RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 C5orf47Q569G3 176 aa7.52□□□□□ -1.21
PVT1-220ENST00000524165 CCKP06307 115 aa7.5□□□□□ -1.21
PVT1-220ENST00000524165 J3KT08 172 aa7.49□□□□□ -1.21
PVT1-220ENST00000524165 KRTDAPP60985 99 aa7.48□□□□□ -1.21
PVT1-220ENST00000524165 ATOH7Q8N100 152 aa7.48□□□□□ -1.21
PVT1-220ENST00000524165 A0A1B0GX51 115 aa7.47□□□□□ -1.21
PVT1-220ENST00000524165 KLKP1Q107X0 134 aa7.47□□□□□ -1.21
PVT1-220ENST00000524165 A0A1B0GV72 72 aa7.44□□□□□ -1.22
PVT1-220ENST00000524165 NDUFB1O75438 58 aa7.44□□□□□ -1.22
PVT1-220ENST00000524165 C8orf17Q9NRJ1 99 aa7.44□□□□□ -1.22
PVT1-220ENST00000524165 DSTQ03001 7570 aaKnown RBP7.44□□□□□ -1.22
PVT1-220ENST00000524165 SNRPEP62304 92 aaKnown RBP7.41□□□□□ -1.22
PVT1-220ENST00000524165 HIST1H2BKO60814 126 aa7.4□□□□□ -1.22
PVT1-220ENST00000524165 HIST1H2BJP06899 126 aa7.4□□□□□ -1.22
PVT1-220ENST00000524165 HIST1H2BOP23527 126 aa7.4□□□□□ -1.22
PVT1-220ENST00000524165 HIST1H2BBP33778 126 aa7.4□□□□□ -1.22
PVT1-220ENST00000524165 HIST1H2BDP58876 126 aa7.4□□□□□ -1.22
PVT1-220ENST00000524165 HIST1H2BCP62807 126 aa7.4□□□□□ -1.22
PVT1-220ENST00000524165 HIST2H2BEQ16778 126 aa7.4□□□□□ -1.22
PVT1-220ENST00000524165 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.4□□□□□ -1.22
PVT1-220ENST00000524165 HIST1H2BHQ93079 126 aa7.4□□□□□ -1.22
PVT1-220ENST00000524165 HIST1H2BNQ99877 126 aa7.4□□□□□ -1.22
PVT1-220ENST00000524165 HIST1H2BMQ99879 126 aa7.4□□□□□ -1.22
PVT1-220ENST00000524165 CSAG1Q6PB30 78 aa7.39□□□□□ -1.23
PVT1-220ENST00000524165 C2orf91Q6ZV80 131 aa7.39□□□□□ -1.23
PVT1-220ENST00000524165 PRO2289Q9P1D8 64 aa7.39□□□□□ -1.23
PVT1-220ENST00000524165 Q6ZVQ6 151 aa7.38□□□□□ -1.23
PVT1-220ENST00000524165 H3BQ85 93 aa7.36□□□□□ -1.23
PVT1-220ENST00000524165 IGKV2D-30A0A075B6S6 120 aa7.35□□□□□ -1.23
PVT1-220ENST00000524165 IGKV2-30P06310 120 aa7.35□□□□□ -1.23
PVT1-220ENST00000524165 HIST1H4GQ99525 98 aa7.35□□□□□ -1.23
PVT1-220ENST00000524165 KRTAP12-2P59991 146 aa7.34□□□□□ -1.23
PVT1-220ENST00000524165 C7orf65Q6ZTY9 151 aa7.34□□□□□ -1.23
PVT1-220ENST00000524165 PRR15Q8IV56 129 aa7.34□□□□□ -1.23
PVT1-220ENST00000524165 VPS25Q9BRG1 176 aa7.34□□□□□ -1.23
PVT1-220ENST00000524165 CRIPTQ9P021 101 aa7.34□□□□□ -1.23
PVT1-220ENST00000524165 ORMDL1Q9P0S3 153 aa7.33□□□□□ -1.24
PVT1-220ENST00000524165 C4orf26Q17RF5 130 aa7.32□□□□□ -1.24
PVT1-220ENST00000524165 TMEM256-PLSCR3K7ERE1 68 aa7.31□□□□□ -1.24
PVT1-220ENST00000524165 C21orf62-AS1Q17RA5 79 aa7.31□□□□□ -1.24
PVT1-220ENST00000524165 S4R3F8 94 aa7.31□□□□□ -1.24
PVT1-220ENST00000524165 MT1XP80297 61 aa7.3□□□□□ -1.24
PVT1-220ENST00000524165 KRTAP4-9Q9BYQ8 210 aa7.29□□□□□ -1.24
PVT1-220ENST00000524165 A0A0B4J2C4 111 aa7.28□□□□□ -1.24
PVT1-220ENST00000524165 DNAL4O96015 105 aa7.28□□□□□ -1.24
PVT1-220ENST00000524165 MRPL34Q9BQ48 92 aaKnown RBP7.27□□□□□ -1.25
PVT1-220ENST00000524165 KRTAP4-8A0A0G2JLE6 195 aa7.26□□□□□ -1.25
PVT1-220ENST00000524165 LCA10Q71F78 164 aa7.26□□□□□ -1.25
PVT1-220ENST00000524165 KRTAP4-8Q9BYQ9 185 aa7.26□□□□□ -1.25
PVT1-220ENST00000524165 Q6ZQT0 140 aa7.25□□□□□ -1.25
PVT1-220ENST00000524165 TMEM254Q8TBM7 123 aa7.25□□□□□ -1.25
PVT1-220ENST00000524165 COA6Q5JTJ3 125 aaKnown RBP7.24□□□□□ -1.25
PVT1-220ENST00000524165 UBE2V1Q13404 147 aa7.23□□□□□ -1.25
PVT1-220ENST00000524165 HSBP1L1C9JCN9 74 aa7.22□□□□□ -1.25
PVT1-220ENST00000524165 KRTAP3-1Q9BYR8 98 aa7.21□□□□□ -1.26
PVT1-220ENST00000524165 NDUFS5O43920 106 aa7.2□□□□□ -1.26
PVT1-220ENST00000524165 RBM3P98179 157 aaKnown RBP7.2□□□□□ -1.26
PVT1-220ENST00000524165 TRIAP1O43715 76 aa7.19□□□□□ -1.26
PVT1-220ENST00000524165 MMP24-AS1A0A0U1RRL7 71 aa7.18□□□□□ -1.26
PVT1-220ENST00000524165 Q5W150 140 aa7.18□□□□□ -1.26
PVT1-220ENST00000524165 PRO1854Q9UHT4 67 aa7.16□□□□□ -1.26
PVT1-220ENST00000524165 hDV103S1A0JD37 113 aa7.13□□□□□ -1.27
PVT1-220ENST00000524165 C9JAW5 83 aa7.12□□□□□ -1.27
PVT1-220ENST00000524165 K7EQZ3 153 aa7.11□□□□□ -1.27
PVT1-220ENST00000524165 TMEM238LA0A1B0GVL6 79 aa7.09□□□□□ -1.27
PVT1-220ENST00000524165 A6NJY4 79 aa7.09□□□□□ -1.27
PVT1-220ENST00000524165 COX8AP10176 69 aa7.09□□□□□ -1.27
PVT1-220ENST00000524165 A0A1B0GW54 56 aa7.07□□□□□ -1.28
PVT1-220ENST00000524165 C1orf64Q8NEQ6 169 aa7.07□□□□□ -1.28
PVT1-220ENST00000524165 KRTAP3-3Q9BYR6 98 aa7.07□□□□□ -1.28
PVT1-220ENST00000524165 HMCN1Q96RW7 5635 aa7.06□□□□□ -1.28
PVT1-220ENST00000524165 DLEU1O43261 78 aa7.06□□□□□ -1.28
PVT1-220ENST00000524165 PLAC4Q8WY50 150 aa7.05□□□□□ -1.28
PVT1-220ENST00000524165 LCE1DQ5T752 114 aa7.04□□□□□ -1.28
PVT1-220ENST00000524165 HIGD1BQ9P298 99 aa7.03□□□□□ -1.28
PVT1-220ENST00000524165 AHNAK2Q8IVF2 5795 aa7.03□□□□□ -1.28
PVT1-220ENST00000524165 CEND1Q8N111 149 aa7.02□□□□□ -1.29
PVT1-220ENST00000524165 HIST3H2BBQ8N257 126 aa7.02□□□□□ -1.29
PVT1-220ENST00000524165 A8MUN3 132 aa7□□□□□ -1.29
PVT1-220ENST00000524165 PSMB2P49721 201 aa7□□□□□ -1.29
PVT1-220ENST00000524165 KRTAP5-10Q6L8G5 202 aa7□□□□□ -1.29
PVT1-220ENST00000524165 COX6CP09669 75 aa6.99□□□□□ -1.29
PVT1-220ENST00000524165 S100A1P23297 94 aa6.95□□□□□ -1.3
PVT1-220ENST00000524165 KRTAP10-12P60413 245 aa6.95□□□□□ -1.3
PVT1-220ENST00000524165 KRTAP10-7P60409 375 aaPredicted RBP6.94□□□□□ -1.3
PVT1-220ENST00000524165 NREPQ16612 68 aa6.94□□□□□ -1.3
PVT1-220ENST00000524165 FXYD2P54710 66 aa6.93□□□□□ -1.3
PVT1-220ENST00000524165 HIST1H2BLQ99880 126 aa6.92□□□□□ -1.3
PVT1-220ENST00000524165 LOC110117498A0A087WWA1 95 aa6.91□□□□□ -1.3
PVT1-220ENST00000524165 HCG22E2RYF7 251 aa6.91□□□□□ -1.3
PVT1-220ENST00000524165 H0YAA0 97 aa6.91□□□□□ -1.3
PVT1-220ENST00000524165 CXCL6P80162 114 aa6.91□□□□□ -1.3
PVT1-220ENST00000524165 C14orf144Q96I85 54 aa6.91□□□□□ -1.3
PVT1-220ENST00000524165 PDE6GP18545 87 aa6.9□□□□□ -1.3
PVT1-220ENST00000524165 BAALC-AS2P0C853 105 aa6.89□□□□□ -1.31
PVT1-220ENST00000524165 KRTAP5-7Q6L8G8 165 aa6.87□□□□□ -1.31
PVT1-220ENST00000524165 S100A2P29034 98 aa6.86□□□□□ -1.31
PVT1-220ENST00000524165 JMJD7-PLA2G4BH0Y9G9 81 aa6.85□□□□□ -1.31
PVT1-220ENST00000524165 MT4P47944 62 aa6.83□□□□□ -1.32
PVT1-220ENST00000524165 CASC2Q6XLA1 102 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms