RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 MPLKIPQ8TAP9 179 aa6.1□□□□□ -1.43
SNHG4-208ENST00000514110 VAMP8Q9BV40 100 aa6.1□□□□□ -1.43
SNHG4-208ENST00000514110 PRO0628Q9UI54 55 aa6.1□□□□□ -1.43
SNHG4-208ENST00000514110 SSPOA2VEC9 5147 aa6.09□□□□□ -1.43
SNHG4-208ENST00000514110 TRBV7-4A0A0J9YYF1 115 aa6.09□□□□□ -1.43
SNHG4-208ENST00000514110 DEFB116Q30KQ4 102 aa6.09□□□□□ -1.43
SNHG4-208ENST00000514110 MT1FP04733 61 aa6.08□□□□□ -1.44
SNHG4-208ENST00000514110 LINC00472Q9H8W2 130 aa6.08□□□□□ -1.44
SNHG4-208ENST00000514110 ORMDL1Q9P0S3 153 aa6.07□□□□□ -1.44
SNHG4-208ENST00000514110 LCE2BO14633 110 aa6.06□□□□□ -1.44
SNHG4-208ENST00000514110 C4orf26Q17RF5 130 aa6.06□□□□□ -1.44
SNHG4-208ENST00000514110 RBM12B-AS1Q9P1G2 102 aa6.06□□□□□ -1.44
SNHG4-208ENST00000514110 IGHV6-1A0A0B4J1U7 121 aa6.05□□□□□ -1.44
SNHG4-208ENST00000514110 DNAL4O96015 105 aa6.05□□□□□ -1.44
SNHG4-208ENST00000514110 KRTAP9-3Q9BYQ3 159 aa6.05□□□□□ -1.44
SNHG4-208ENST00000514110 CCKP06307 115 aa6.04□□□□□ -1.44
SNHG4-208ENST00000514110 H3BQ85 93 aa6.03□□□□□ -1.44
SNHG4-208ENST00000514110 TMEM256-PLSCR3K7ERE1 68 aa6.03□□□□□ -1.44
SNHG4-208ENST00000514110 K7ERJ3 54 aa6.03□□□□□ -1.44
SNHG4-208ENST00000514110 TRACP01848 142 aa6.03□□□□□ -1.44
SNHG4-208ENST00000514110 PSMB2P49721 201 aa6.02□□□□□ -1.45
SNHG4-208ENST00000514110 KRTAP10-10P60014 251 aa6.02□□□□□ -1.45
SNHG4-208ENST00000514110 KRTAP19-1Q8IUB9 90 aa6.02□□□□□ -1.45
SNHG4-208ENST00000514110 FCGBPQ9Y6R7 5405 aaPredicted RBP6□□□□□ -1.45
SNHG4-208ENST00000514110 K7ERU9 68 aa6□□□□□ -1.45
SNHG4-208ENST00000514110 A0A1B0GVX0 72 aa5.99□□□□□ -1.45
SNHG4-208ENST00000514110 HSD52Q0P140 79 aa5.99□□□□□ -1.45
SNHG4-208ENST00000514110 C8orf87E5RJ46 101 aa5.98□□□□□ -1.45
SNHG4-208ENST00000514110 COX6CP09669 75 aa5.98□□□□□ -1.45
SNHG4-208ENST00000514110 Q6ZVQ6 151 aa5.96□□□□□ -1.46
SNHG4-208ENST00000514110 ZCCHC13Q8WW36 166 aaKnown RBP5.96□□□□□ -1.46
SNHG4-208ENST00000514110 RBM3P98179 157 aaKnown RBP5.95□□□□□ -1.46
SNHG4-208ENST00000514110 FAM240AA0A1B0GVK7 77 aa5.94□□□□□ -1.46
SNHG4-208ENST00000514110 SPINK7P58062 85 aa5.94□□□□□ -1.46
SNHG4-208ENST00000514110 PYY3Q5JQD4 70 aa5.94□□□□□ -1.46
SNHG4-208ENST00000514110 DSCR8Q96T75 97 aa5.93□□□□□ -1.46
SNHG4-208ENST00000514110 SCGB1C2P0DMR2 95 aa5.91□□□□□ -1.46
SNHG4-208ENST00000514110 C9orf118A6NHY6 69 aa5.9□□□□□ -1.46
SNHG4-208ENST00000514110 J3KT08 172 aa5.9□□□□□ -1.46
SNHG4-208ENST00000514110 Q6ZQT0 140 aa5.9□□□□□ -1.46
SNHG4-208ENST00000514110 Q8N9P0 234 aaPredicted RBP5.9□□□□□ -1.46
SNHG4-208ENST00000514110 C9JAW5 83 aa5.89□□□□□ -1.47
SNHG4-208ENST00000514110 BAALC-AS2P0C853 105 aa5.89□□□□□ -1.47
SNHG4-208ENST00000514110 RPS28P62857 69 aaKnown RBP5.88□□□□□ -1.47
SNHG4-208ENST00000514110 UQCR10Q9UDW1 63 aa5.88□□□□□ -1.47
SNHG4-208ENST00000514110 WFDC13Q8IUB5 93 aa5.87□□□□□ -1.47
SNHG4-208ENST00000514110 NDUFB1O75438 58 aa5.86□□□□□ -1.47
SNHG4-208ENST00000514110 KRTAP19-6Q3LI70 58 aa5.86□□□□□ -1.47
SNHG4-208ENST00000514110 C8orf17Q9NRJ1 99 aa5.86□□□□□ -1.47
SNHG4-208ENST00000514110 A8MWP4 228 aa5.85□□□□□ -1.47
SNHG4-208ENST00000514110 M0R143 59 aa5.85□□□□□ -1.47
SNHG4-208ENST00000514110 BATFQ16520 125 aa5.84□□□□□ -1.47
SNHG4-208ENST00000514110 IGKV3D-7A0A0C4DH55 119 aa5.83□□□□□ -1.48
SNHG4-208ENST00000514110 LYRM7Q5U5X0 104 aa5.83□□□□□ -1.48
SNHG4-208ENST00000514110 PMAIP1Q13794 54 aa5.82□□□□□ -1.48
SNHG4-208ENST00000514110 LINC00846Q9NV44 126 aa5.81□□□□□ -1.48
SNHG4-208ENST00000514110 LOC110117498A0A087WWA1 95 aa5.8□□□□□ -1.48
SNHG4-208ENST00000514110 A0A1B0GW54 56 aa5.79□□□□□ -1.48
SNHG4-208ENST00000514110 JMJD7-PLA2G4BH0Y9G9 81 aa5.79□□□□□ -1.48
SNHG4-208ENST00000514110 NAA38Q9BRA0 125 aaKnown RBP5.79□□□□□ -1.48
SNHG4-208ENST00000514110 ATXN8Q156A1 80 aa5.78□□□□□ -1.48
SNHG4-208ENST00000514110 PRR15Q8IV56 129 aa5.78□□□□□ -1.48
SNHG4-208ENST00000514110 C14orf132Q9NPU4 83 aa5.77□□□□□ -1.49
SNHG4-208ENST00000514110 MMP24-AS1A0A0U1RRL7 71 aa5.75□□□□□ -1.49
SNHG4-208ENST00000514110 PDE6GP18545 87 aa5.75□□□□□ -1.49
SNHG4-208ENST00000514110 H1FX-AS1Q4G0G2 97 aa5.75□□□□□ -1.49
SNHG4-208ENST00000514110 TMEM254Q8TBM7 123 aa5.75□□□□□ -1.49
SNHG4-208ENST00000514110 MRPL34Q9BQ48 92 aaKnown RBP5.75□□□□□ -1.49
SNHG4-208ENST00000514110 NREPQ16612 68 aa5.74□□□□□ -1.49
SNHG4-208ENST00000514110 MACF1Q9UPN3 7388 aaKnown RBP5.71□□□□□ -1.5
SNHG4-208ENST00000514110 hDV103S1A0JD37 113 aa5.7□□□□□ -1.5
SNHG4-208ENST00000514110 K7EQZ3 153 aa5.7□□□□□ -1.5
SNHG4-208ENST00000514110 COL5A1-AS1Q5SY13 56 aa5.7□□□□□ -1.5
SNHG4-208ENST00000514110 NDUFS5O43920 106 aa5.69□□□□□ -1.5
SNHG4-208ENST00000514110 IGKV2D-30A0A075B6S6 120 aa5.67□□□□□ -1.5
SNHG4-208ENST00000514110 IGKV2-30P06310 120 aa5.67□□□□□ -1.5
SNHG4-208ENST00000514110 KRTAP6-3Q3LI67 103 aa5.67□□□□□ -1.5
SNHG4-208ENST00000514110 Q5W150 140 aa5.67□□□□□ -1.5
SNHG4-208ENST00000514110 ANAPC13Q9BS18 74 aa5.66□□□□□ -1.5
SNHG4-208ENST00000514110 KRTAP23-1A1A580 65 aa5.65□□□□□ -1.5
SNHG4-208ENST00000514110 J3QR89 54 aa5.65□□□□□ -1.5
SNHG4-208ENST00000514110 C7orf65Q6ZTY9 151 aa5.64□□□□□ -1.51
SNHG4-208ENST00000514110 SYNE2Q8WXH0 6885 aaKnown RBP5.63□□□□□ -1.51
SNHG4-208ENST00000514110 BPY2O14599 106 aa5.61□□□□□ -1.51
SNHG4-208ENST00000514110 GTF2H5Q6ZYL4 71 aa5.61□□□□□ -1.51
SNHG4-208ENST00000514110 Q8N9L7 120 aa5.6□□□□□ -1.51
SNHG4-208ENST00000514110 H3BT86 120 aa5.59□□□□□ -1.51
SNHG4-208ENST00000514110 HCG22E2RYF7 251 aa5.58□□□□□ -1.52
SNHG4-208ENST00000514110 PSPHP1O15172 72 aa5.58□□□□□ -1.52
SNHG4-208ENST00000514110 CASC2Q6XLA1 102 aa5.58□□□□□ -1.52
SNHG4-208ENST00000514110 KRTAP3-1Q9BYR8 98 aa5.54□□□□□ -1.52
SNHG4-208ENST00000514110 FAM236AA0A1B0GUQ0 79 aa5.53□□□□□ -1.52
SNHG4-208ENST00000514110 FAM236BA0A1B0GV22 79 aa5.53□□□□□ -1.52
SNHG4-208ENST00000514110 A0A1W2PPM0 123 aa5.53□□□□□ -1.52
SNHG4-208ENST00000514110 MT1BP07438 61 aa5.53□□□□□ -1.52
SNHG4-208ENST00000514110 CXCL6P80162 114 aa5.53□□□□□ -1.52
SNHG4-208ENST00000514110 IMUPQ9GZP8 106 aa5.53□□□□□ -1.52
SNHG4-208ENST00000514110 TAX1BP3O14907 124 aa5.52□□□□□ -1.53
SNHG4-208ENST00000514110 MP68P56378 58 aa5.52□□□□□ -1.53
SNHG4-208ENST00000514110 A6NN06 94 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms