RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	NREP	Q16612	68 aa		7.87	□□□□□ -1.15
MATR3-238	ENST00000512107	IGKV3D-7	A0A0C4DH55	119 aa		7.85	□□□□□ -1.15
MATR3-238	ENST00000512107	KRTAP16-1	A8MUX0	517 aa		7.85	□□□□□ -1.15
MATR3-238	ENST00000512107	C21orf62-AS1	Q17RA5	79 aa		7.84	□□□□□ -1.15
MATR3-238	ENST00000512107	KRTAP4-1	Q9BYQ7	146 aa		7.84	□□□□□ -1.15
MATR3-238	ENST00000512107	IGHV6-1	A0A0B4J1U7	121 aa		7.83	□□□□□ -1.16
MATR3-238	ENST00000512107		A0A0U1RQV1	116 aa		7.82	□□□□□ -1.16
MATR3-238	ENST00000512107		A0A1B0GVX0	72 aa		7.82	□□□□□ -1.16
MATR3-238	ENST00000512107		A8MWP4	228 aa		7.8	□□□□□ -1.16
MATR3-238	ENST00000512107		J3KT08	172 aa		7.8	□□□□□ -1.16
MATR3-238	ENST00000512107		Q8N9L7	120 aa		7.79	□□□□□ -1.16
MATR3-238	ENST00000512107		K7EQZ3	153 aa		7.78	□□□□□ -1.16
MATR3-238	ENST00000512107	LINC00313	P59037	77 aa		7.78	□□□□□ -1.16
MATR3-238	ENST00000512107	RPL37	P61927	97 aa	Known RBP	7.78	□□□□□ -1.16
MATR3-238	ENST00000512107	BPY2	O14599	106 aa		7.76	□□□□□ -1.17
MATR3-238	ENST00000512107	PCOTH	Q58A44	107 aa		7.76	□□□□□ -1.17
MATR3-238	ENST00000512107	PRR15	Q8IV56	129 aa		7.76	□□□□□ -1.17
MATR3-238	ENST00000512107		A8MUU9	505 aa		7.75	□□□□□ -1.17
MATR3-238	ENST00000512107	C20orf166-AS1	Q96NR2	134 aa		7.75	□□□□□ -1.17
MATR3-238	ENST00000512107	C8orf17	Q9NRJ1	99 aa		7.75	□□□□□ -1.17
MATR3-238	ENST00000512107	MMP24-AS1	A0A0U1RRL7	71 aa		7.74	□□□□□ -1.17
MATR3-238	ENST00000512107	UBL5	Q9BZL1	73 aa		7.74	□□□□□ -1.17
MATR3-238	ENST00000512107		Q75L30	129 aa		7.73	□□□□□ -1.17
MATR3-238	ENST00000512107	FAM240A	A0A1B0GVK7	77 aa		7.72	□□□□□ -1.17
MATR3-238	ENST00000512107	C8orf87	E5RJ46	101 aa		7.72	□□□□□ -1.17
MATR3-238	ENST00000512107	MUC2	Q02817	5179 aa		7.72	□□□□□ -1.17
MATR3-238	ENST00000512107	NDUFB1	O75438	58 aa		7.7	□□□□□ -1.18
MATR3-238	ENST00000512107	FAT4	Q6V0I7	4981 aa		7.69	□□□□□ -1.18
MATR3-238	ENST00000512107	SEC61B	P60468	96 aa	Known RBP	7.69	□□□□□ -1.18
MATR3-238	ENST00000512107	ACYP1	P07311	99 aa		7.68	□□□□□ -1.18
MATR3-238	ENST00000512107		Q8N9P0	234 aa	Predicted RBP	7.65	□□□□□ -1.18
MATR3-238	ENST00000512107	CXCL6	P80162	114 aa		7.64	□□□□□ -1.19
MATR3-238	ENST00000512107	WFDC13	Q8IUB5	93 aa		7.64	□□□□□ -1.19
MATR3-238	ENST00000512107	hDV103S1	A0JD37	113 aa		7.62	□□□□□ -1.19
MATR3-238	ENST00000512107	TMEM254	Q8TBM7	123 aa		7.62	□□□□□ -1.19
MATR3-238	ENST00000512107	MRPL34	Q9BQ48	92 aa	Known RBP	7.61	□□□□□ -1.19
MATR3-238	ENST00000512107	ATP11AUN	Q6ZP68	121 aa		7.59	□□□□□ -1.19
MATR3-238	ENST00000512107	KRTAP19-2	Q3LHN2	52 aa		7.58	□□□□□ -1.2
MATR3-238	ENST00000512107	CASC2	Q6XLA1	102 aa		7.58	□□□□□ -1.2
MATR3-238	ENST00000512107	LINC00643	Q86TS7	51 aa		7.58	□□□□□ -1.2
MATR3-238	ENST00000512107	HCG22	E2RYF7	251 aa		7.57	□□□□□ -1.2
MATR3-238	ENST00000512107	CRCT1	Q9UGL9	99 aa		7.56	□□□□□ -1.2
MATR3-238	ENST00000512107		A0A087WVE0	104 aa		7.55	□□□□□ -1.2
MATR3-238	ENST00000512107		J3QR89	54 aa		7.55	□□□□□ -1.2
MATR3-238	ENST00000512107	LCE2D	Q5TA82	110 aa	Predicted RBP	7.55	□□□□□ -1.2
MATR3-238	ENST00000512107		Q5W150	140 aa		7.55	□□□□□ -1.2
MATR3-238	ENST00000512107	ZCCHC13	Q8WW36	166 aa	Known RBP	7.55	□□□□□ -1.2
MATR3-238	ENST00000512107	ATP5EP2	Q5VTU8	51 aa		7.54	□□□□□ -1.2
MATR3-238	ENST00000512107	LCE2C	Q5TA81	110 aa		7.52	□□□□□ -1.21
MATR3-238	ENST00000512107	NDUFS5	O43920	106 aa		7.5	□□□□□ -1.21
MATR3-238	ENST00000512107	HIST1H4A	P62805	103 aa	Known RBP	7.5	□□□□□ -1.21
MATR3-238	ENST00000512107		K7ERU9	68 aa		7.49	□□□□□ -1.21
MATR3-238	ENST00000512107	MT-ATP8	P03928	68 aa		7.48	□□□□□ -1.21
MATR3-238	ENST00000512107	LCE2A	Q5TA79	106 aa	Predicted RBP	7.48	□□□□□ -1.21
MATR3-238	ENST00000512107	FSIP2	Q5CZC0	6907 aa		7.47	□□□□□ -1.21
MATR3-238	ENST00000512107	HRES1	P13985	223 aa		7.45	□□□□□ -1.22
MATR3-238	ENST00000512107	SPINK7	P58062	85 aa		7.42	□□□□□ -1.22
MATR3-238	ENST00000512107	MPLKIP	Q8TAP9	179 aa		7.4	□□□□□ -1.22
MATR3-238	ENST00000512107	FLG	P20930	4061 aa	Predicted RBP	7.37	□□□□□ -1.23
MATR3-238	ENST00000512107	IGKV2D-30	A0A075B6S6	120 aa		7.34	□□□□□ -1.23
MATR3-238	ENST00000512107	IGKV2-30	P06310	120 aa		7.34	□□□□□ -1.23
MATR3-238	ENST00000512107	MT1H	P80294	61 aa		7.33	□□□□□ -1.24
MATR3-238	ENST00000512107	TP53AIP1	Q9HCN2	124 aa		7.33	□□□□□ -1.24
MATR3-238	ENST00000512107	OCR1	Q9BZK8	76 aa		7.32	□□□□□ -1.24
MATR3-238	ENST00000512107	IMUP	Q9GZP8	106 aa		7.3	□□□□□ -1.24
MATR3-238	ENST00000512107	UQCRQ	O14949	82 aa		7.27	□□□□□ -1.25
MATR3-238	ENST00000512107	C7orf65	Q6ZTY9	151 aa		7.27	□□□□□ -1.25
MATR3-238	ENST00000512107	COX6B2	Q6YFQ2	88 aa		7.26	□□□□□ -1.25
MATR3-238	ENST00000512107	TRAV22	A0A0B4J277	110 aa		7.25	□□□□□ -1.25
MATR3-238	ENST00000512107	FAM236A	A0A1B0GUQ0	79 aa		7.24	□□□□□ -1.25
MATR3-238	ENST00000512107	FAM236B	A0A1B0GV22	79 aa		7.24	□□□□□ -1.25
MATR3-238	ENST00000512107		H0Y9P7	68 aa		7.24	□□□□□ -1.25
MATR3-238	ENST00000512107	KRTAP9-7	A8MTY7	169 aa		7.22	□□□□□ -1.25
MATR3-238	ENST00000512107	CYP4F30P	Q9H0H9	118 aa		7.22	□□□□□ -1.25
MATR3-238	ENST00000512107	C4orf26	Q17RF5	130 aa		7.21	□□□□□ -1.26
MATR3-238	ENST00000512107	KRTAP3-1	Q9BYR8	98 aa		7.21	□□□□□ -1.26
MATR3-238	ENST00000512107	RBM12B-AS1	Q9P1G2	102 aa		7.21	□□□□□ -1.26
MATR3-238	ENST00000512107	FAM236D	A0A1B0GTK5	79 aa		7.19	□□□□□ -1.26
MATR3-238	ENST00000512107	FAM236C	P0DP71	79 aa		7.19	□□□□□ -1.26
MATR3-238	ENST00000512107	SCGB1A1	P11684	91 aa		7.18	□□□□□ -1.26
MATR3-238	ENST00000512107	KLKP1	Q107X0	134 aa		7.17	□□□□□ -1.26
MATR3-238	ENST00000512107	C1orf64	Q8NEQ6	169 aa		7.16	□□□□□ -1.26
MATR3-238	ENST00000512107	LINC00208	Q96KT6	92 aa		7.16	□□□□□ -1.26
MATR3-238	ENST00000512107	LOC101927531	A0A1B0GV80	90 aa		7.15	□□□□□ -1.26
MATR3-238	ENST00000512107	ATOX1	O00244	68 aa		7.12	□□□□□ -1.27
MATR3-238	ENST00000512107	KRTAP10-6	P60371	365 aa	Predicted RBP	7.12	□□□□□ -1.27
MATR3-238	ENST00000512107	C5orf47	Q569G3	176 aa		7.12	□□□□□ -1.27
MATR3-238	ENST00000512107	TRAV7	A0A075B6U4	112 aa		7.11	□□□□□ -1.27
MATR3-238	ENST00000512107	LOR	P23490	312 aa	Predicted RBP	7.1	□□□□□ -1.27
MATR3-238	ENST00000512107	MP68	P56378	58 aa		7.09	□□□□□ -1.27
MATR3-238	ENST00000512107	H1FX-AS1	Q4G0G2	97 aa		7.09	□□□□□ -1.27
MATR3-238	ENST00000512107	KRTAP3-3	Q9BYR6	98 aa		7.09	□□□□□ -1.27
MATR3-238	ENST00000512107	KRTAP3-2	Q9BYR7	98 aa		7.09	□□□□□ -1.27
MATR3-238	ENST00000512107		M0R2T5	61 aa		7.08	□□□□□ -1.28
MATR3-238	ENST00000512107	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	7.04	□□□□□ -1.28
MATR3-238	ENST00000512107	SMIM20	Q8N5G0	67 aa		7.04	□□□□□ -1.28
MATR3-238	ENST00000512107		H3BPC8	53 aa		7.03	□□□□□ -1.28
MATR3-238	ENST00000512107	KRTAP9-8	Q9BYQ0	159 aa		7.02	□□□□□ -1.29
MATR3-238	ENST00000512107	SERP2	Q8N6R1	65 aa		7.01	□□□□□ -1.29
MATR3-238	ENST00000512107	SNURF	Q9Y675	71 aa		7.01	□□□□□ -1.29

Retrieved 100 of 20,778 RNA–protein pairs in 11 ms