RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 Q6ZQT0 140 aa12.71□□□□□ -0.37
PVT1-204ENST00000517525 PDE6GP18545 87 aa12.7□□□□□ -0.38
PVT1-204ENST00000517525 J3KT08 172 aa12.69□□□□□ -0.38
PVT1-204ENST00000517525 C8orf87E5RJ46 101 aa12.68□□□□□ -0.38
PVT1-204ENST00000517525 LORP23490 312 aaPredicted RBP12.68□□□□□ -0.38
PVT1-204ENST00000517525 IGHV6-1A0A0B4J1U7 121 aa12.67□□□□□ -0.38
PVT1-204ENST00000517525 A0A1B0GVX0 72 aa12.67□□□□□ -0.38
PVT1-204ENST00000517525 KRTAP10-6P60371 365 aaPredicted RBP12.67□□□□□ -0.38
PVT1-204ENST00000517525 CRCT1Q9UGL9 99 aa12.67□□□□□ -0.38
PVT1-204ENST00000517525 M0R2T5 61 aa12.61□□□□□ -0.39
PVT1-204ENST00000517525 BATFQ16520 125 aa12.61□□□□□ -0.39
PVT1-204ENST00000517525 C9orf118A6NHY6 69 aa12.59□□□□□ -0.39
PVT1-204ENST00000517525 C14orf132Q9NPU4 83 aa12.56□□□□□ -0.4
PVT1-204ENST00000517525 TAX1BP3O14907 124 aa12.55□□□□□ -0.4
PVT1-204ENST00000517525 NDUFB1O75438 58 aa12.54□□□□□ -0.4
PVT1-204ENST00000517525 FSIP2Q5CZC0 6907 aa12.54□□□□□ -0.4
PVT1-204ENST00000517525 A0A1W2PPM0 123 aa12.52□□□□□ -0.41
PVT1-204ENST00000517525 H3BT86 120 aa12.52□□□□□ -0.41
PVT1-204ENST00000517525 A8MWP4 228 aa12.51□□□□□ -0.41
PVT1-204ENST00000517525 Q8N9P0 234 aaPredicted RBP12.48□□□□□ -0.41
PVT1-204ENST00000517525 MPLKIPQ8TAP9 179 aa12.48□□□□□ -0.41
PVT1-204ENST00000517525 HRES1P13985 223 aa12.45□□□□□ -0.42
PVT1-204ENST00000517525 IGKV3D-7A0A0C4DH55 119 aa12.44□□□□□ -0.42
PVT1-204ENST00000517525 ZCCHC13Q8WW36 166 aaKnown RBP12.44□□□□□ -0.42
PVT1-204ENST00000517525 C8orf17Q9NRJ1 99 aa12.44□□□□□ -0.42
PVT1-204ENST00000517525 NREPQ16612 68 aa12.43□□□□□ -0.42
PVT1-204ENST00000517525 PRR15Q8IV56 129 aa12.4□□□□□ -0.42
PVT1-204ENST00000517525 RBM12B-AS1Q9P1G2 102 aa12.38□□□□□ -0.43
PVT1-204ENST00000517525 Q6ZVQ6 151 aa12.34□□□□□ -0.43
PVT1-204ENST00000517525 MTURNQ8N3F0 131 aa12.34□□□□□ -0.43
PVT1-204ENST00000517525 SPCS1Q9Y6A9 102 aa12.33□□□□□ -0.44
PVT1-204ENST00000517525 FAM236DA0A1B0GTK5 79 aa12.31□□□□□ -0.44
PVT1-204ENST00000517525 FAM236CP0DP71 79 aa12.31□□□□□ -0.44
PVT1-204ENST00000517525 SPINK7P58062 85 aa12.3□□□□□ -0.44
PVT1-204ENST00000517525 COL5A1-AS1Q5SY13 56 aa12.28□□□□□ -0.44
PVT1-204ENST00000517525 TMEM254Q8TBM7 123 aa12.28□□□□□ -0.44
PVT1-204ENST00000517525 MMP24-AS1A0A0U1RRL7 71 aa12.27□□□□□ -0.45
PVT1-204ENST00000517525 KRTAP9-8Q9BYQ0 159 aa12.27□□□□□ -0.45
PVT1-204ENST00000517525 SMCPP49901 116 aaPredicted RBP12.25□□□□□ -0.45
PVT1-204ENST00000517525 MRPL34Q9BQ48 92 aaKnown RBP12.24□□□□□ -0.45
PVT1-204ENST00000517525 K7EQZ3 153 aa12.22□□□□□ -0.45
PVT1-204ENST00000517525 BPY2O14599 106 aa12.21□□□□□ -0.45
PVT1-204ENST00000517525 hDV103S1A0JD37 113 aa12.19□□□□□ -0.46
PVT1-204ENST00000517525 PRO0461Q9UI25 63 aa12.19□□□□□ -0.46
PVT1-204ENST00000517525 K7EP34 96 aa12.15□□□□□ -0.46
PVT1-204ENST00000517525 MT2AP02795 61 aa12.08□□□□□ -0.48
PVT1-204ENST00000517525 WFDC13Q8IUB5 93 aa12.08□□□□□ -0.48
PVT1-204ENST00000517525 NDUFS5O43920 106 aa12.04□□□□□ -0.48
PVT1-204ENST00000517525 LINC00846Q9NV44 126 aa12.04□□□□□ -0.48
PVT1-204ENST00000517525 GTF2H5Q6ZYL4 71 aa12.02□□□□□ -0.49
PVT1-204ENST00000517525 Q8N9L7 120 aa12.02□□□□□ -0.49
PVT1-204ENST00000517525 UBL5Q9BZL1 73 aa12.02□□□□□ -0.49
PVT1-204ENST00000517525 CASC2Q6XLA1 102 aa12.01□□□□□ -0.49
PVT1-204ENST00000517525 Q5W150 140 aa11.98□□□□□ -0.49
PVT1-204ENST00000517525 F8W1H4 67 aa11.97□□□□□ -0.49
PVT1-204ENST00000517525 MT1FP04733 61 aa11.97□□□□□ -0.49
PVT1-204ENST00000517525 HCG22E2RYF7 251 aa11.92□□□□□ -0.5
PVT1-204ENST00000517525 CXCL6P80162 114 aa11.92□□□□□ -0.5
PVT1-204ENST00000517525 C7orf65Q6ZTY9 151 aa11.91□□□□□ -0.5
PVT1-204ENST00000517525 PCP4L1A6NKN8 68 aa11.89□□□□□ -0.51
PVT1-204ENST00000517525 KRTAP10-10P60014 251 aa11.89□□□□□ -0.51
PVT1-204ENST00000517525 KRTAP9-3Q9BYQ3 159 aa11.89□□□□□ -0.51
PVT1-204ENST00000517525 H1FX-AS1Q4G0G2 97 aa11.88□□□□□ -0.51
PVT1-204ENST00000517525 IGKV2D-30A0A075B6S6 120 aa11.87□□□□□ -0.51
PVT1-204ENST00000517525 IGKV2-30P06310 120 aa11.87□□□□□ -0.51
PVT1-204ENST00000517525 USH2AO75445 5202 aa11.86□□□□□ -0.51
PVT1-204ENST00000517525 ETDBQ3ZM63 59 aa11.85□□□□□ -0.51
PVT1-204ENST00000517525 KRTAP9-7A8MTY7 169 aa11.84□□□□□ -0.51
PVT1-204ENST00000517525 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.82□□□□□ -0.52
PVT1-204ENST00000517525 LCE2BO14633 110 aa11.78□□□□□ -0.52
PVT1-204ENST00000517525 TP53AIP1Q9HCN2 124 aa11.73□□□□□ -0.53
PVT1-204ENST00000517525 SSPOA2VEC9 5147 aa11.72□□□□□ -0.53
PVT1-204ENST00000517525 C4orf26Q17RF5 130 aa11.68□□□□□ -0.54
PVT1-204ENST00000517525 ACYP1P07311 99 aa11.67□□□□□ -0.54
PVT1-204ENST00000517525 FAM240AA0A1B0GVK7 77 aa11.62□□□□□ -0.55
PVT1-204ENST00000517525 KRTAP3-1Q9BYR8 98 aa11.58□□□□□ -0.56
PVT1-204ENST00000517525 ATP5EP2Q5VTU8 51 aa11.55□□□□□ -0.56
PVT1-204ENST00000517525 KRTAP19-1Q8IUB9 90 aa11.54□□□□□ -0.56
PVT1-204ENST00000517525 C1orf64Q8NEQ6 169 aa11.5□□□□□ -0.57
PVT1-204ENST00000517525 FCGBPQ9Y6R7 5405 aaPredicted RBP11.49□□□□□ -0.57
PVT1-204ENST00000517525 CYP4F30PQ9H0H9 118 aa11.45□□□□□ -0.58
PVT1-204ENST00000517525 S4R3F8 94 aa11.43□□□□□ -0.58
PVT1-204ENST00000517525 TRAV22A0A0B4J277 110 aa11.42□□□□□ -0.58
PVT1-204ENST00000517525 KRTAP19-6Q3LI70 58 aa11.42□□□□□ -0.58
PVT1-204ENST00000517525 C5orf47Q569G3 176 aa11.4□□□□□ -0.58
PVT1-204ENST00000517525 LOC101927531A0A1B0GV80 90 aa11.39□□□□□ -0.59
PVT1-204ENST00000517525 CSAG1Q6PB30 78 aa11.39□□□□□ -0.59
PVT1-204ENST00000517525 LINC00643Q86TS7 51 aa11.37□□□□□ -0.59
PVT1-204ENST00000517525 UQCRQO14949 82 aa11.36□□□□□ -0.59
PVT1-204ENST00000517525 HIST1H4AP62805 103 aaKnown RBP11.36□□□□□ -0.59
PVT1-204ENST00000517525 LCA10Q71F78 164 aa11.35□□□□□ -0.59
PVT1-204ENST00000517525 A0A1B0GV90 55 aa11.29□□□□□ -0.6
PVT1-204ENST00000517525 ATOX1O00244 68 aa11.29□□□□□ -0.6
PVT1-204ENST00000517525 KRTAP3-3Q9BYR6 98 aa11.26□□□□□ -0.61
PVT1-204ENST00000517525 H0Y9P7 68 aa11.23□□□□□ -0.61
PVT1-204ENST00000517525 A0A087WVE0 104 aa11.22□□□□□ -0.61
PVT1-204ENST00000517525 FAM236AA0A1B0GUQ0 79 aa11.22□□□□□ -0.61
PVT1-204ENST00000517525 FAM236BA0A1B0GV22 79 aa11.22□□□□□ -0.61
PVT1-204ENST00000517525 SPRR2GQ9BYE4 73 aa11.15□□□□□ -0.62
PVT1-204ENST00000517525 OCR1Q9BZK8 76 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms