RNA–Protein interactions for RNA: ENST00000515824.1

LMNA-225, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-225ENST00000515824 J3KT08 172 aa10.16□□□□□ -0.78
LMNA-225ENST00000515824 H3BT86 120 aa10.14□□□□□ -0.79
LMNA-225ENST00000515824 NOTCH2NLQ7Z3S9 236 aa10.13□□□□□ -0.79
LMNA-225ENST00000515824 A0A1B0GVX0 72 aa10.12□□□□□ -0.79
LMNA-225ENST00000515824 KRTAP16-1A8MUX0 517 aa10.12□□□□□ -0.79
LMNA-225ENST00000515824 C8orf87E5RJ46 101 aa10.12□□□□□ -0.79
LMNA-225ENST00000515824 COX6B2Q6YFQ2 88 aa10.1□□□□□ -0.79
LMNA-225ENST00000515824 NDUFB1O75438 58 aa10.09□□□□□ -0.79
LMNA-225ENST00000515824 MTURNQ8N3F0 131 aa10.08□□□□□ -0.8
LMNA-225ENST00000515824 MT1HP80294 61 aa10.07□□□□□ -0.8
LMNA-225ENST00000515824 COL5A1-AS1Q5SY13 56 aa10.07□□□□□ -0.8
LMNA-225ENST00000515824 SPCS1Q9Y6A9 102 aa10.07□□□□□ -0.8
LMNA-225ENST00000515824 NREPQ16612 68 aa10.04□□□□□ -0.8
LMNA-225ENST00000515824 A8MWP4 228 aa10.02□□□□□ -0.81
LMNA-225ENST00000515824 KRTAP9-2Q9BYQ4 174 aa9.98□□□□□ -0.81
LMNA-225ENST00000515824 IGKV3D-7A0A0C4DH55 119 aa9.97□□□□□ -0.81
LMNA-225ENST00000515824 M0R2T5 61 aa9.96□□□□□ -0.82
LMNA-225ENST00000515824 C8orf17Q9NRJ1 99 aa9.96□□□□□ -0.82
LMNA-225ENST00000515824 FLGP20930 4061 aaPredicted RBP9.95□□□□□ -0.82
LMNA-225ENST00000515824 SMCPP49901 116 aaPredicted RBP9.94□□□□□ -0.82
LMNA-225ENST00000515824 PRR15Q8IV56 129 aa9.93□□□□□ -0.82
LMNA-225ENST00000515824 PCP4L1A6NKN8 68 aa9.92□□□□□ -0.82
LMNA-225ENST00000515824 K7EP34 96 aa9.92□□□□□ -0.82
LMNA-225ENST00000515824 Q8N9P0 234 aaPredicted RBP9.91□□□□□ -0.82
LMNA-225ENST00000515824 ZCCHC13Q8WW36 166 aaKnown RBP9.9□□□□□ -0.82
LMNA-225ENST00000515824 Q6ZVQ6 151 aa9.89□□□□□ -0.83
LMNA-225ENST00000515824 PRO0461Q9UI25 63 aa9.88□□□□□ -0.83
LMNA-225ENST00000515824 BPY2O14599 106 aa9.86□□□□□ -0.83
LMNA-225ENST00000515824 GTF2H5Q6ZYL4 71 aa9.86□□□□□ -0.83
LMNA-225ENST00000515824 KRTAP10-6P60371 365 aaPredicted RBP9.85□□□□□ -0.83
LMNA-225ENST00000515824 K7EQZ3 153 aa9.84□□□□□ -0.83
LMNA-225ENST00000515824 LORP23490 312 aaPredicted RBP9.83□□□□□ -0.84
LMNA-225ENST00000515824 RBM12B-AS1Q9P1G2 102 aa9.83□□□□□ -0.84
LMNA-225ENST00000515824 MMP24-AS1A0A0U1RRL7 71 aa9.82□□□□□ -0.84
LMNA-225ENST00000515824 FAM236DA0A1B0GTK5 79 aa9.82□□□□□ -0.84
LMNA-225ENST00000515824 FAM236CP0DP71 79 aa9.82□□□□□ -0.84
LMNA-225ENST00000515824 HRES1P13985 223 aa9.82□□□□□ -0.84
LMNA-225ENST00000515824 TMEM254Q8TBM7 123 aa9.82□□□□□ -0.84
LMNA-225ENST00000515824 MRPL34Q9BQ48 92 aaKnown RBP9.82□□□□□ -0.84
LMNA-225ENST00000515824 LCE2DQ5TA82 110 aaPredicted RBP9.8□□□□□ -0.84
LMNA-225ENST00000515824 hDV103S1A0JD37 113 aa9.79□□□□□ -0.84
LMNA-225ENST00000515824 SPINK7P58062 85 aa9.79□□□□□ -0.84
LMNA-225ENST00000515824 MPLKIPQ8TAP9 179 aa9.78□□□□□ -0.84
LMNA-225ENST00000515824 F8W1H4 67 aa9.77□□□□□ -0.85
LMNA-225ENST00000515824 UBL5Q9BZL1 73 aa9.76□□□□□ -0.85
LMNA-225ENST00000515824 LINC00846Q9NV44 126 aa9.75□□□□□ -0.85
LMNA-225ENST00000515824 NDUFS5O43920 106 aa9.74□□□□□ -0.85
LMNA-225ENST00000515824 Q8N9L7 120 aa9.71□□□□□ -0.86
LMNA-225ENST00000515824 ETDBQ3ZM63 59 aa9.69□□□□□ -0.86
LMNA-225ENST00000515824 WFDC13Q8IUB5 93 aa9.69□□□□□ -0.86
LMNA-225ENST00000515824 CASC2Q6XLA1 102 aa9.68□□□□□ -0.86
LMNA-225ENST00000515824 HCG22E2RYF7 251 aa9.6□□□□□ -0.87
LMNA-225ENST00000515824 KRTAP9-6A0A140TA67 174 aa9.59□□□□□ -0.87
LMNA-225ENST00000515824 Q5W150 140 aa9.57□□□□□ -0.88
LMNA-225ENST00000515824 KRTAP9-8Q9BYQ0 159 aa9.56□□□□□ -0.88
LMNA-225ENST00000515824 CXCL6P80162 114 aa9.55□□□□□ -0.88
LMNA-225ENST00000515824 IGKV2D-30A0A075B6S6 120 aa9.54□□□□□ -0.88
LMNA-225ENST00000515824 IGKV2-30P06310 120 aa9.54□□□□□ -0.88
LMNA-225ENST00000515824 C7orf65Q6ZTY9 151 aa9.52□□□□□ -0.89
LMNA-225ENST00000515824 FSIP2Q5CZC0 6907 aa9.5□□□□□ -0.89
LMNA-225ENST00000515824 ACYP1P07311 99 aa9.5□□□□□ -0.89
LMNA-225ENST00000515824 CRCT1Q9UGL9 99 aa9.47□□□□□ -0.89
LMNA-225ENST00000515824 FAM240AA0A1B0GVK7 77 aa9.43□□□□□ -0.9
LMNA-225ENST00000515824 H1FX-AS1Q4G0G2 97 aa9.43□□□□□ -0.9
LMNA-225ENST00000515824 TP53AIP1Q9HCN2 124 aa9.43□□□□□ -0.9
LMNA-225ENST00000515824 MT2AP02795 61 aa9.42□□□□□ -0.9
LMNA-225ENST00000515824 A0A1B0GV90 55 aa9.36□□□□□ -0.91
LMNA-225ENST00000515824 KRTAP10-10P60014 251 aa9.36□□□□□ -0.91
LMNA-225ENST00000515824 ATP5EP2Q5VTU8 51 aa9.36□□□□□ -0.91
LMNA-225ENST00000515824 MT1FP04733 61 aa9.35□□□□□ -0.91
LMNA-225ENST00000515824 C4orf26Q17RF5 130 aa9.35□□□□□ -0.91
LMNA-225ENST00000515824 HIST1H4AP62805 103 aaKnown RBP9.3□□□□□ -0.92
LMNA-225ENST00000515824 LINC00643Q86TS7 51 aa9.26□□□□□ -0.93
LMNA-225ENST00000515824 KRTAP9-3Q9BYQ3 159 aa9.24□□□□□ -0.93
LMNA-225ENST00000515824 C1orf64Q8NEQ6 169 aa9.22□□□□□ -0.93
LMNA-225ENST00000515824 TRAV22A0A0B4J277 110 aa9.21□□□□□ -0.94
LMNA-225ENST00000515824 KRTAP3-1Q9BYR8 98 aa9.19□□□□□ -0.94
LMNA-225ENST00000515824 CYP4F30PQ9H0H9 118 aa9.19□□□□□ -0.94
LMNA-225ENST00000515824 USH2AO75445 5202 aa9.18□□□□□ -0.94
LMNA-225ENST00000515824 LOC101927531A0A1B0GV80 90 aa9.17□□□□□ -0.94
LMNA-225ENST00000515824 J3QR89 54 aa9.17□□□□□ -0.94
LMNA-225ENST00000515824 UQCRQO14949 82 aa9.17□□□□□ -0.94
LMNA-225ENST00000515824 A0A087WVE0 104 aa9.15□□□□□ -0.94
LMNA-225ENST00000515824 LCE2BO14633 110 aa9.15□□□□□ -0.94
LMNA-225ENST00000515824 S4R3F8 94 aa9.13□□□□□ -0.95
LMNA-225ENST00000515824 ATOX1O00244 68 aa9.11□□□□□ -0.95
LMNA-225ENST00000515824 H0Y9P7 68 aa9.1□□□□□ -0.95
LMNA-225ENST00000515824 C5orf47Q569G3 176 aa9.1□□□□□ -0.95
LMNA-225ENST00000515824 SSPOA2VEC9 5147 aa9.07□□□□□ -0.96
LMNA-225ENST00000515824 CSAG1Q6PB30 78 aa9.07□□□□□ -0.96
LMNA-225ENST00000515824 LCA10Q71F78 164 aa9.05□□□□□ -0.96
LMNA-225ENST00000515824 OCR1Q9BZK8 76 aa8.99□□□□□ -0.97
LMNA-225ENST00000515824 MP68P56378 58 aa8.98□□□□□ -0.97
LMNA-225ENST00000515824 LINC00208Q96KT6 92 aa8.97□□□□□ -0.97
LMNA-225ENST00000515824 FAM236AA0A1B0GUQ0 79 aa8.96□□□□□ -0.98
LMNA-225ENST00000515824 FAM236BA0A1B0GV22 79 aa8.96□□□□□ -0.98
LMNA-225ENST00000515824 KRTAP19-1Q8IUB9 90 aa8.95□□□□□ -0.98
LMNA-225ENST00000515824 SCGB1A1P11684 91 aa8.92□□□□□ -0.98
LMNA-225ENST00000515824 KRTAP3-3Q9BYR6 98 aa8.92□□□□□ -0.98
LMNA-225ENST00000515824 A8MUN3 132 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms