RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 TRIAP1O43715 76 aa9.29□□□□□ -0.92
SQSTM1-215ENST00000514093 MT1BP07438 61 aa9.28□□□□□ -0.92
SQSTM1-215ENST00000514093 KRTAP5-9P26371 169 aa9.28□□□□□ -0.92
SQSTM1-215ENST00000514093 HIST3H2BBQ8N257 126 aa9.28□□□□□ -0.92
SQSTM1-215ENST00000514093 DNAL4O96015 105 aa9.27□□□□□ -0.93
SQSTM1-215ENST00000514093 PRO1854Q9UHT4 67 aa9.26□□□□□ -0.93
SQSTM1-215ENST00000514093 S100A2P29034 98 aa9.25□□□□□ -0.93
SQSTM1-215ENST00000514093 TMEM256-PLSCR3K7ERE1 68 aa9.24□□□□□ -0.93
SQSTM1-215ENST00000514093 DLEU1O43261 78 aa9.24□□□□□ -0.93
SQSTM1-215ENST00000514093 C14orf144Q96I85 54 aa9.23□□□□□ -0.93
SQSTM1-215ENST00000514093 J3KT08 172 aa9.22□□□□□ -0.93
SQSTM1-215ENST00000514093 IGKV3D-7A0A0C4DH55 119 aa9.21□□□□□ -0.94
SQSTM1-215ENST00000514093 H3BQ85 93 aa9.21□□□□□ -0.94
SQSTM1-215ENST00000514093 C8orf17Q9NRJ1 99 aa9.21□□□□□ -0.94
SQSTM1-215ENST00000514093 NDUFB1O75438 58 aa9.2□□□□□ -0.94
SQSTM1-215ENST00000514093 KRTAP2-3P0C7H8 128 aa9.19□□□□□ -0.94
SQSTM1-215ENST00000514093 Q5VV11 94 aa9.19□□□□□ -0.94
SQSTM1-215ENST00000514093 KRTAP2-4Q9BYR9 128 aa9.19□□□□□ -0.94
SQSTM1-215ENST00000514093 DSCR8Q96T75 97 aa9.18□□□□□ -0.94
SQSTM1-215ENST00000514093 HIGD1BQ9P298 99 aa9.18□□□□□ -0.94
SQSTM1-215ENST00000514093 KRTAP10-5P60370 271 aa9.17□□□□□ -0.94
SQSTM1-215ENST00000514093 CEND1Q8N111 149 aa9.17□□□□□ -0.94
SQSTM1-215ENST00000514093 UBE2V1Q13404 147 aa9.16□□□□□ -0.94
SQSTM1-215ENST00000514093 C2orf91Q6ZV80 131 aa9.16□□□□□ -0.94
SQSTM1-215ENST00000514093 FAM236AA0A1B0GUQ0 79 aa9.14□□□□□ -0.95
SQSTM1-215ENST00000514093 FAM236BA0A1B0GV22 79 aa9.14□□□□□ -0.95
SQSTM1-215ENST00000514093 FXYD2P54710 66 aa9.14□□□□□ -0.95
SQSTM1-215ENST00000514093 Q6ZVQ6 151 aa9.14□□□□□ -0.95
SQSTM1-215ENST00000514093 PSMB2P49721 201 aa9.13□□□□□ -0.95
SQSTM1-215ENST00000514093 RBM3P98179 157 aaKnown RBP9.13□□□□□ -0.95
SQSTM1-215ENST00000514093 KRTAP19-8Q3LI54 63 aa9.12□□□□□ -0.95
SQSTM1-215ENST00000514093 Q6ZQT0 140 aa9.12□□□□□ -0.95
SQSTM1-215ENST00000514093 TMEM238LA0A1B0GVL6 79 aa9.11□□□□□ -0.95
SQSTM1-215ENST00000514093 A6NJY4 79 aa9.11□□□□□ -0.95
SQSTM1-215ENST00000514093 PAM16Q9Y3D7 125 aa9.08□□□□□ -0.96
SQSTM1-215ENST00000514093 SPATA45Q537H7 98 aa9.06□□□□□ -0.96
SQSTM1-215ENST00000514093 C5orf47Q569G3 176 aa9.06□□□□□ -0.96
SQSTM1-215ENST00000514093 IGKV2D-30A0A075B6S6 120 aa9.05□□□□□ -0.96
SQSTM1-215ENST00000514093 K7ERJ3 54 aa9.05□□□□□ -0.96
SQSTM1-215ENST00000514093 IGKV2-30P06310 120 aa9.05□□□□□ -0.96
SQSTM1-215ENST00000514093 SPRR2GQ9BYE4 73 aa9.05□□□□□ -0.96
SQSTM1-215ENST00000514093 C9JAW5 83 aa9.04□□□□□ -0.96
SQSTM1-215ENST00000514093 COX6CP09669 75 aa9.03□□□□□ -0.96
SQSTM1-215ENST00000514093 C21orf62-AS1Q17RA5 79 aa9.03□□□□□ -0.96
SQSTM1-215ENST00000514093 MRPL34Q9BQ48 92 aaKnown RBP9.01□□□□□ -0.97
SQSTM1-215ENST00000514093 S100A6P06703 90 aa9□□□□□ -0.97
SQSTM1-215ENST00000514093 NDUFS5O43920 106 aa8.98□□□□□ -0.97
SQSTM1-215ENST00000514093 PRR15Q8IV56 129 aa8.98□□□□□ -0.97
SQSTM1-215ENST00000514093 TMEM254Q8TBM7 123 aa8.98□□□□□ -0.97
SQSTM1-215ENST00000514093 MMP24-AS1A0A0U1RRL7 71 aa8.97□□□□□ -0.97
SQSTM1-215ENST00000514093 C4orf26Q17RF5 130 aa8.96□□□□□ -0.98
SQSTM1-215ENST00000514093 C7orf65Q6ZTY9 151 aa8.95□□□□□ -0.98
SQSTM1-215ENST00000514093 SPRR2EP22531 72 aa8.94□□□□□ -0.98
SQSTM1-215ENST00000514093 SPRR2BP35325 72 aa8.94□□□□□ -0.98
SQSTM1-215ENST00000514093 SPRR2AP35326 72 aa8.94□□□□□ -0.98
SQSTM1-215ENST00000514093 Q5W150 140 aa8.94□□□□□ -0.98
SQSTM1-215ENST00000514093 BAALC-AS2P0C853 105 aa8.93□□□□□ -0.98
SQSTM1-215ENST00000514093 VAMP8Q9BV40 100 aa8.93□□□□□ -0.98
SQSTM1-215ENST00000514093 IMUPQ9GZP8 106 aa8.93□□□□□ -0.98
SQSTM1-215ENST00000514093 SPRR2FQ96RM1 72 aa8.91□□□□□ -0.98
SQSTM1-215ENST00000514093 hDV103S1A0JD37 113 aa8.89□□□□□ -0.99
SQSTM1-215ENST00000514093 SCGB1C2P0DMR2 95 aa8.89□□□□□ -0.99
SQSTM1-215ENST00000514093 KRTAP2-2Q9BYT5 123 aa8.86□□□□□ -0.99
SQSTM1-215ENST00000514093 KRTAP2-1Q9BYU5 128 aa8.86□□□□□ -0.99
SQSTM1-215ENST00000514093 HSD52Q0P140 79 aa8.85□□□□□ -0.99
SQSTM1-215ENST00000514093 CSAG1Q6PB30 78 aa8.85□□□□□ -0.99
SQSTM1-215ENST00000514093 S4R3F8 94 aa8.84□□□□□ -0.99
SQSTM1-215ENST00000514093 S100A1P23297 94 aa8.83□□□□□ -1
SQSTM1-215ENST00000514093 KLKP1Q107X0 134 aa8.83□□□□□ -1
SQSTM1-215ENST00000514093 A0A1B0GW54 56 aa8.82□□□□□ -1
SQSTM1-215ENST00000514093 K7EQZ3 153 aa8.82□□□□□ -1
SQSTM1-215ENST00000514093 NREPQ16612 68 aa8.82□□□□□ -1
SQSTM1-215ENST00000514093 KRTAP3-1Q9BYR8 98 aa8.82□□□□□ -1
SQSTM1-215ENST00000514093 LOC110117498A0A087WWA1 95 aa8.81□□□□□ -1
SQSTM1-215ENST00000514093 LCA10Q71F78 164 aa8.8□□□□□ -1
SQSTM1-215ENST00000514093 JMJD7-PLA2G4BH0Y9G9 81 aa8.77□□□□□ -1.01
SQSTM1-215ENST00000514093 SMCPP49901 116 aaPredicted RBP8.77□□□□□ -1.01
SQSTM1-215ENST00000514093 C14orf132Q9NPU4 83 aa8.76□□□□□ -1.01
SQSTM1-215ENST00000514093 PDE6GP18545 87 aa8.72□□□□□ -1.01
SQSTM1-215ENST00000514093 LCE1AQ5T7P2 110 aa8.72□□□□□ -1.01
SQSTM1-215ENST00000514093 TMA7Q9Y2S6 64 aaKnown RBP8.71□□□□□ -1.02
SQSTM1-215ENST00000514093 HCG22E2RYF7 251 aa8.7□□□□□ -1.02
SQSTM1-215ENST00000514093 C1orf64Q8NEQ6 169 aa8.69□□□□□ -1.02
SQSTM1-215ENST00000514093 ATXN8Q156A1 80 aa8.66□□□□□ -1.02
SQSTM1-215ENST00000514093 KRTAP8-1Q8IUC2 63 aa8.65□□□□□ -1.02
SQSTM1-215ENST00000514093 SPRR2DP22532 72 aa8.64□□□□□ -1.03
SQSTM1-215ENST00000514093 CASC2Q6XLA1 102 aa8.63□□□□□ -1.03
SQSTM1-215ENST00000514093 Q8N9L7 120 aa8.61□□□□□ -1.03
SQSTM1-215ENST00000514093 KRTAP3-3Q9BYR6 98 aa8.61□□□□□ -1.03
SQSTM1-215ENST00000514093 CRIPTQ9P021 101 aa8.61□□□□□ -1.03
SQSTM1-215ENST00000514093 BPY2O14599 106 aa8.6□□□□□ -1.03
SQSTM1-215ENST00000514093 CXCL6P80162 114 aa8.59□□□□□ -1.03
SQSTM1-215ENST00000514093 NAA38Q9BRA0 125 aaKnown RBP8.59□□□□□ -1.03
SQSTM1-215ENST00000514093 UQCR10Q9UDW1 63 aa8.54□□□□□ -1.04
SQSTM1-215ENST00000514093 MT1XP80297 61 aa8.53□□□□□ -1.04
SQSTM1-215ENST00000514093 PYY3Q5JQD4 70 aa8.52□□□□□ -1.05
SQSTM1-215ENST00000514093 PRO2289Q9P1D8 64 aa8.52□□□□□ -1.05
SQSTM1-215ENST00000514093 A0A087WVE0 104 aa8.47□□□□□ -1.05
SQSTM1-215ENST00000514093 LCE3BQ5TA77 95 aa8.46□□□□□ -1.06
SQSTM1-215ENST00000514093 GPR98Q8WXG9 6306 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms