RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 A0A1B0GVX0 72 aa11.08□□□□□ -0.64
TRAPPC4-208ENST00000527680 MT1FP04733 61 aa11.08□□□□□ -0.64
TRAPPC4-208ENST00000527680 SSPOA2VEC9 5147 aa11.08□□□□□ -0.64
TRAPPC4-208ENST00000527680 SCGB1C2P0DMR2 95 aa11.07□□□□□ -0.64
TRAPPC4-208ENST00000527680 RBM3P98179 157 aaKnown RBP11.07□□□□□ -0.64
TRAPPC4-208ENST00000527680 DSCR8Q96T75 97 aa11.06□□□□□ -0.64
TRAPPC4-208ENST00000527680 LCE2BO14633 110 aa11.02□□□□□ -0.65
TRAPPC4-208ENST00000527680 ZCCHC13Q8WW36 166 aaKnown RBP11.01□□□□□ -0.65
TRAPPC4-208ENST00000527680 PYY3Q5JQD4 70 aa11□□□□□ -0.65
TRAPPC4-208ENST00000527680 KRTAP9-3Q9BYQ3 159 aa11□□□□□ -0.65
TRAPPC4-208ENST00000527680 J3KT08 172 aa10.99□□□□□ -0.65
TRAPPC4-208ENST00000527680 SPINK7P58062 85 aa10.99□□□□□ -0.65
TRAPPC4-208ENST00000527680 C9JAW5 83 aa10.98□□□□□ -0.65
TRAPPC4-208ENST00000527680 KRTAP19-1Q8IUB9 90 aa10.98□□□□□ -0.65
TRAPPC4-208ENST00000527680 NDUFB1O75438 58 aa10.96□□□□□ -0.65
TRAPPC4-208ENST00000527680 BAALC-AS2P0C853 105 aa10.96□□□□□ -0.65
TRAPPC4-208ENST00000527680 C21orf62-AS1Q17RA5 79 aa10.96□□□□□ -0.65
TRAPPC4-208ENST00000527680 UQCR10Q9UDW1 63 aa10.96□□□□□ -0.65
TRAPPC4-208ENST00000527680 LYRM7Q5U5X0 104 aa10.95□□□□□ -0.66
TRAPPC4-208ENST00000527680 Q6ZQT0 140 aa10.92□□□□□ -0.66
TRAPPC4-208ENST00000527680 FCGBPQ9Y6R7 5405 aaPredicted RBP10.92□□□□□ -0.66
TRAPPC4-208ENST00000527680 Q8N9P0 234 aaPredicted RBP10.87□□□□□ -0.67
TRAPPC4-208ENST00000527680 WFDC13Q8IUB5 93 aa10.84□□□□□ -0.67
TRAPPC4-208ENST00000527680 C8orf17Q9NRJ1 99 aa10.84□□□□□ -0.67
TRAPPC4-208ENST00000527680 LINC00846Q9NV44 126 aa10.83□□□□□ -0.68
TRAPPC4-208ENST00000527680 A8MWP4 228 aa10.82□□□□□ -0.68
TRAPPC4-208ENST00000527680 JMJD7-PLA2G4BH0Y9G9 81 aa10.8□□□□□ -0.68
TRAPPC4-208ENST00000527680 ATXN8Q156A1 80 aa10.78□□□□□ -0.68
TRAPPC4-208ENST00000527680 IGKV3D-7A0A0C4DH55 119 aa10.77□□□□□ -0.69
TRAPPC4-208ENST00000527680 Q6ZVQ6 151 aa10.77□□□□□ -0.69
TRAPPC4-208ENST00000527680 A0A1B0GW54 56 aa10.76□□□□□ -0.69
TRAPPC4-208ENST00000527680 LOC110117498A0A087WWA1 95 aa10.74□□□□□ -0.69
TRAPPC4-208ENST00000527680 PDE6GP18545 87 aa10.74□□□□□ -0.69
TRAPPC4-208ENST00000527680 NAA38Q9BRA0 125 aaKnown RBP10.74□□□□□ -0.69
TRAPPC4-208ENST00000527680 TMA7Q9Y2S6 64 aaKnown RBP10.74□□□□□ -0.69
TRAPPC4-208ENST00000527680 C14orf132Q9NPU4 83 aa10.71□□□□□ -0.69
TRAPPC4-208ENST00000527680 NREPQ16612 68 aa10.7□□□□□ -0.7
TRAPPC4-208ENST00000527680 PRR15Q8IV56 129 aa10.7□□□□□ -0.7
TRAPPC4-208ENST00000527680 MACF1Q9UPN3 7388 aaKnown RBP10.68□□□□□ -0.7
TRAPPC4-208ENST00000527680 M0R143 59 aa10.67□□□□□ -0.7
TRAPPC4-208ENST00000527680 KRTAP19-6Q3LI70 58 aa10.67□□□□□ -0.7
TRAPPC4-208ENST00000527680 MRPL34Q9BQ48 92 aaKnown RBP10.65□□□□□ -0.7
TRAPPC4-208ENST00000527680 SYNE2Q8WXH0 6885 aaKnown RBP10.65□□□□□ -0.71
TRAPPC4-208ENST00000527680 NDUFS5O43920 106 aa10.64□□□□□ -0.71
TRAPPC4-208ENST00000527680 H1FX-AS1Q4G0G2 97 aa10.63□□□□□ -0.71
TRAPPC4-208ENST00000527680 TMEM254Q8TBM7 123 aa10.63□□□□□ -0.71
TRAPPC4-208ENST00000527680 MMP24-AS1A0A0U1RRL7 71 aa10.6□□□□□ -0.71
TRAPPC4-208ENST00000527680 hDV103S1A0JD37 113 aa10.59□□□□□ -0.71
TRAPPC4-208ENST00000527680 IGKV2D-30A0A075B6S6 120 aa10.54□□□□□ -0.72
TRAPPC4-208ENST00000527680 K7EQZ3 153 aa10.54□□□□□ -0.72
TRAPPC4-208ENST00000527680 IGKV2-30P06310 120 aa10.54□□□□□ -0.72
TRAPPC4-208ENST00000527680 BPY2O14599 106 aa10.47□□□□□ -0.73
TRAPPC4-208ENST00000527680 C7orf65Q6ZTY9 151 aa10.46□□□□□ -0.73
TRAPPC4-208ENST00000527680 BATFQ16520 125 aa10.45□□□□□ -0.74
TRAPPC4-208ENST00000527680 Q5W150 140 aa10.44□□□□□ -0.74
TRAPPC4-208ENST00000527680 H3BT86 120 aa10.39□□□□□ -0.75
TRAPPC4-208ENST00000527680 TSTD3H0UI37 97 aa10.38□□□□□ -0.75
TRAPPC4-208ENST00000527680 CASC2Q6XLA1 102 aa10.38□□□□□ -0.75
TRAPPC4-208ENST00000527680 HCG22E2RYF7 251 aa10.37□□□□□ -0.75
TRAPPC4-208ENST00000527680 C4orf26Q17RF5 130 aa10.37□□□□□ -0.75
TRAPPC4-208ENST00000527680 KRTAP6-3Q3LI67 103 aa10.35□□□□□ -0.75
TRAPPC4-208ENST00000527680 Q8N9L7 120 aa10.35□□□□□ -0.75
TRAPPC4-208ENST00000527680 C9orf118A6NHY6 69 aa10.32□□□□□ -0.76
TRAPPC4-208ENST00000527680 SMIM6P0DI80 62 aa10.31□□□□□ -0.76
TRAPPC4-208ENST00000527680 FAM236AA0A1B0GUQ0 79 aa10.29□□□□□ -0.76
TRAPPC4-208ENST00000527680 FAM236BA0A1B0GV22 79 aa10.29□□□□□ -0.76
TRAPPC4-208ENST00000527680 C5orf47Q569G3 176 aa10.29□□□□□ -0.76
TRAPPC4-208ENST00000527680 A0A1W2PPM0 123 aa10.28□□□□□ -0.76
TRAPPC4-208ENST00000527680 CXCL6P80162 114 aa10.28□□□□□ -0.76
TRAPPC4-208ENST00000527680 TAX1BP3O14907 124 aa10.23□□□□□ -0.77
TRAPPC4-208ENST00000527680 S4R3F8 94 aa10.18□□□□□ -0.78
TRAPPC4-208ENST00000527680 A6NN06 94 aa10.17□□□□□ -0.78
TRAPPC4-208ENST00000527680 CSAG1Q6PB30 78 aa10.17□□□□□ -0.78
TRAPPC4-208ENST00000527680 C1orf64Q8NEQ6 169 aa10.15□□□□□ -0.78
TRAPPC4-208ENST00000527680 UBL5Q9BZL1 73 aa10.15□□□□□ -0.78
TRAPPC4-208ENST00000527680 KRTAP3-1Q9BYR8 98 aa10.14□□□□□ -0.79
TRAPPC4-208ENST00000527680 SPCS1Q9Y6A9 102 aa10.13□□□□□ -0.79
TRAPPC4-208ENST00000527680 Q5VV11 94 aa10.12□□□□□ -0.79
TRAPPC4-208ENST00000527680 LCA10Q71F78 164 aa10.09□□□□□ -0.79
TRAPPC4-208ENST00000527680 SMCPP49901 116 aaPredicted RBP10.08□□□□□ -0.8
TRAPPC4-208ENST00000527680 MT1BP07438 61 aa10.07□□□□□ -0.8
TRAPPC4-208ENST00000527680 SPRR2GQ9BYE4 73 aa10.04□□□□□ -0.8
TRAPPC4-208ENST00000527680 KRTAP19-8Q3LI54 63 aa10.01□□□□□ -0.81
TRAPPC4-208ENST00000527680 TP53AIP1Q9HCN2 124 aa10.01□□□□□ -0.81
TRAPPC4-208ENST00000527680 NEBP20929 6669 aa9.98□□□□□ -0.81
TRAPPC4-208ENST00000527680 KLKP1Q107X0 134 aa9.96□□□□□ -0.82
TRAPPC4-208ENST00000527680 KRTAP10-5P60370 271 aa9.92□□□□□ -0.82
TRAPPC4-208ENST00000527680 PRO0461Q9UI25 63 aa9.92□□□□□ -0.82
TRAPPC4-208ENST00000527680 LOC105371267A0A1B0GV96 52 aa9.88□□□□□ -0.83
TRAPPC4-208ENST00000527680 COL5A1-AS1Q5SY13 56 aa9.87□□□□□ -0.83
TRAPPC4-208ENST00000527680 KRTAP3-3Q9BYR6 98 aa9.87□□□□□ -0.83
TRAPPC4-208ENST00000527680 IMUPQ9GZP8 106 aa9.87□□□□□ -0.83
TRAPPC4-208ENST00000527680 K7EP34 96 aa9.86□□□□□ -0.83
TRAPPC4-208ENST00000527680 CYP4F30PQ9H0H9 118 aa9.86□□□□□ -0.83
TRAPPC4-208ENST00000527680 MUC12Q9UKN1 5478 aa9.85□□□□□ -0.83
TRAPPC4-208ENST00000527680 CRIPTQ9P021 101 aa9.81□□□□□ -0.84
TRAPPC4-208ENST00000527680 A0A087WVE0 104 aa9.79□□□□□ -0.84
TRAPPC4-208ENST00000527680 KRTAP20-1Q3LI63 56 aa9.75□□□□□ -0.85
TRAPPC4-208ENST00000527680 TRAV22A0A0B4J277 110 aa9.74□□□□□ -0.85
TRAPPC4-208ENST00000527680 LOC101927531A0A1B0GV80 90 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms