RNA–Protein interactions for RNA: ENST00000518678.1

TRAM1-202, Transcript of translocation associated membrane protein 1, humanhuman

TSL 4

Gene TRAM1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-202ENST00000518678 XP32Q5T750 250 aa9.69□□□□□ -0.86
TRAM1-202ENST00000518678 Q6ZVQ6 151 aa9.68□□□□□ -0.86
TRAM1-202ENST00000518678 LINC00846Q9NV44 126 aa9.68□□□□□ -0.86
TRAM1-202ENST00000518678 UBL5Q9BZL1 73 aa9.65□□□□□ -0.86
TRAM1-202ENST00000518678 A0A1B0GVX0 72 aa9.64□□□□□ -0.87
TRAM1-202ENST00000518678 IGHV6-1A0A0B4J1U7 121 aa9.62□□□□□ -0.87
TRAM1-202ENST00000518678 A8MWP4 228 aa9.62□□□□□ -0.87
TRAM1-202ENST00000518678 NDUFB1O75438 58 aa9.62□□□□□ -0.87
TRAM1-202ENST00000518678 DSCR10P59022 87 aa9.62□□□□□ -0.87
TRAM1-202ENST00000518678 BPY2O14599 106 aa9.61□□□□□ -0.87
TRAM1-202ENST00000518678 ACYP1P07311 99 aa9.61□□□□□ -0.87
TRAM1-202ENST00000518678 LINC00313P59037 77 aa9.61□□□□□ -0.87
TRAM1-202ENST00000518678 FAM240AA0A1B0GVK7 77 aa9.6□□□□□ -0.87
TRAM1-202ENST00000518678 C8orf87E5RJ46 101 aa9.6□□□□□ -0.87
TRAM1-202ENST00000518678 IGKV3D-7A0A0C4DH55 119 aa9.59□□□□□ -0.87
TRAM1-202ENST00000518678 NOTCH2NLQ7Z3S9 236 aa9.59□□□□□ -0.87
TRAM1-202ENST00000518678 FAT4Q6V0I7 4981 aa9.59□□□□□ -0.87
TRAM1-202ENST00000518678 PRR15Q8IV56 129 aa9.57□□□□□ -0.88
TRAM1-202ENST00000518678 KRTAP16-1A8MUX0 517 aa9.55□□□□□ -0.88
TRAM1-202ENST00000518678 SEC61BP60468 96 aaKnown RBP9.55□□□□□ -0.88
TRAM1-202ENST00000518678 RPL37P61927 97 aaKnown RBP9.55□□□□□ -0.88
TRAM1-202ENST00000518678 K7EQZ3 153 aa9.54□□□□□ -0.88
TRAM1-202ENST00000518678 Q75L30 129 aa9.53□□□□□ -0.88
TRAM1-202ENST00000518678 C20orf166-AS1Q96NR2 134 aa9.53□□□□□ -0.88
TRAM1-202ENST00000518678 C8orf17Q9NRJ1 99 aa9.53□□□□□ -0.88
TRAM1-202ENST00000518678 A8MUU9 505 aa9.51□□□□□ -0.89
TRAM1-202ENST00000518678 J3QR89 54 aa9.5□□□□□ -0.89
TRAM1-202ENST00000518678 CXCL6P80162 114 aa9.48□□□□□ -0.89
TRAM1-202ENST00000518678 Q8N9L7 120 aa9.48□□□□□ -0.89
TRAM1-202ENST00000518678 MMP24-AS1A0A0U1RRL7 71 aa9.47□□□□□ -0.89
TRAM1-202ENST00000518678 PCOTHQ58A44 107 aa9.47□□□□□ -0.89
TRAM1-202ENST00000518678 ATP11AUNQ6ZP68 121 aa9.43□□□□□ -0.9
TRAM1-202ENST00000518678 ATP5EP2Q5VTU8 51 aa9.42□□□□□ -0.9
TRAM1-202ENST00000518678 TMEM254Q8TBM7 123 aa9.42□□□□□ -0.9
TRAM1-202ENST00000518678 hDV103S1A0JD37 113 aa9.41□□□□□ -0.9
TRAM1-202ENST00000518678 Q8N9P0 234 aaPredicted RBP9.41□□□□□ -0.9
TRAM1-202ENST00000518678 LINC00643Q86TS7 51 aa9.4□□□□□ -0.9
TRAM1-202ENST00000518678 MRPL34Q9BQ48 92 aaKnown RBP9.4□□□□□ -0.9
TRAM1-202ENST00000518678 LCE2AQ5TA79 106 aaPredicted RBP9.39□□□□□ -0.91
TRAM1-202ENST00000518678 KRTAP4-1Q9BYQ7 146 aa9.38□□□□□ -0.91
TRAM1-202ENST00000518678 CASC2Q6XLA1 102 aa9.37□□□□□ -0.91
TRAM1-202ENST00000518678 K7ERU9 68 aa9.36□□□□□ -0.91
TRAM1-202ENST00000518678 WFDC13Q8IUB5 93 aa9.36□□□□□ -0.91
TRAM1-202ENST00000518678 HCG22E2RYF7 251 aa9.35□□□□□ -0.91
TRAM1-202ENST00000518678 A0A0U1RQV1 116 aa9.31□□□□□ -0.92
TRAM1-202ENST00000518678 ZCCHC13Q8WW36 166 aaKnown RBP9.3□□□□□ -0.92
TRAM1-202ENST00000518678 NDUFS5O43920 106 aa9.29□□□□□ -0.92
TRAM1-202ENST00000518678 HIST1H4AP62805 103 aaKnown RBP9.28□□□□□ -0.92
TRAM1-202ENST00000518678 KRTAP9-2Q9BYQ4 174 aa9.26□□□□□ -0.93
TRAM1-202ENST00000518678 A0A087WVE0 104 aa9.21□□□□□ -0.94
TRAM1-202ENST00000518678 Q5W150 140 aa9.16□□□□□ -0.94
TRAM1-202ENST00000518678 TP53AIP1Q9HCN2 124 aa9.16□□□□□ -0.94
TRAM1-202ENST00000518678 MT-ATP8P03928 68 aa9.13□□□□□ -0.95
TRAM1-202ENST00000518678 SPINK7P58062 85 aa9.12□□□□□ -0.95
TRAM1-202ENST00000518678 IMUPQ9GZP8 106 aa9.12□□□□□ -0.95
TRAM1-202ENST00000518678 KRTAP19-2Q3LHN2 52 aa9.1□□□□□ -0.95
TRAM1-202ENST00000518678 HRES1P13985 223 aa9.07□□□□□ -0.96
TRAM1-202ENST00000518678 LCE2CQ5TA81 110 aa9.07□□□□□ -0.96
TRAM1-202ENST00000518678 IGKV2D-30A0A075B6S6 120 aa9.03□□□□□ -0.96
TRAM1-202ENST00000518678 UQCRQO14949 82 aa9.03□□□□□ -0.96
TRAM1-202ENST00000518678 IGKV2-30P06310 120 aa9.03□□□□□ -0.96
TRAM1-202ENST00000518678 MPLKIPQ8TAP9 179 aa9.03□□□□□ -0.96
TRAM1-202ENST00000518678 C7orf65Q6ZTY9 151 aa9.02□□□□□ -0.97
TRAM1-202ENST00000518678 TRAV22A0A0B4J277 110 aa9.01□□□□□ -0.97
TRAM1-202ENST00000518678 COX6B2Q6YFQ2 88 aa9□□□□□ -0.97
TRAM1-202ENST00000518678 OCR1Q9BZK8 76 aa8.99□□□□□ -0.97
TRAM1-202ENST00000518678 RBM12B-AS1Q9P1G2 102 aa8.98□□□□□ -0.97
TRAM1-202ENST00000518678 SCGB1A1P11684 91 aa8.97□□□□□ -0.97
TRAM1-202ENST00000518678 KRTAP9-6A0A140TA67 174 aa8.96□□□□□ -0.98
TRAM1-202ENST00000518678 FAM236AA0A1B0GUQ0 79 aa8.94□□□□□ -0.98
TRAM1-202ENST00000518678 FAM236BA0A1B0GV22 79 aa8.94□□□□□ -0.98
TRAM1-202ENST00000518678 H0Y9P7 68 aa8.94□□□□□ -0.98
TRAM1-202ENST00000518678 MT1HP80294 61 aa8.93□□□□□ -0.98
TRAM1-202ENST00000518678 FAM236DA0A1B0GTK5 79 aa8.92□□□□□ -0.98
TRAM1-202ENST00000518678 ATOX1O00244 68 aa8.92□□□□□ -0.98
TRAM1-202ENST00000518678 FAM236CP0DP71 79 aa8.92□□□□□ -0.98
TRAM1-202ENST00000518678 LOC101927531A0A1B0GV80 90 aa8.9□□□□□ -0.98
TRAM1-202ENST00000518678 FLGP20930 4061 aaPredicted RBP8.89□□□□□ -0.99
TRAM1-202ENST00000518678 CYP4F30PQ9H0H9 118 aa8.89□□□□□ -0.99
TRAM1-202ENST00000518678 C5orf47Q569G3 176 aa8.88□□□□□ -0.99
TRAM1-202ENST00000518678 MP68P56378 58 aa8.86□□□□□ -0.99
TRAM1-202ENST00000518678 SMIM20Q8N5G0 67 aa8.86□□□□□ -0.99
TRAM1-202ENST00000518678 C1orf64Q8NEQ6 169 aa8.85□□□□□ -0.99
TRAM1-202ENST00000518678 LINC00208Q96KT6 92 aa8.84□□□□□ -0.99
TRAM1-202ENST00000518678 FSIP2Q5CZC0 6907 aa8.83□□□□□ -1
TRAM1-202ENST00000518678 TRAV7A0A075B6U4 112 aa8.82□□□□□ -1
TRAM1-202ENST00000518678 C4orf26Q17RF5 130 aa8.82□□□□□ -1
TRAM1-202ENST00000518678 H3BPC8 53 aa8.81□□□□□ -1
TRAM1-202ENST00000518678 LORP23490 312 aaPredicted RBP8.76□□□□□ -1.01
TRAM1-202ENST00000518678 M0R2T5 61 aa8.75□□□□□ -1.01
TRAM1-202ENST00000518678 KRTAP10-6P60371 365 aaPredicted RBP8.75□□□□□ -1.01
TRAM1-202ENST00000518678 H1FX-AS1Q4G0G2 97 aa8.75□□□□□ -1.01
TRAM1-202ENST00000518678 KLKP1Q107X0 134 aa8.72□□□□□ -1.01
TRAM1-202ENST00000518678 KRTAP3-1Q9BYR8 98 aa8.72□□□□□ -1.01
TRAM1-202ENST00000518678 SERP2Q8N6R1 65 aa8.7□□□□□ -1.02
TRAM1-202ENST00000518678 CRCT1Q9UGL9 99 aa8.7□□□□□ -1.02
TRAM1-202ENST00000518678 SNURFQ9Y675 71 aa8.59□□□□□ -1.03
TRAM1-202ENST00000518678 C20orf197Q8N268 126 aa8.58□□□□□ -1.04
TRAM1-202ENST00000518678 A8MUN3 132 aa8.57□□□□□ -1.04
TRAM1-202ENST00000518678 COX7CP15954 63 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms