RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 VPS25Q9BRG1 176 aa7.59□□□□□ -1.19
MRPS28-209ENST00000522987 A0A1B0GVX0 72 aa7.53□□□□□ -1.2
MRPS28-209ENST00000522987 TMA7Q9Y2S6 64 aaKnown RBP7.53□□□□□ -1.2
MRPS28-209ENST00000522987 TMEM256-PLSCR3K7ERE1 68 aa7.52□□□□□ -1.21
MRPS28-209ENST00000522987 SPINK7P58062 85 aa7.5□□□□□ -1.21
MRPS28-209ENST00000522987 ZCCHC13Q8WW36 166 aaKnown RBP7.5□□□□□ -1.21
MRPS28-209ENST00000522987 LOC105371267A0A1B0GV96 52 aa7.49□□□□□ -1.21
MRPS28-209ENST00000522987 C8orf87E5RJ46 101 aa7.49□□□□□ -1.21
MRPS28-209ENST00000522987 MTURNQ8N3F0 131 aa7.48□□□□□ -1.21
MRPS28-209ENST00000522987 H3BQ85 93 aa7.47□□□□□ -1.21
MRPS28-209ENST00000522987 COX6CP09669 75 aa7.47□□□□□ -1.21
MRPS28-209ENST00000522987 HSD52Q0P140 79 aa7.47□□□□□ -1.21
MRPS28-209ENST00000522987 UBE2V1Q13404 147 aa7.46□□□□□ -1.22
MRPS28-209ENST00000522987 RBM3P98179 157 aaKnown RBP7.44□□□□□ -1.22
MRPS28-209ENST00000522987 WFDC13Q8IUB5 93 aa7.43□□□□□ -1.22
MRPS28-209ENST00000522987 DSCR8Q96T75 97 aa7.43□□□□□ -1.22
MRPS28-209ENST00000522987 SCGB1C2P0DMR2 95 aa7.42□□□□□ -1.22
MRPS28-209ENST00000522987 LYRM7Q5U5X0 104 aa7.42□□□□□ -1.22
MRPS28-209ENST00000522987 SMIM6P0DI80 62 aa7.41□□□□□ -1.22
MRPS28-209ENST00000522987 Q8N9P0 234 aaPredicted RBP7.41□□□□□ -1.22
MRPS28-209ENST00000522987 MACF1Q9UPN3 7388 aaKnown RBP7.41□□□□□ -1.22
MRPS28-209ENST00000522987 KRTAP19-6Q3LI70 58 aa7.4□□□□□ -1.22
MRPS28-209ENST00000522987 SYNE2Q8WXH0 6885 aaKnown RBP7.4□□□□□ -1.22
MRPS28-209ENST00000522987 C9JAW5 83 aa7.38□□□□□ -1.23
MRPS28-209ENST00000522987 J3KT08 172 aa7.38□□□□□ -1.23
MRPS28-209ENST00000522987 PYY3Q5JQD4 70 aa7.38□□□□□ -1.23
MRPS28-209ENST00000522987 A8MWP4 228 aa7.37□□□□□ -1.23
MRPS28-209ENST00000522987 BAALC-AS2P0C853 105 aa7.37□□□□□ -1.23
MRPS28-209ENST00000522987 Q6ZQT0 140 aa7.37□□□□□ -1.23
MRPS28-209ENST00000522987 C8orf17Q9NRJ1 99 aa7.37□□□□□ -1.23
MRPS28-209ENST00000522987 LINC00846Q9NV44 126 aa7.37□□□□□ -1.23
MRPS28-209ENST00000522987 NDUFB1O75438 58 aa7.36□□□□□ -1.23
MRPS28-209ENST00000522987 IGKV3D-7A0A0C4DH55 119 aa7.32□□□□□ -1.24
MRPS28-209ENST00000522987 NAA38Q9BRA0 125 aaKnown RBP7.32□□□□□ -1.24
MRPS28-209ENST00000522987 UQCR10Q9UDW1 63 aa7.31□□□□□ -1.24
MRPS28-209ENST00000522987 Q6ZVQ6 151 aa7.3□□□□□ -1.24
MRPS28-209ENST00000522987 C21orf62-AS1Q17RA5 79 aa7.27□□□□□ -1.25
MRPS28-209ENST00000522987 C14orf132Q9NPU4 83 aa7.25□□□□□ -1.25
MRPS28-209ENST00000522987 NDUFS5O43920 106 aa7.23□□□□□ -1.25
MRPS28-209ENST00000522987 ATXN8Q156A1 80 aa7.23□□□□□ -1.25
MRPS28-209ENST00000522987 H1FX-AS1Q4G0G2 97 aa7.23□□□□□ -1.25
MRPS28-209ENST00000522987 LOC110117498A0A087WWA1 95 aa7.22□□□□□ -1.25
MRPS28-209ENST00000522987 MMP24-AS1A0A0U1RRL7 71 aa7.22□□□□□ -1.25
MRPS28-209ENST00000522987 PRR15Q8IV56 129 aa7.22□□□□□ -1.25
MRPS28-209ENST00000522987 MRPL34Q9BQ48 92 aaKnown RBP7.22□□□□□ -1.25
MRPS28-209ENST00000522987 JMJD7-PLA2G4BH0Y9G9 81 aa7.21□□□□□ -1.26
MRPS28-209ENST00000522987 IGKV2D-30A0A075B6S6 120 aa7.2□□□□□ -1.26
MRPS28-209ENST00000522987 IGKV2-30P06310 120 aa7.2□□□□□ -1.26
MRPS28-209ENST00000522987 NREPQ16612 68 aa7.2□□□□□ -1.26
MRPS28-209ENST00000522987 KRTAP6-3Q3LI67 103 aa7.19□□□□□ -1.26
MRPS28-209ENST00000522987 TMEM254Q8TBM7 123 aa7.19□□□□□ -1.26
MRPS28-209ENST00000522987 K7EQZ3 153 aa7.17□□□□□ -1.26
MRPS28-209ENST00000522987 hDV103S1A0JD37 113 aa7.16□□□□□ -1.26
MRPS28-209ENST00000522987 TSTD3H0UI37 97 aa7.16□□□□□ -1.26
MRPS28-209ENST00000522987 A0A1B0GW54 56 aa7.14□□□□□ -1.27
MRPS28-209ENST00000522987 PDE6GP18545 87 aa7.14□□□□□ -1.27
MRPS28-209ENST00000522987 Q5W150 140 aa7.13□□□□□ -1.27
MRPS28-209ENST00000522987 M0R143 59 aa7.1□□□□□ -1.27
MRPS28-209ENST00000522987 C7orf65Q6ZTY9 151 aa7.1□□□□□ -1.27
MRPS28-209ENST00000522987 C4orf26Q17RF5 130 aa7.09□□□□□ -1.27
MRPS28-209ENST00000522987 C5orf47Q569G3 176 aa7.07□□□□□ -1.28
MRPS28-209ENST00000522987 Q8N9L7 120 aa7.07□□□□□ -1.28
MRPS28-209ENST00000522987 FAM236AA0A1B0GUQ0 79 aa7.05□□□□□ -1.28
MRPS28-209ENST00000522987 FAM236BA0A1B0GV22 79 aa7.05□□□□□ -1.28
MRPS28-209ENST00000522987 HCG22E2RYF7 251 aa7.04□□□□□ -1.28
MRPS28-209ENST00000522987 BPY2O14599 106 aa7.04□□□□□ -1.28
MRPS28-209ENST00000522987 BATFQ16520 125 aa7.03□□□□□ -1.28
MRPS28-209ENST00000522987 A6NN06 94 aa7.02□□□□□ -1.29
MRPS28-209ENST00000522987 CASC2Q6XLA1 102 aa7.01□□□□□ -1.29
MRPS28-209ENST00000522987 MT1BP07438 61 aa7□□□□□ -1.29
MRPS28-209ENST00000522987 H3BT86 120 aa6.95□□□□□ -1.3
MRPS28-209ENST00000522987 Q5VV11 94 aa6.95□□□□□ -1.3
MRPS28-209ENST00000522987 KRTAP3-1Q9BYR8 98 aa6.95□□□□□ -1.3
MRPS28-209ENST00000522987 S4R3F8 94 aa6.95□□□□□ -1.3
MRPS28-209ENST00000522987 NEBP20929 6669 aa6.95□□□□□ -1.3
MRPS28-209ENST00000522987 PCP4L1A6NKN8 68 aa6.93□□□□□ -1.3
MRPS28-209ENST00000522987 MUC12Q9UKN1 5478 aa6.92□□□□□ -1.3
MRPS28-209ENST00000522987 CXCL6P80162 114 aa6.91□□□□□ -1.3
MRPS28-209ENST00000522987 LCA10Q71F78 164 aa6.9□□□□□ -1.3
MRPS28-209ENST00000522987 C9orf118A6NHY6 69 aa6.89□□□□□ -1.31
MRPS28-209ENST00000522987 KRTAP19-8Q3LI54 63 aa6.89□□□□□ -1.31
MRPS28-209ENST00000522987 COL5A1-AS1Q5SY13 56 aa6.89□□□□□ -1.31
MRPS28-209ENST00000522987 C1orf64Q8NEQ6 169 aa6.89□□□□□ -1.31
MRPS28-209ENST00000522987 A0A1W2PPM0 123 aa6.88□□□□□ -1.31
MRPS28-209ENST00000522987 CSAG1Q6PB30 78 aa6.88□□□□□ -1.31
MRPS28-209ENST00000522987 TAX1BP3O14907 124 aa6.87□□□□□ -1.31
MRPS28-209ENST00000522987 SPRR2GQ9BYE4 73 aa6.87□□□□□ -1.31
MRPS28-209ENST00000522987 KRTAP10-5P60370 271 aa6.86□□□□□ -1.31
MRPS28-209ENST00000522987 KRTAP20-1Q3LI63 56 aa6.84□□□□□ -1.31
MRPS28-209ENST00000522987 LOC100996750A0A140TA64 210 aa6.81□□□□□ -1.32
MRPS28-209ENST00000522987 KLKP1Q107X0 134 aa6.81□□□□□ -1.32
MRPS28-209ENST00000522987 KRTAP4-6Q9BYQ5 205 aa6.81□□□□□ -1.32
MRPS28-209ENST00000522987 SMCPP49901 116 aaPredicted RBP6.8□□□□□ -1.32
MRPS28-209ENST00000522987 IMUPQ9GZP8 106 aa6.78□□□□□ -1.32
MRPS28-209ENST00000522987 SPCS1Q9Y6A9 102 aa6.78□□□□□ -1.32
MRPS28-209ENST00000522987 UBL5Q9BZL1 73 aa6.77□□□□□ -1.33
MRPS28-209ENST00000522987 A0A087WVE0 104 aa6.76□□□□□ -1.33
MRPS28-209ENST00000522987 KRTAP5-9P26371 169 aa6.74□□□□□ -1.33
MRPS28-209ENST00000522987 KMT2DO14686 5537 aa6.71□□□□□ -1.34
MRPS28-209ENST00000522987 MDN1Q9NU22 5596 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms