RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 NREPQ16612 68 aa12.13□□□□□ -0.47
SKP1-206ENST00000519321 Q75L30 129 aa12.13□□□□□ -0.47
SKP1-206ENST00000519321 IGHV6-1A0A0B4J1U7 121 aa12.1□□□□□ -0.47
SKP1-206ENST00000519321 NDUFB1O75438 58 aa12.1□□□□□ -0.47
SKP1-206ENST00000519321 A0A1B0GVX0 72 aa12.09□□□□□ -0.47
SKP1-206ENST00000519321 C8orf87E5RJ46 101 aa12.09□□□□□ -0.47
SKP1-206ENST00000519321 C20orf166-AS1Q96NR2 134 aa12.08□□□□□ -0.48
SKP1-206ENST00000519321 ATP11AUNQ6ZP68 121 aa12.06□□□□□ -0.48
SKP1-206ENST00000519321 MUC2Q02817 5179 aa12.05□□□□□ -0.48
SKP1-206ENST00000519321 A8MUU9 505 aa12.05□□□□□ -0.48
SKP1-206ENST00000519321 A8MWP4 228 aa12.04□□□□□ -0.48
SKP1-206ENST00000519321 KRTAP4-1Q9BYQ7 146 aa12.04□□□□□ -0.48
SKP1-206ENST00000519321 NOTCH2NLQ7Z3S9 236 aa12.01□□□□□ -0.49
SKP1-206ENST00000519321 KRTAP16-1A8MUX0 517 aa12□□□□□ -0.49
SKP1-206ENST00000519321 ETDBQ3ZM63 59 aa11.98□□□□□ -0.49
SKP1-206ENST00000519321 IGKV3D-7A0A0C4DH55 119 aa11.95□□□□□ -0.5
SKP1-206ENST00000519321 Q6ZVQ6 151 aa11.95□□□□□ -0.5
SKP1-206ENST00000519321 BPY2O14599 106 aa11.94□□□□□ -0.5
SKP1-206ENST00000519321 PRR15Q8IV56 129 aa11.94□□□□□ -0.5
SKP1-206ENST00000519321 UBL5Q9BZL1 73 aa11.93□□□□□ -0.5
SKP1-206ENST00000519321 C8orf17Q9NRJ1 99 aa11.92□□□□□ -0.5
SKP1-206ENST00000519321 LINC00846Q9NV44 126 aa11.89□□□□□ -0.51
SKP1-206ENST00000519321 K7EQZ3 153 aa11.85□□□□□ -0.51
SKP1-206ENST00000519321 A0A1B0GV90 55 aa11.84□□□□□ -0.51
SKP1-206ENST00000519321 Q8N9P0 234 aaPredicted RBP11.82□□□□□ -0.52
SKP1-206ENST00000519321 MMP24-AS1A0A0U1RRL7 71 aa11.8□□□□□ -0.52
SKP1-206ENST00000519321 TMEM254Q8TBM7 123 aa11.79□□□□□ -0.52
SKP1-206ENST00000519321 ACYP1P07311 99 aa11.77□□□□□ -0.53
SKP1-206ENST00000519321 MRPL34Q9BQ48 92 aaKnown RBP11.77□□□□□ -0.53
SKP1-206ENST00000519321 FAT4Q6V0I7 4981 aa11.76□□□□□ -0.53
SKP1-206ENST00000519321 hDV103S1A0JD37 113 aa11.76□□□□□ -0.53
SKP1-206ENST00000519321 ZCCHC13Q8WW36 166 aaKnown RBP11.74□□□□□ -0.53
SKP1-206ENST00000519321 Q8N9L7 120 aa11.72□□□□□ -0.53
SKP1-206ENST00000519321 FAM240AA0A1B0GVK7 77 aa11.71□□□□□ -0.53
SKP1-206ENST00000519321 LCE2AQ5TA79 106 aaPredicted RBP11.71□□□□□ -0.53
SKP1-206ENST00000519321 CXCL6P80162 114 aa11.7□□□□□ -0.54
SKP1-206ENST00000519321 KRTAP19-2Q3LHN2 52 aa11.7□□□□□ -0.54
SKP1-206ENST00000519321 CASC2Q6XLA1 102 aa11.67□□□□□ -0.54
SKP1-206ENST00000519321 LCE2CQ5TA81 110 aa11.66□□□□□ -0.54
SKP1-206ENST00000519321 COX6B2Q6YFQ2 88 aa11.66□□□□□ -0.54
SKP1-206ENST00000519321 NDUFS5O43920 106 aa11.65□□□□□ -0.54
SKP1-206ENST00000519321 WFDC13Q8IUB5 93 aa11.65□□□□□ -0.54
SKP1-206ENST00000519321 HCG22E2RYF7 251 aa11.61□□□□□ -0.55
SKP1-206ENST00000519321 ATP5EP2Q5VTU8 51 aa11.57□□□□□ -0.56
SKP1-206ENST00000519321 SPINK7P58062 85 aa11.55□□□□□ -0.56
SKP1-206ENST00000519321 J3QR89 54 aa11.53□□□□□ -0.56
SKP1-206ENST00000519321 MT1HP80294 61 aa11.52□□□□□ -0.57
SKP1-206ENST00000519321 RBM12B-AS1Q9P1G2 102 aa11.52□□□□□ -0.57
SKP1-206ENST00000519321 HRES1P13985 223 aa11.51□□□□□ -0.57
SKP1-206ENST00000519321 LINC00643Q86TS7 51 aa11.48□□□□□ -0.57
SKP1-206ENST00000519321 MPLKIPQ8TAP9 179 aa11.47□□□□□ -0.57
SKP1-206ENST00000519321 FAM236DA0A1B0GTK5 79 aa11.46□□□□□ -0.57
SKP1-206ENST00000519321 FAM236CP0DP71 79 aa11.46□□□□□ -0.57
SKP1-206ENST00000519321 Q5W150 140 aa11.43□□□□□ -0.58
SKP1-206ENST00000519321 TP53AIP1Q9HCN2 124 aa11.43□□□□□ -0.58
SKP1-206ENST00000519321 M0R2T5 61 aa11.4□□□□□ -0.58
SKP1-206ENST00000519321 HIST1H4AP62805 103 aaKnown RBP11.4□□□□□ -0.58
SKP1-206ENST00000519321 C7orf65Q6ZTY9 151 aa11.37□□□□□ -0.59
SKP1-206ENST00000519321 IGKV2D-30A0A075B6S6 120 aa11.35□□□□□ -0.59
SKP1-206ENST00000519321 IGKV2-30P06310 120 aa11.35□□□□□ -0.59
SKP1-206ENST00000519321 FLGP20930 4061 aaPredicted RBP11.27□□□□□ -0.6
SKP1-206ENST00000519321 K7ERU9 68 aa11.25□□□□□ -0.61
SKP1-206ENST00000519321 KRTAP10-6P60371 365 aaPredicted RBP11.24□□□□□ -0.61
SKP1-206ENST00000519321 A0A087WVE0 104 aa11.23□□□□□ -0.61
SKP1-206ENST00000519321 LORP23490 312 aaPredicted RBP11.21□□□□□ -0.61
SKP1-206ENST00000519321 TRAV22A0A0B4J277 110 aa11.18□□□□□ -0.62
SKP1-206ENST00000519321 UQCRQO14949 82 aa11.18□□□□□ -0.62
SKP1-206ENST00000519321 H1FX-AS1Q4G0G2 97 aa11.12□□□□□ -0.63
SKP1-206ENST00000519321 LOC101927531A0A1B0GV80 90 aa11.1□□□□□ -0.63
SKP1-206ENST00000519321 ATOX1O00244 68 aa11.1□□□□□ -0.63
SKP1-206ENST00000519321 C4orf26Q17RF5 130 aa11.1□□□□□ -0.63
SKP1-206ENST00000519321 IMUPQ9GZP8 106 aa11.08□□□□□ -0.64
SKP1-206ENST00000519321 CYP4F30PQ9H0H9 118 aa11.07□□□□□ -0.64
SKP1-206ENST00000519321 H0Y9P7 68 aa11.06□□□□□ -0.64
SKP1-206ENST00000519321 KRTAP9-2Q9BYQ4 174 aa11.04□□□□□ -0.64
SKP1-206ENST00000519321 OCR1Q9BZK8 76 aa11.03□□□□□ -0.64
SKP1-206ENST00000519321 SCGB1A1P11684 91 aa11.01□□□□□ -0.65
SKP1-206ENST00000519321 LCE2DQ5TA82 110 aaPredicted RBP11.01□□□□□ -0.65
SKP1-206ENST00000519321 MT-ATP8P03928 68 aa10.98□□□□□ -0.65
SKP1-206ENST00000519321 C1orf64Q8NEQ6 169 aa10.98□□□□□ -0.65
SKP1-206ENST00000519321 MP68P56378 58 aa10.97□□□□□ -0.65
SKP1-206ENST00000519321 KRTAP9-8Q9BYQ0 159 aa10.96□□□□□ -0.65
SKP1-206ENST00000519321 C5orf47Q569G3 176 aa10.95□□□□□ -0.66
SKP1-206ENST00000519321 LINC00208Q96KT6 92 aa10.92□□□□□ -0.66
SKP1-206ENST00000519321 KRTAP3-1Q9BYR8 98 aa10.91□□□□□ -0.66
SKP1-206ENST00000519321 H3BPC8 53 aa10.88□□□□□ -0.67
SKP1-206ENST00000519321 MT2AP02795 61 aa10.84□□□□□ -0.67
SKP1-206ENST00000519321 SMIM20Q8N5G0 67 aa10.84□□□□□ -0.67
SKP1-206ENST00000519321 FAM236AA0A1B0GUQ0 79 aa10.82□□□□□ -0.68
SKP1-206ENST00000519321 FAM236BA0A1B0GV22 79 aa10.82□□□□□ -0.68
SKP1-206ENST00000519321 S4R3F8 94 aa10.82□□□□□ -0.68
SKP1-206ENST00000519321 KRTAP10-10P60014 251 aa10.76□□□□□ -0.69
SKP1-206ENST00000519321 MT1FP04733 61 aa10.75□□□□□ -0.69
SKP1-206ENST00000519321 KLKP1Q107X0 134 aa10.75□□□□□ -0.69
SKP1-206ENST00000519321 TRAV7A0A075B6U4 112 aa10.74□□□□□ -0.69
SKP1-206ENST00000519321 A8MUN3 132 aa10.73□□□□□ -0.69
SKP1-206ENST00000519321 CSAG1Q6PB30 78 aa10.72□□□□□ -0.69
SKP1-206ENST00000519321 LCA10Q71F78 164 aa10.72□□□□□ -0.69
SKP1-206ENST00000519321 KRTAP9-3Q9BYQ3 159 aa10.6□□□□□ -0.71
SKP1-206ENST00000519321 KRTAP3-3Q9BYR6 98 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms