RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 TRACP01848 142 aa4.61□□□□□ -1.67
CTNNA1-234ENST00000522227 IGKV2-30P06310 120 aa4.61□□□□□ -1.67
CTNNA1-234ENST00000522227 RBM3P98179 157 aaKnown RBP4.61□□□□□ -1.67
CTNNA1-234ENST00000522227 PRO2289Q9P1D8 64 aa4.61□□□□□ -1.67
CTNNA1-234ENST00000522227 APOC3P02656 99 aa4.6□□□□□ -1.67
CTNNA1-234ENST00000522227 MT1XP80297 61 aa4.6□□□□□ -1.67
CTNNA1-234ENST00000522227 LCA10Q71F78 164 aa4.6□□□□□ -1.67
CTNNA1-234ENST00000522227 SNCGO76070 127 aa4.59□□□□□ -1.67
CTNNA1-234ENST00000522227 CCKP06307 115 aa4.58□□□□□ -1.68
CTNNA1-234ENST00000522227 C4orf26Q17RF5 130 aa4.58□□□□□ -1.68
CTNNA1-234ENST00000522227 CSAG1Q6PB30 78 aa4.58□□□□□ -1.68
CTNNA1-234ENST00000522227 PET117Q6UWS5 81 aa4.58□□□□□ -1.68
CTNNA1-234ENST00000522227 KRTAP3-3Q9BYR6 98 aa4.58□□□□□ -1.68
CTNNA1-234ENST00000522227 KRTAP3-2Q9BYR7 98 aa4.58□□□□□ -1.68
CTNNA1-234ENST00000522227 LCE1DQ5T752 114 aa4.57□□□□□ -1.68
CTNNA1-234ENST00000522227 ATOH7Q8N100 152 aa4.57□□□□□ -1.68
CTNNA1-234ENST00000522227 VPS25Q9BRG1 176 aa4.57□□□□□ -1.68
CTNNA1-234ENST00000522227 C8orf17Q9NRJ1 99 aa4.57□□□□□ -1.68
CTNNA1-234ENST00000522227 S4R3F8 94 aa4.57□□□□□ -1.68
CTNNA1-234ENST00000522227 SNAPINO95295 136 aa4.55□□□□□ -1.68
CTNNA1-234ENST00000522227 PRR15Q8IV56 129 aa4.55□□□□□ -1.68
CTNNA1-234ENST00000522227 HMCN1Q96RW7 5635 aa4.54□□□□□ -1.68
CTNNA1-234ENST00000522227 NDUFB1O75438 58 aa4.54□□□□□ -1.68
CTNNA1-234ENST00000522227 KRTAP12-2P59991 146 aa4.54□□□□□ -1.68
CTNNA1-234ENST00000522227 AHNAK2Q8IVF2 5795 aa4.54□□□□□ -1.68
CTNNA1-234ENST00000522227 KRTAP5-10Q6L8G5 202 aa4.53□□□□□ -1.68
CTNNA1-234ENST00000522227 Q6ZVQ6 151 aa4.53□□□□□ -1.68
CTNNA1-234ENST00000522227 KRTDAPP60985 99 aa4.52□□□□□ -1.69
CTNNA1-234ENST00000522227 J3KT08 172 aa4.51□□□□□ -1.69
CTNNA1-234ENST00000522227 SVBPQ8N300 66 aa4.51□□□□□ -1.69
CTNNA1-234ENST00000522227 H0YGX0 51 aa4.5□□□□□ -1.69
CTNNA1-234ENST00000522227 NDUFS5O43920 106 aa4.5□□□□□ -1.69
CTNNA1-234ENST00000522227 MT4P47944 62 aa4.5□□□□□ -1.69
CTNNA1-234ENST00000522227 C7orf65Q6ZTY9 151 aa4.5□□□□□ -1.69
CTNNA1-234ENST00000522227 C2orf91Q6ZV80 131 aa4.5□□□□□ -1.69
CTNNA1-234ENST00000522227 NDUFA5Q16718 116 aa4.49□□□□□ -1.69
CTNNA1-234ENST00000522227 SPRR5A0A1B0GTR4 108 aa4.48□□□□□ -1.69
CTNNA1-234ENST00000522227 CRIPTQ9P021 101 aa4.47□□□□□ -1.69
CTNNA1-234ENST00000522227 KRTAP3-1Q9BYR8 98 aa4.45□□□□□ -1.7
CTNNA1-234ENST00000522227 Q5W150 140 aa4.44□□□□□ -1.7
CTNNA1-234ENST00000522227 MRPL34Q9BQ48 92 aaKnown RBP4.44□□□□□ -1.7
CTNNA1-234ENST00000522227 PLAC4Q8WY50 150 aa4.43□□□□□ -1.7
CTNNA1-234ENST00000522227 HIST1H4GQ99525 98 aa4.43□□□□□ -1.7
CTNNA1-234ENST00000522227 KRTAP10-7P60409 375 aaPredicted RBP4.42□□□□□ -1.7
CTNNA1-234ENST00000522227 KRTAP5-7Q6L8G8 165 aa4.42□□□□□ -1.7
CTNNA1-234ENST00000522227 ORMDL1Q9P0S3 153 aa4.42□□□□□ -1.7
CTNNA1-234ENST00000522227 A0A1B0GX51 115 aa4.41□□□□□ -1.7
CTNNA1-234ENST00000522227 TMEM254Q8TBM7 123 aa4.4□□□□□ -1.71
CTNNA1-234ENST00000522227 MMP24-AS1A0A0U1RRL7 71 aa4.39□□□□□ -1.71
CTNNA1-234ENST00000522227 K7EQZ3 153 aa4.39□□□□□ -1.71
CTNNA1-234ENST00000522227 DNAL4O96015 105 aa4.39□□□□□ -1.71
CTNNA1-234ENST00000522227 C1orf64Q8NEQ6 169 aa4.38□□□□□ -1.71
CTNNA1-234ENST00000522227 A8MUN3 132 aa4.37□□□□□ -1.71
CTNNA1-234ENST00000522227 Q6ZQT0 140 aa4.37□□□□□ -1.71
CTNNA1-234ENST00000522227 TMEM256-PLSCR3K7ERE1 68 aa4.36□□□□□ -1.71
CTNNA1-234ENST00000522227 HIST1H2BKO60814 126 aa4.36□□□□□ -1.71
CTNNA1-234ENST00000522227 HIST1H2BJP06899 126 aa4.36□□□□□ -1.71
CTNNA1-234ENST00000522227 HIST1H2BOP23527 126 aa4.36□□□□□ -1.71
CTNNA1-234ENST00000522227 HIST1H2BBP33778 126 aa4.36□□□□□ -1.71
CTNNA1-234ENST00000522227 HIST1H2BDP58876 126 aa4.36□□□□□ -1.71
CTNNA1-234ENST00000522227 HIST1H2BCP62807 126 aa4.36□□□□□ -1.71
CTNNA1-234ENST00000522227 HIST2H2BEQ16778 126 aa4.36□□□□□ -1.71
CTNNA1-234ENST00000522227 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.36□□□□□ -1.71
CTNNA1-234ENST00000522227 HIST1H2BHQ93079 126 aa4.36□□□□□ -1.71
CTNNA1-234ENST00000522227 HIST1H2BNQ99877 126 aa4.36□□□□□ -1.71
CTNNA1-234ENST00000522227 HIST1H2BMQ99879 126 aa4.36□□□□□ -1.71
CTNNA1-234ENST00000522227 hDV103S1A0JD37 113 aa4.35□□□□□ -1.71
CTNNA1-234ENST00000522227 PDE6GP18545 87 aa4.35□□□□□ -1.71
CTNNA1-234ENST00000522227 TRIAP1O43715 76 aa4.33□□□□□ -1.72
CTNNA1-234ENST00000522227 H3BQ85 93 aa4.32□□□□□ -1.72
CTNNA1-234ENST00000522227 KRTAP10-12P60413 245 aa4.32□□□□□ -1.72
CTNNA1-234ENST00000522227 LCE4AQ5TA78 99 aa4.32□□□□□ -1.72
CTNNA1-234ENST00000522227 A0A0B4J2C4 111 aa4.31□□□□□ -1.72
CTNNA1-234ENST00000522227 SNRPEP62304 92 aaKnown RBP4.31□□□□□ -1.72
CTNNA1-234ENST00000522227 UBE2V1Q13404 147 aa4.3□□□□□ -1.72
CTNNA1-234ENST00000522227 KRTAP5-3Q6L8H2 238 aa4.3□□□□□ -1.72
CTNNA1-234ENST00000522227 C9JAW5 83 aa4.29□□□□□ -1.72
CTNNA1-234ENST00000522227 HSBP1L1C9JCN9 74 aa4.29□□□□□ -1.72
CTNNA1-234ENST00000522227 C21orf62-AS1Q17RA5 79 aa4.29□□□□□ -1.72
CTNNA1-234ENST00000522227 LCE5AQ5TCM9 118 aa4.28□□□□□ -1.72
CTNNA1-234ENST00000522227 A0A087WVE0 104 aa4.27□□□□□ -1.73
CTNNA1-234ENST00000522227 HCG22E2RYF7 251 aa4.26□□□□□ -1.73
CTNNA1-234ENST00000522227 KRTAP4-6Q9BYQ5 205 aa4.26□□□□□ -1.73
CTNNA1-234ENST00000522227 PRO1854Q9UHT4 67 aa4.26□□□□□ -1.73
CTNNA1-234ENST00000522227 PSMB2P49721 201 aa4.25□□□□□ -1.73
CTNNA1-234ENST00000522227 CEND1Q8N111 149 aa4.25□□□□□ -1.73
CTNNA1-234ENST00000522227 TMEM238LA0A1B0GVL6 79 aa4.23□□□□□ -1.73
CTNNA1-234ENST00000522227 A6NJY4 79 aa4.23□□□□□ -1.73
CTNNA1-234ENST00000522227 ADM2Q7Z4H4 148 aa4.23□□□□□ -1.73
CTNNA1-234ENST00000522227 KRTAP19-3Q7Z4W3 81 aa4.21□□□□□ -1.74
CTNNA1-234ENST00000522227 NREPQ16612 68 aa4.2□□□□□ -1.74
CTNNA1-234ENST00000522227 CYSTM1Q9H1C7 97 aa4.2□□□□□ -1.74
CTNNA1-234ENST00000522227 COX8AP10176 69 aa4.18□□□□□ -1.74
CTNNA1-234ENST00000522227 H0YAA0 97 aa4.17□□□□□ -1.74
CTNNA1-234ENST00000522227 COA6Q5JTJ3 125 aaKnown RBP4.17□□□□□ -1.74
CTNNA1-234ENST00000522227 CASC2Q6XLA1 102 aa4.17□□□□□ -1.74
CTNNA1-234ENST00000522227 COX6CP09669 75 aa4.16□□□□□ -1.74
CTNNA1-234ENST00000522227 LINC01554Q52M75 96 aa4.16□□□□□ -1.74
CTNNA1-234ENST00000522227 BAALC-AS2P0C853 105 aa4.15□□□□□ -1.75
CTNNA1-234ENST00000522227 FXYD2P54710 66 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms