RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 LYRM7Q5U5X0 104 aa8.34□□□□□ -1.07
PDLIM5-216ENST00000511767 A0A1B0GW54 56 aa8.33□□□□□ -1.08
PDLIM5-216ENST00000511767 PDE6GP18545 87 aa8.32□□□□□ -1.08
PDLIM5-216ENST00000511767 COX6B2Q6YFQ2 88 aa8.32□□□□□ -1.08
PDLIM5-216ENST00000511767 A0A1B0GVX0 72 aa8.31□□□□□ -1.08
PDLIM5-216ENST00000511767 J3KT08 172 aa8.3□□□□□ -1.08
PDLIM5-216ENST00000511767 C14orf132Q9NPU4 83 aa8.29□□□□□ -1.08
PDLIM5-216ENST00000511767 A0A1W2PPM0 123 aa8.28□□□□□ -1.08
PDLIM5-216ENST00000511767 C8orf87E5RJ46 101 aa8.28□□□□□ -1.08
PDLIM5-216ENST00000511767 LCE2DQ5TA82 110 aaPredicted RBP8.27□□□□□ -1.09
PDLIM5-216ENST00000511767 LORP23490 312 aaPredicted RBP8.26□□□□□ -1.09
PDLIM5-216ENST00000511767 KRTAP10-6P60371 365 aaPredicted RBP8.26□□□□□ -1.09
PDLIM5-216ENST00000511767 H3BT86 120 aa8.23□□□□□ -1.09
PDLIM5-216ENST00000511767 M0R2T5 61 aa8.23□□□□□ -1.09
PDLIM5-216ENST00000511767 NDUFB1O75438 58 aa8.23□□□□□ -1.09
PDLIM5-216ENST00000511767 A8MWP4 228 aa8.21□□□□□ -1.1
PDLIM5-216ENST00000511767 MTURNQ8N3F0 131 aa8.21□□□□□ -1.1
PDLIM5-216ENST00000511767 IGKV3D-7A0A0C4DH55 119 aa8.2□□□□□ -1.1
PDLIM5-216ENST00000511767 NREPQ16612 68 aa8.2□□□□□ -1.1
PDLIM5-216ENST00000511767 Q8N9P0 234 aaPredicted RBP8.19□□□□□ -1.1
PDLIM5-216ENST00000511767 C8orf17Q9NRJ1 99 aa8.17□□□□□ -1.1
PDLIM5-216ENST00000511767 PRR15Q8IV56 129 aa8.16□□□□□ -1.1
PDLIM5-216ENST00000511767 SPCS1Q9Y6A9 102 aa8.16□□□□□ -1.1
PDLIM5-216ENST00000511767 HRES1P13985 223 aa8.15□□□□□ -1.1
PDLIM5-216ENST00000511767 SMCPP49901 116 aaPredicted RBP8.15□□□□□ -1.1
PDLIM5-216ENST00000511767 MPLKIPQ8TAP9 179 aa8.15□□□□□ -1.1
PDLIM5-216ENST00000511767 ZCCHC13Q8WW36 166 aaKnown RBP8.15□□□□□ -1.1
PDLIM5-216ENST00000511767 COL5A1-AS1Q5SY13 56 aa8.14□□□□□ -1.11
PDLIM5-216ENST00000511767 KRTAP9-6A0A140TA67 174 aa8.1□□□□□ -1.11
PDLIM5-216ENST00000511767 Q6ZVQ6 151 aa8.1□□□□□ -1.11
PDLIM5-216ENST00000511767 SPINK7P58062 85 aa8.09□□□□□ -1.11
PDLIM5-216ENST00000511767 PRO0461Q9UI25 63 aa8.09□□□□□ -1.11
PDLIM5-216ENST00000511767 RBM12B-AS1Q9P1G2 102 aa8.07□□□□□ -1.12
PDLIM5-216ENST00000511767 MMP24-AS1A0A0U1RRL7 71 aa8.06□□□□□ -1.12
PDLIM5-216ENST00000511767 TMEM254Q8TBM7 123 aa8.05□□□□□ -1.12
PDLIM5-216ENST00000511767 FAM236DA0A1B0GTK5 79 aa8.04□□□□□ -1.12
PDLIM5-216ENST00000511767 K7EP34 96 aa8.04□□□□□ -1.12
PDLIM5-216ENST00000511767 K7EQZ3 153 aa8.04□□□□□ -1.12
PDLIM5-216ENST00000511767 BPY2O14599 106 aa8.04□□□□□ -1.12
PDLIM5-216ENST00000511767 FAM236CP0DP71 79 aa8.04□□□□□ -1.12
PDLIM5-216ENST00000511767 MRPL34Q9BQ48 92 aaKnown RBP8.04□□□□□ -1.12
PDLIM5-216ENST00000511767 KRTAP9-8Q9BYQ0 159 aa8.04□□□□□ -1.12
PDLIM5-216ENST00000511767 FSIP2Q5CZC0 6907 aa8.02□□□□□ -1.13
PDLIM5-216ENST00000511767 hDV103S1A0JD37 113 aa8.01□□□□□ -1.13
PDLIM5-216ENST00000511767 CRCT1Q9UGL9 99 aa8□□□□□ -1.13
PDLIM5-216ENST00000511767 PCP4L1A6NKN8 68 aa7.98□□□□□ -1.13
PDLIM5-216ENST00000511767 LINC00846Q9NV44 126 aa7.97□□□□□ -1.13
PDLIM5-216ENST00000511767 Q8N9L7 120 aa7.96□□□□□ -1.14
PDLIM5-216ENST00000511767 GTF2H5Q6ZYL4 71 aa7.95□□□□□ -1.14
PDLIM5-216ENST00000511767 Q5W150 140 aa7.94□□□□□ -1.14
PDLIM5-216ENST00000511767 F8W1H4 67 aa7.93□□□□□ -1.14
PDLIM5-216ENST00000511767 NDUFS5O43920 106 aa7.93□□□□□ -1.14
PDLIM5-216ENST00000511767 WFDC13Q8IUB5 93 aa7.91□□□□□ -1.14
PDLIM5-216ENST00000511767 UBL5Q9BZL1 73 aa7.91□□□□□ -1.14
PDLIM5-216ENST00000511767 CASC2Q6XLA1 102 aa7.9□□□□□ -1.14
PDLIM5-216ENST00000511767 MT2AP02795 61 aa7.89□□□□□ -1.15
PDLIM5-216ENST00000511767 ETDBQ3ZM63 59 aa7.88□□□□□ -1.15
PDLIM5-216ENST00000511767 HCG22E2RYF7 251 aa7.85□□□□□ -1.15
PDLIM5-216ENST00000511767 MT1FP04733 61 aa7.82□□□□□ -1.16
PDLIM5-216ENST00000511767 IGKV2D-30A0A075B6S6 120 aa7.81□□□□□ -1.16
PDLIM5-216ENST00000511767 IGKV2-30P06310 120 aa7.81□□□□□ -1.16
PDLIM5-216ENST00000511767 CXCL6P80162 114 aa7.81□□□□□ -1.16
PDLIM5-216ENST00000511767 KRTAP9-3Q9BYQ3 159 aa7.79□□□□□ -1.16
PDLIM5-216ENST00000511767 USH2AO75445 5202 aa7.78□□□□□ -1.16
PDLIM5-216ENST00000511767 KRTAP10-10P60014 251 aa7.78□□□□□ -1.16
PDLIM5-216ENST00000511767 H1FX-AS1Q4G0G2 97 aa7.78□□□□□ -1.16
PDLIM5-216ENST00000511767 C7orf65Q6ZTY9 151 aa7.77□□□□□ -1.17
PDLIM5-216ENST00000511767 SSPOA2VEC9 5147 aa7.72□□□□□ -1.17
PDLIM5-216ENST00000511767 LCE2BO14633 110 aa7.72□□□□□ -1.17
PDLIM5-216ENST00000511767 C4orf26Q17RF5 130 aa7.7□□□□□ -1.18
PDLIM5-216ENST00000511767 ACYP1P07311 99 aa7.69□□□□□ -1.18
PDLIM5-216ENST00000511767 TP53AIP1Q9HCN2 124 aa7.69□□□□□ -1.18
PDLIM5-216ENST00000511767 KRTAP3-1Q9BYR8 98 aa7.66□□□□□ -1.18
PDLIM5-216ENST00000511767 FAM240AA0A1B0GVK7 77 aa7.64□□□□□ -1.19
PDLIM5-216ENST00000511767 C1orf64Q8NEQ6 169 aa7.58□□□□□ -1.2
PDLIM5-216ENST00000511767 A0A1B0GV90 55 aa7.57□□□□□ -1.2
PDLIM5-216ENST00000511767 CYP4F30PQ9H0H9 118 aa7.56□□□□□ -1.2
PDLIM5-216ENST00000511767 ATP5EP2Q5VTU8 51 aa7.55□□□□□ -1.2
PDLIM5-216ENST00000511767 HIST1H4AP62805 103 aaKnown RBP7.52□□□□□ -1.21
PDLIM5-216ENST00000511767 LINC00643Q86TS7 51 aa7.52□□□□□ -1.21
PDLIM5-216ENST00000511767 KRTAP19-1Q8IUB9 90 aa7.52□□□□□ -1.21
PDLIM5-216ENST00000511767 C5orf47Q569G3 176 aa7.49□□□□□ -1.21
PDLIM5-216ENST00000511767 FCGBPQ9Y6R7 5405 aaPredicted RBP7.48□□□□□ -1.21
PDLIM5-216ENST00000511767 TRAV22A0A0B4J277 110 aa7.48□□□□□ -1.21
PDLIM5-216ENST00000511767 UQCRQO14949 82 aa7.47□□□□□ -1.21
PDLIM5-216ENST00000511767 S4R3F8 94 aa7.47□□□□□ -1.21
PDLIM5-216ENST00000511767 LOC101927531A0A1B0GV80 90 aa7.46□□□□□ -1.22
PDLIM5-216ENST00000511767 CSAG1Q6PB30 78 aa7.46□□□□□ -1.22
PDLIM5-216ENST00000511767 LCA10Q71F78 164 aa7.46□□□□□ -1.22
PDLIM5-216ENST00000511767 A0A087WVE0 104 aa7.45□□□□□ -1.22
PDLIM5-216ENST00000511767 KRTAP3-3Q9BYR6 98 aa7.43□□□□□ -1.22
PDLIM5-216ENST00000511767 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.42□□□□□ -1.22
PDLIM5-216ENST00000511767 KRTAP19-6Q3LI70 58 aa7.41□□□□□ -1.22
PDLIM5-216ENST00000511767 H0Y9P7 68 aa7.4□□□□□ -1.22
PDLIM5-216ENST00000511767 ATOX1O00244 68 aa7.38□□□□□ -1.23
PDLIM5-216ENST00000511767 OCR1Q9BZK8 76 aa7.35□□□□□ -1.23
PDLIM5-216ENST00000511767 FAM236AA0A1B0GUQ0 79 aa7.33□□□□□ -1.24
PDLIM5-216ENST00000511767 FAM236BA0A1B0GV22 79 aa7.33□□□□□ -1.24
PDLIM5-216ENST00000511767 J3QR89 54 aa7.33□□□□□ -1.24
PDLIM5-216ENST00000511767 LINC00208Q96KT6 92 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms