RNA–Protein interactions for RNA: ENST00000517924.5

LAPTM4B-202, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 5

Gene LAPTM4B, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-202ENST00000517924 Q6ZQT0 140 aa12.47□□□□□ -0.41
LAPTM4B-202ENST00000517924 C8orf87E5RJ46 101 aa12.44□□□□□ -0.42
LAPTM4B-202ENST00000517924 HRES1P13985 223 aa12.42□□□□□ -0.42
LAPTM4B-202ENST00000517924 LOC110117498A0A087WWA1 95 aa12.4□□□□□ -0.42
LAPTM4B-202ENST00000517924 JMJD7-PLA2G4BH0Y9G9 81 aa12.4□□□□□ -0.42
LAPTM4B-202ENST00000517924 J3KT08 172 aa12.4□□□□□ -0.42
LAPTM4B-202ENST00000517924 BATFQ16520 125 aa12.39□□□□□ -0.43
LAPTM4B-202ENST00000517924 C14orf132Q9NPU4 83 aa12.39□□□□□ -0.43
LAPTM4B-202ENST00000517924 MPLKIPQ8TAP9 179 aa12.38□□□□□ -0.43
LAPTM4B-202ENST00000517924 C21orf62-AS1Q17RA5 79 aa12.37□□□□□ -0.43
LAPTM4B-202ENST00000517924 KRTAP9-8Q9BYQ0 159 aa12.37□□□□□ -0.43
LAPTM4B-202ENST00000517924 FAM236DA0A1B0GTK5 79 aa12.35□□□□□ -0.43
LAPTM4B-202ENST00000517924 FAM236CP0DP71 79 aa12.35□□□□□ -0.43
LAPTM4B-202ENST00000517924 TSTD3H0UI37 97 aa12.33□□□□□ -0.44
LAPTM4B-202ENST00000517924 ZCCHC13Q8WW36 166 aaKnown RBP12.32□□□□□ -0.44
LAPTM4B-202ENST00000517924 LYRM7Q5U5X0 104 aa12.3□□□□□ -0.44
LAPTM4B-202ENST00000517924 RBM12B-AS1Q9P1G2 102 aa12.3□□□□□ -0.44
LAPTM4B-202ENST00000517924 IGKV3D-7A0A0C4DH55 119 aa12.29□□□□□ -0.44
LAPTM4B-202ENST00000517924 A8MWP4 228 aa12.29□□□□□ -0.44
LAPTM4B-202ENST00000517924 NDUFB1O75438 58 aa12.29□□□□□ -0.44
LAPTM4B-202ENST00000517924 LOC105371267A0A1B0GV96 52 aa12.28□□□□□ -0.44
LAPTM4B-202ENST00000517924 PDE6GP18545 87 aa12.28□□□□□ -0.44
LAPTM4B-202ENST00000517924 C8orf17Q9NRJ1 99 aa12.28□□□□□ -0.44
LAPTM4B-202ENST00000517924 A0A1B0GW54 56 aa12.27□□□□□ -0.45
LAPTM4B-202ENST00000517924 Q8N9P0 234 aaPredicted RBP12.27□□□□□ -0.45
LAPTM4B-202ENST00000517924 MTURNQ8N3F0 131 aa12.24□□□□□ -0.45
LAPTM4B-202ENST00000517924 C9orf118A6NHY6 69 aa12.22□□□□□ -0.45
LAPTM4B-202ENST00000517924 TAX1BP3O14907 124 aa12.22□□□□□ -0.45
LAPTM4B-202ENST00000517924 SPINK7P58062 85 aa12.22□□□□□ -0.45
LAPTM4B-202ENST00000517924 MT2AP02795 61 aa12.19□□□□□ -0.46
LAPTM4B-202ENST00000517924 NREPQ16612 68 aa12.19□□□□□ -0.46
LAPTM4B-202ENST00000517924 A0A1W2PPM0 123 aa12.17□□□□□ -0.46
LAPTM4B-202ENST00000517924 Q6ZVQ6 151 aa12.17□□□□□ -0.46
LAPTM4B-202ENST00000517924 PRR15Q8IV56 129 aa12.17□□□□□ -0.46
LAPTM4B-202ENST00000517924 H3BT86 120 aa12.15□□□□□ -0.46
LAPTM4B-202ENST00000517924 MMP24-AS1A0A0U1RRL7 71 aa12.13□□□□□ -0.47
LAPTM4B-202ENST00000517924 MT1FP04733 61 aa12.11□□□□□ -0.47
LAPTM4B-202ENST00000517924 K7EQZ3 153 aa12.08□□□□□ -0.48
LAPTM4B-202ENST00000517924 WFDC13Q8IUB5 93 aa12.06□□□□□ -0.48
LAPTM4B-202ENST00000517924 TMEM254Q8TBM7 123 aa12.05□□□□□ -0.48
LAPTM4B-202ENST00000517924 MRPL34Q9BQ48 92 aaKnown RBP12.05□□□□□ -0.48
LAPTM4B-202ENST00000517924 USH2AO75445 5202 aa12.01□□□□□ -0.49
LAPTM4B-202ENST00000517924 hDV103S1A0JD37 113 aa12.01□□□□□ -0.49
LAPTM4B-202ENST00000517924 KRTAP10-10P60014 251 aa12□□□□□ -0.49
LAPTM4B-202ENST00000517924 SPCS1Q9Y6A9 102 aa12□□□□□ -0.49
LAPTM4B-202ENST00000517924 SMCPP49901 116 aaPredicted RBP11.98□□□□□ -0.49
LAPTM4B-202ENST00000517924 BPY2O14599 106 aa11.97□□□□□ -0.49
LAPTM4B-202ENST00000517924 KRTAP9-3Q9BYQ3 159 aa11.97□□□□□ -0.49
LAPTM4B-202ENST00000517924 NDUFS5O43920 106 aa11.96□□□□□ -0.49
LAPTM4B-202ENST00000517924 LCE2BO14633 110 aa11.95□□□□□ -0.5
LAPTM4B-202ENST00000517924 Q8N9L7 120 aa11.94□□□□□ -0.5
LAPTM4B-202ENST00000517924 SSPOA2VEC9 5147 aa11.9□□□□□ -0.5
LAPTM4B-202ENST00000517924 Q5W150 140 aa11.89□□□□□ -0.51
LAPTM4B-202ENST00000517924 PRO0461Q9UI25 63 aa11.87□□□□□ -0.51
LAPTM4B-202ENST00000517924 COL5A1-AS1Q5SY13 56 aa11.84□□□□□ -0.51
LAPTM4B-202ENST00000517924 IGKV2D-30A0A075B6S6 120 aa11.82□□□□□ -0.52
LAPTM4B-202ENST00000517924 IGKV2-30P06310 120 aa11.82□□□□□ -0.52
LAPTM4B-202ENST00000517924 CASC2Q6XLA1 102 aa11.82□□□□□ -0.52
LAPTM4B-202ENST00000517924 LINC00846Q9NV44 126 aa11.8□□□□□ -0.52
LAPTM4B-202ENST00000517924 HCG22E2RYF7 251 aa11.79□□□□□ -0.52
LAPTM4B-202ENST00000517924 K7EP34 96 aa11.79□□□□□ -0.52
LAPTM4B-202ENST00000517924 H1FX-AS1Q4G0G2 97 aa11.77□□□□□ -0.53
LAPTM4B-202ENST00000517924 C7orf65Q6ZTY9 151 aa11.75□□□□□ -0.53
LAPTM4B-202ENST00000517924 KRTAP19-1Q8IUB9 90 aa11.74□□□□□ -0.53
LAPTM4B-202ENST00000517924 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.73□□□□□ -0.53
LAPTM4B-202ENST00000517924 UBL5Q9BZL1 73 aa11.71□□□□□ -0.53
LAPTM4B-202ENST00000517924 FCGBPQ9Y6R7 5405 aaPredicted RBP11.66□□□□□ -0.54
LAPTM4B-202ENST00000517924 C4orf26Q17RF5 130 aa11.65□□□□□ -0.54
LAPTM4B-202ENST00000517924 CXCL6P80162 114 aa11.64□□□□□ -0.55
LAPTM4B-202ENST00000517924 PCP4L1A6NKN8 68 aa11.58□□□□□ -0.56
LAPTM4B-202ENST00000517924 KRTAP9-7A8MTY7 169 aa11.57□□□□□ -0.56
LAPTM4B-202ENST00000517924 GTF2H5Q6ZYL4 71 aa11.57□□□□□ -0.56
LAPTM4B-202ENST00000517924 ETDBQ3ZM63 59 aa11.55□□□□□ -0.56
LAPTM4B-202ENST00000517924 F8W1H4 67 aa11.52□□□□□ -0.57
LAPTM4B-202ENST00000517924 KRTAP3-1Q9BYR8 98 aa11.5□□□□□ -0.57
LAPTM4B-202ENST00000517924 KRTAP19-6Q3LI70 58 aa11.48□□□□□ -0.57
LAPTM4B-202ENST00000517924 C5orf47Q569G3 176 aa11.43□□□□□ -0.58
LAPTM4B-202ENST00000517924 C1orf64Q8NEQ6 169 aa11.39□□□□□ -0.59
LAPTM4B-202ENST00000517924 TP53AIP1Q9HCN2 124 aa11.39□□□□□ -0.59
LAPTM4B-202ENST00000517924 S4R3F8 94 aa11.36□□□□□ -0.59
LAPTM4B-202ENST00000517924 LCA10Q71F78 164 aa11.32□□□□□ -0.6
LAPTM4B-202ENST00000517924 FAM236AA0A1B0GUQ0 79 aa11.25□□□□□ -0.61
LAPTM4B-202ENST00000517924 FAM236BA0A1B0GV22 79 aa11.25□□□□□ -0.61
LAPTM4B-202ENST00000517924 CYP4F30PQ9H0H9 118 aa11.25□□□□□ -0.61
LAPTM4B-202ENST00000517924 CSAG1Q6PB30 78 aa11.23□□□□□ -0.61
LAPTM4B-202ENST00000517924 MACF1Q9UPN3 7388 aaKnown RBP11.23□□□□□ -0.61
LAPTM4B-202ENST00000517924 ACYP1P07311 99 aa11.2□□□□□ -0.62
LAPTM4B-202ENST00000517924 TRAV22A0A0B4J277 110 aa11.19□□□□□ -0.62
LAPTM4B-202ENST00000517924 KRTAP3-3Q9BYR6 98 aa11.18□□□□□ -0.62
LAPTM4B-202ENST00000517924 A0A087WVE0 104 aa11.17□□□□□ -0.62
LAPTM4B-202ENST00000517924 FAM240AA0A1B0GVK7 77 aa11.17□□□□□ -0.62
LAPTM4B-202ENST00000517924 HIST1H4AP62805 103 aaKnown RBP11.14□□□□□ -0.63
LAPTM4B-202ENST00000517924 ATP5EP2Q5VTU8 51 aa11.13□□□□□ -0.63
LAPTM4B-202ENST00000517924 SYNE2Q8WXH0 6885 aaKnown RBP11.13□□□□□ -0.63
LAPTM4B-202ENST00000517924 LOC101927531A0A1B0GV80 90 aa11.11□□□□□ -0.63
LAPTM4B-202ENST00000517924 MT1BP07438 61 aa11.1□□□□□ -0.63
LAPTM4B-202ENST00000517924 SPRR2GQ9BYE4 73 aa11.08□□□□□ -0.64
LAPTM4B-202ENST00000517924 UQCRQO14949 82 aa11.04□□□□□ -0.64
LAPTM4B-202ENST00000517924 H0Y9P7 68 aa11.03□□□□□ -0.64
LAPTM4B-202ENST00000517924 KLKP1Q107X0 134 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms