527823 LINC00472Q9H8W2 130 aa3.61□□□□□ -1.83
USP48-212ENST00000527823 KRTAP12-2P59991 146 aa3.6□□□□□ -1.83
USP48-212ENST00000527823 SPRR2FQ96RM1 72 aa3.6□□□□□ -1.83
USP48-212ENST00000527823 C12orf57Q99622 126 aa3.6□□□□□ -1.83
USP48-212ENST00000527823 C8orf87E5RJ46 101 aa3.59□□□□□ -1.83
USP48-212ENST00000527823 H3BMG7 143 aa3.59□□□□□ -1.83
USP48-212ENST00000527823 ATOH7Q8N100 152 aa3.59□□□□□ -1.83
USP48-212ENST00000527823 A0A1B0GVX0 72 aa3.58□□□□□ -1.84
USP48-212ENST00000527823 H1FX-AS1Q4G0G2 97 aa3.58□□□□□ -1.84
USP48-212ENST00000527823 TRBV7-4A0A0J9YYF1 115 aa3.57□□□□□ -1.84
USP48-212ENST00000527823 RAB37Q96AX2 223 aa3.57□□□□□ -1.84
USP48-212ENST00000527823 SPRR2GQ9BYE4 73 aa3.57□□□□□ -1.84
USP48-212ENST00000527823 KRTDAPP60985 99 aa3.56□□□□□ -1.84
USP48-212ENST00000527823 A0A1B0GV72 72 aa3.55□□□□□ -1.84
USP48-212ENST00000527823 HIST1H2BKO60814 126 aa3.55□□□□□ -1.84
USP48-212ENST00000527823 HIST1H2BJP06899 126 aa3.55□□□□□ -1.84
USP48-212ENST00000527823 HIST1H2BOP23527 126 aa3.55□□□□□ -1.84
USP48-212ENST00000527823 HIST1H2BBP33778 126 aa3.55□□□□□ -1.84
USP48-212ENST00000527823 HIST1H2BDP58876 126 aa3.55□□□□□ -1.84
USP48-212ENST00000527823 HIST1H2BCP62807 126 aa3.55□□□□□ -1.84
USP48-212ENST00000527823 HIST2H2BEQ16778 126 aa3.55□□□□□ -1.84
USP48-212ENST00000527823 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.55□□□□□ -1.84
USP48-212ENST00000527823 HIST1H2BHQ93079 126 aa3.55□□□□□ -1.84
USP48-212ENST00000527823 HIST1H2BNQ99877 126 aa3.55□□□□□ -1.84
USP48-212ENST00000527823 HIST1H2BMQ99879 126 aa3.55□□□□□ -1.84
USP48-212ENST00000527823 FAM236AA0A1B0GUQ0 79 aa3.53□□□□□ -1.84
USP48-212ENST00000527823 FAM236BA0A1B0GV22 79 aa3.53□□□□□ -1.84
USP48-212ENST00000527823 FABP2P12104 132 aa3.53□□□□□ -1.84
USP48-212ENST00000527823 TRACP01848 142 aa3.51□□□□□ -1.85
USP48-212ENST00000527823 CCKP06307 115 aa3.51□□□□□ -1.85
USP48-212ENST00000527823 SPRR2DP22532 72 aa3.51□□□□□ -1.85
USP48-212ENST00000527823 ANKRD29Q8N6D5 301 aa3.51□□□□□ -1.85
USP48-212ENST00000527823 IGKV3D-7A0A0C4DH55 119 aa3.49□□□□□ -1.85
USP48-212ENST00000527823 H0YGX0 51 aa3.49□□□□□ -1.85
USP48-212ENST00000527823 C5orf47Q569G3 176 aa3.48□□□□□ -1.85
USP48-212ENST00000527823 LYRM7Q5U5X0 104 aa3.48□□□□□ -1.85
USP48-212ENST00000527823 DSCR8Q96T75 97 aa3.48□□□□□ -1.85
USP48-212ENST00000527823 A0A1B0GX51 115 aa3.47□□□□□ -1.85
USP48-212ENST00000527823 SNCGO76070 127 aa3.47□□□□□ -1.85
USP48-212ENST00000527823 COA6Q5JTJ3 125 aaKnown RBP3.47□□□□□ -1.85
USP48-212ENST00000527823 IMUPQ9GZP8 106 aa3.47□□□□□ -1.85
USP48-212ENST00000527823 C8orf17Q9NRJ1 99 aa3.47□□□□□ -1.85
USP48-212ENST00000527823 HIST1H4GQ99525 98 aa3.46□□□□□ -1.86
USP48-212ENST00000527823 A0A0B4J2C4 111 aa3.45□□□□□ -1.86
USP48-212ENST00000527823 KRTAP8-1Q8IUC2 63 aa3.45□□□□□ -1.86
USP48-212ENST00000527823 VPS25Q9BRG1 176 aa3.45□□□□□ -1.86
USP48-212ENST00000527823 J3KT08 172 aa3.44□□□□□ -1.86
USP48-212ENST00000527823 KLKP1Q107X0 134 aa3.43□□□□□ -1.86
USP48-212ENST00000527823 ORMDL1Q9P0S3 153 aa3.43□□□□□ -1.86
USP48-212ENST00000527823 DSTQ03001 7570 aaKnown RBP3.42□□□□□ -1.86
USP48-212ENST00000527823 KRTAP5-1Q6L8H4 278 aa3.42□□□□□ -1.86
USP48-212ENST00000527823 DNAL4O96015 105 aa3.41□□□□□ -1.86
USP48-212ENST00000527823 C7orf65Q6ZTY9 151 aa3.41□□□□□ -1.86
USP48-212ENST00000527823 MMP24-AS1A0A0U1RRL7 71 aa3.4□□□□□ -1.87
USP48-212ENST00000527823 HSBP1L1C9JCN9 74 aa3.4□□□□□ -1.87
USP48-212ENST00000527823 NDUFB1O75438 58 aa3.4□□□□□ -1.87
USP48-212ENST00000527823 RBM3P98179 157 aaKnown RBP3.4□□□□□ -1.87
USP48-212ENST00000527823 C4orf26Q17RF5 130 aa3.4□□□□□ -1.87
USP48-212ENST00000527823 C2orf91Q6ZV80 131 aa3.4□□□□□ -1.87
USP48-212ENST00000527823 MT1XP80297 61 aa3.39□□□□□ -1.87
USP48-212ENST00000527823 PRO0461Q9UI25 63 aa3.39□□□□□ -1.87
USP48-212ENST00000527823 TMEM256-PLSCR3K7ERE1 68 aa3.38□□□□□ -1.87
USP48-212ENST00000527823 Q6ZQT0 140 aa3.38□□□□□ -1.87
USP48-212ENST00000527823 LCA10Q71F78 164 aa3.38□□□□□ -1.87
USP48-212ENST00000527823 TMEM254Q8TBM7 123 aa3.38□□□□□ -1.87
USP48-212ENST00000527823 MRPL34Q9BQ48 92 aaKnown RBP3.38□□□□□ -1.87
USP48-212ENST00000527823 S4R3F8 94 aa3.38□□□□□ -1.87
USP48-212ENST00000527823 H3BQ85 93 aa3.37□□□□□ -1.87
USP48-212ENST00000527823 COX8AP10176 69 aa3.37□□□□□ -1.87
USP48-212ENST00000527823 Q5W150 140 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms