RNA–Protein interactions for RNA: ENST00000518290.1

ARFGEF1-204, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 3,179 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-204ENST00000518290 RBM12B-AS1Q9P1G2 102 aa4.75□□□□□ -1.65
ARFGEF1-204ENST00000518290 A8MWP4 228 aa4.75□□□□□ -1.65
ARFGEF1-204ENST00000518290 SSBP3-AS1Q7Z2R9 100 aa4.75□□□□□ -1.65
ARFGEF1-204ENST00000518290 A0A087WSZ3 146 aa4.75□□□□□ -1.65
ARFGEF1-204ENST00000518290 K7EQZ3 153 aa4.74□□□□□ -1.65
ARFGEF1-204ENST00000518290 KRTAP1-4P0C5Y4 121 aa4.74□□□□□ -1.65
ARFGEF1-204ENST00000518290 TGP01266 2768 aa4.73□□□□□ -1.65
ARFGEF1-204ENST00000518290 PRR4Q16378 134 aa4.73□□□□□ -1.65
ARFGEF1-204ENST00000518290 ZCCHC13Q8WW36 166 aaKnown RBP4.73□□□□□ -1.65
ARFGEF1-204ENST00000518290 HCG22E2RYF7 251 aa4.73□□□□□ -1.65
ARFGEF1-204ENST00000518290 KRTAP10-4P60372 401 aaPredicted RBP4.73□□□□□ -1.65
ARFGEF1-204ENST00000518290 Q5VV11 94 aa4.73□□□□□ -1.65
ARFGEF1-204ENST00000518290 MOBPQ13875 183 aa4.72□□□□□ -1.65
ARFGEF1-204ENST00000518290 A0A0G2JQZ4 141 aa4.72□□□□□ -1.65
ARFGEF1-204ENST00000518290 KTN1-AS1Q86SY8 53 aa4.72□□□□□ -1.65
ARFGEF1-204ENST00000518290 RPS29P62273 56 aaKnown RBP4.71□□□□□ -1.66
ARFGEF1-204ENST00000518290 SRRM2Q9UQ35 2752 aaKnown RBP4.7□□□□□ -1.66
ARFGEF1-204ENST00000518290 MMP24-AS1A0A0U1RRL7 71 aa4.7□□□□□ -1.66
ARFGEF1-204ENST00000518290 KRTAP13-2Q52LG2 175 aa4.69□□□□□ -1.66
ARFGEF1-204ENST00000518290 CYP4F30PQ9H0H9 118 aa4.69□□□□□ -1.66
ARFGEF1-204ENST00000518290 SPINK6Q6UWN8 80 aa4.69□□□□□ -1.66
ARFGEF1-204ENST00000518290 H3BPC8 53 aa4.68□□□□□ -1.66
ARFGEF1-204ENST00000518290 IGLV9-49A0A0B4J1Y8 123 aa4.67□□□□□ -1.66
ARFGEF1-204ENST00000518290 CHKB-CPT1BH3BT56 60 aa4.67□□□□□ -1.66
ARFGEF1-204ENST00000518290 LCA10Q71F78 164 aa4.67□□□□□ -1.66
ARFGEF1-204ENST00000518290 SPTSSBQ8NFR3 76 aa4.67□□□□□ -1.66
ARFGEF1-204ENST00000518290 A0A1B0GVX0 72 aa4.66□□□□□ -1.66
ARFGEF1-204ENST00000518290 A0A087X002 238 aa4.65□□□□□ -1.66
ARFGEF1-204ENST00000518290 A6NN06 94 aa4.65□□□□□ -1.66
ARFGEF1-204ENST00000518290 Q8N9P0 234 aaPredicted RBP4.65□□□□□ -1.66
ARFGEF1-204ENST00000518290 C8orf17Q9NRJ1 99 aa4.63□□□□□ -1.67
ARFGEF1-204ENST00000518290 KMT2CQ8NEZ4 4911 aaKnown RBP4.63□□□□□ -1.67
ARFGEF1-204ENST00000518290 C8orf87E5RJ46 101 aa4.63□□□□□ -1.67
ARFGEF1-204ENST00000518290 CASC2Q6XLA1 102 aa4.63□□□□□ -1.67
ARFGEF1-204ENST00000518290 ATP11AUNQ6ZP68 121 aa4.63□□□□□ -1.67
ARFGEF1-204ENST00000518290 TP53AIP1Q9HCN2 124 aa4.63□□□□□ -1.67
ARFGEF1-204ENST00000518290 ANAPC11Q9NYG5 84 aa4.63□□□□□ -1.67
ARFGEF1-204ENST00000518290 PRR15LQ9BU68 103 aa4.63□□□□□ -1.67
ARFGEF1-204ENST00000518290 NDUFB1O75438 58 aa4.62□□□□□ -1.67
ARFGEF1-204ENST00000518290 KRTAP13-3Q3SY46 172 aa4.62□□□□□ -1.67
ARFGEF1-204ENST00000518290 NDUFS5O43920 106 aa4.61□□□□□ -1.67
ARFGEF1-204ENST00000518290 LIMD2Q9BT23 127 aa4.61□□□□□ -1.67
ARFGEF1-204ENST00000518290 DEFB116Q30KQ4 102 aa4.6□□□□□ -1.67
ARFGEF1-204ENST00000518290 TNXBP22105 4242 aa4.6□□□□□ -1.67
ARFGEF1-204ENST00000518290 SPINK1P00995 79 aa4.59□□□□□ -1.67
ARFGEF1-204ENST00000518290 A6NED7 52 aa4.59□□□□□ -1.67
ARFGEF1-204ENST00000518290 Q75L30 129 aa4.59□□□□□ -1.67
ARFGEF1-204ENST00000518290 KRTAP16-1A8MUX0 517 aa4.59□□□□□ -1.68
ARFGEF1-204ENST00000518290 SPAG11AQ6PDA7 123 aa4.59□□□□□ -1.68
ARFGEF1-204ENST00000518290 LINC00208Q96KT6 92 aa4.59□□□□□ -1.68
ARFGEF1-204ENST00000518290 CDK2AP2O75956 126 aa4.58□□□□□ -1.68
ARFGEF1-204ENST00000518290 SPANXA2-OT1Q8N9U9 137 aa4.58□□□□□ -1.68
ARFGEF1-204ENST00000518290 HSPG2P98160 4391 aa4.58□□□□□ -1.68
ARFGEF1-204ENST00000518290 C7orf65Q6ZTY9 151 aa4.58□□□□□ -1.68
ARFGEF1-204ENST00000518290 MRPL34Q9BQ48 92 aaKnown RBP4.58□□□□□ -1.68
ARFGEF1-204ENST00000518290 LOC101927531A0A1B0GV80 90 aa4.57□□□□□ -1.68
ARFGEF1-204ENST00000518290 LOC100996750A0A140TA64 210 aa4.56□□□□□ -1.68
ARFGEF1-204ENST00000518290 KRTAP4-6Q9BYQ5 205 aa4.56□□□□□ -1.68
ARFGEF1-204ENST00000518290 CDC42SE1Q9NRR8 79 aa4.56□□□□□ -1.68
ARFGEF1-204ENST00000518290 WFDC13Q8IUB5 93 aa4.56□□□□□ -1.68
ARFGEF1-204ENST00000518290 RYR3Q15413 4870 aa4.56□□□□□ -1.68
ARFGEF1-204ENST00000518290 FAT3Q8TDW7 4589 aa4.55□□□□□ -1.68
ARFGEF1-204ENST00000518290 PLA2G1BP04054 148 aaKnown RBP4.55□□□□□ -1.68
ARFGEF1-204ENST00000518290 MP68P56378 58 aa4.54□□□□□ -1.68
ARFGEF1-204ENST00000518290 NOTCH2NLQ7Z3S9 236 aa4.54□□□□□ -1.68
ARFGEF1-204ENST00000518290 H0Y9P7 68 aa4.53□□□□□ -1.68
ARFGEF1-204ENST00000518290 TYMSOSQ8TAI1 123 aa4.53□□□□□ -1.68
ARFGEF1-204ENST00000518290 FAT1Q14517 4588 aa4.53□□□□□ -1.68
ARFGEF1-204ENST00000518290 H3BS24 57 aa4.53□□□□□ -1.68
ARFGEF1-204ENST00000518290 IGHV6-1A0A0B4J1U7 121 aa4.52□□□□□ -1.69
ARFGEF1-204ENST00000518290 RYR1P21817 5038 aa4.52□□□□□ -1.69
ARFGEF1-204ENST00000518290 COA5Q86WW8 74 aa4.52□□□□□ -1.69
ARFGEF1-204ENST00000518290 SPINK7P58062 85 aa4.51□□□□□ -1.69
ARFGEF1-204ENST00000518290 LINC00304Q8N9R0 145 aa4.51□□□□□ -1.69
ARFGEF1-204ENST00000518290 PRAC1Q96KF2 57 aa4.51□□□□□ -1.69
ARFGEF1-204ENST00000518290 LINC00313P59037 77 aa4.5□□□□□ -1.69
ARFGEF1-204ENST00000518290 IGLV7-46A0A075B6I9 117 aa4.49□□□□□ -1.69
ARFGEF1-204ENST00000518290 KRTAP10-8P60410 259 aa4.49□□□□□ -1.69
ARFGEF1-204ENST00000518290 ADM2Q7Z4H4 148 aa4.48□□□□□ -1.69
ARFGEF1-204ENST00000518290 LINC01558Q9Y6Z2 57 aa4.48□□□□□ -1.69
ARFGEF1-204ENST00000518290 PRR26Q8N8Z3 221 aa4.48□□□□□ -1.69
ARFGEF1-204ENST00000518290 FAM229AH3BQW9 127 aa4.47□□□□□ -1.69
ARFGEF1-204ENST00000518290 Q5W150 140 aa4.46□□□□□ -1.7
ARFGEF1-204ENST00000518290 C20orf166-AS1Q96NR2 134 aa4.45□□□□□ -1.7
ARFGEF1-204ENST00000518290 J3QL48 77 aa4.44□□□□□ -1.7
ARFGEF1-204ENST00000518290 A8MUU9 505 aa4.44□□□□□ -1.7
ARFGEF1-204ENST00000518290 SMR3BP02814 79 aaPredicted RBP4.44□□□□□ -1.7
ARFGEF1-204ENST00000518290 LINC01554Q52M75 96 aa4.44□□□□□ -1.7
ARFGEF1-204ENST00000518290 LCE2BO14633 110 aa4.43□□□□□ -1.7
ARFGEF1-204ENST00000518290 IGKV2-30P06310 120 aa4.43□□□□□ -1.7
ARFGEF1-204ENST00000518290 KRTAP17-1Q9BYP8 105 aa4.43□□□□□ -1.7
ARFGEF1-204ENST00000518290 PCOTHQ58A44 107 aa4.43□□□□□ -1.7
ARFGEF1-204ENST00000518290 Q5VSD8 79 aa4.42□□□□□ -1.7
ARFGEF1-204ENST00000518290 HRES1P13985 223 aa4.4□□□□□ -1.71
ARFGEF1-204ENST00000518290 Q8N1X5 172 aa4.4□□□□□ -1.71
ARFGEF1-204ENST00000518290 MT1HL1P0DM35 61 aa4.38□□□□□ -1.71
ARFGEF1-204ENST00000518290 DMAC1Q96GE9 116 aa4.38□□□□□ -1.71
ARFGEF1-204ENST00000518290 LRP1Q07954 4544 aaKnown RBP4.34□□□□□ -1.71
ARFGEF1-204ENST00000518290 EPPK1P58107 5090 aaKnown RBP4.34□□□□□ -1.72
ARFGEF1-204ENST00000518290 FLG2Q5D862 2391 aaPredicted RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms