RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 TRBV20-1A0A075B6N2 111 aa9.69□□□□□ -0.86
UBE3D-207ENST00000509102 C9JAW5 83 aa9.69□□□□□ -0.86
UBE3D-207ENST00000509102 SMIM6P0DI80 62 aa9.69□□□□□ -0.86
UBE3D-207ENST00000509102 ATXN8Q156A1 80 aa9.69□□□□□ -0.86
UBE3D-207ENST00000509102 DEFB116Q30KQ4 102 aa9.69□□□□□ -0.86
UBE3D-207ENST00000509102 LINC00472Q9H8W2 130 aa9.69□□□□□ -0.86
UBE3D-207ENST00000509102 IGHV6-1A0A0B4J1U7 121 aa9.66□□□□□ -0.86
UBE3D-207ENST00000509102 LYRM7Q5U5X0 104 aa9.65□□□□□ -0.86
UBE3D-207ENST00000509102 JMJD7-PLA2G4BH0Y9G9 81 aa9.64□□□□□ -0.87
UBE3D-207ENST00000509102 KRTAP10-6P60371 365 aaPredicted RBP9.63□□□□□ -0.87
UBE3D-207ENST00000509102 C8orf87E5RJ46 101 aa9.62□□□□□ -0.87
UBE3D-207ENST00000509102 TSTD3H0UI37 97 aa9.62□□□□□ -0.87
UBE3D-207ENST00000509102 J3KT08 172 aa9.62□□□□□ -0.87
UBE3D-207ENST00000509102 NAA38Q9BRA0 125 aaKnown RBP9.62□□□□□ -0.87
UBE3D-207ENST00000509102 KRTAP16-1A8MUX0 517 aa9.6□□□□□ -0.87
UBE3D-207ENST00000509102 A0A1B0GVX0 72 aa9.59□□□□□ -0.87
UBE3D-207ENST00000509102 PDE6GP18545 87 aa9.59□□□□□ -0.87
UBE3D-207ENST00000509102 NOTCH2NLQ7Z3S9 236 aa9.58□□□□□ -0.88
UBE3D-207ENST00000509102 A0A1B0GW54 56 aa9.57□□□□□ -0.88
UBE3D-207ENST00000509102 NDUFB1O75438 58 aa9.57□□□□□ -0.88
UBE3D-207ENST00000509102 Q6ZQT0 140 aa9.57□□□□□ -0.88
UBE3D-207ENST00000509102 LOC110117498A0A087WWA1 95 aa9.55□□□□□ -0.88
UBE3D-207ENST00000509102 BATFQ16520 125 aa9.55□□□□□ -0.88
UBE3D-207ENST00000509102 FLGP20930 4061 aaPredicted RBP9.53□□□□□ -0.88
UBE3D-207ENST00000509102 FAM236DA0A1B0GTK5 79 aa9.52□□□□□ -0.89
UBE3D-207ENST00000509102 FAM236CP0DP71 79 aa9.52□□□□□ -0.89
UBE3D-207ENST00000509102 RBM12B-AS1Q9P1G2 102 aa9.51□□□□□ -0.89
UBE3D-207ENST00000509102 C14orf132Q9NPU4 83 aa9.49□□□□□ -0.89
UBE3D-207ENST00000509102 A8MWP4 228 aa9.46□□□□□ -0.9
UBE3D-207ENST00000509102 CRCT1Q9UGL9 99 aa9.45□□□□□ -0.9
UBE3D-207ENST00000509102 NREPQ16612 68 aa9.44□□□□□ -0.9
UBE3D-207ENST00000509102 ZCCHC13Q8WW36 166 aaKnown RBP9.44□□□□□ -0.9
UBE3D-207ENST00000509102 C9orf118A6NHY6 69 aa9.43□□□□□ -0.9
UBE3D-207ENST00000509102 MTURNQ8N3F0 131 aa9.42□□□□□ -0.9
UBE3D-207ENST00000509102 H3BT86 120 aa9.41□□□□□ -0.9
UBE3D-207ENST00000509102 C8orf17Q9NRJ1 99 aa9.41□□□□□ -0.9
UBE3D-207ENST00000509102 FSIP2Q5CZC0 6907 aa9.4□□□□□ -0.9
UBE3D-207ENST00000509102 A0A1W2PPM0 123 aa9.39□□□□□ -0.91
UBE3D-207ENST00000509102 HRES1P13985 223 aa9.39□□□□□ -0.91
UBE3D-207ENST00000509102 LCE1DQ5T752 114 aa9.39□□□□□ -0.91
UBE3D-207ENST00000509102 Q8N9P0 234 aaPredicted RBP9.39□□□□□ -0.91
UBE3D-207ENST00000509102 IGKV3D-7A0A0C4DH55 119 aa9.38□□□□□ -0.91
UBE3D-207ENST00000509102 KRTAP4-7Q9BYR0 210 aa9.38□□□□□ -0.91
UBE3D-207ENST00000509102 LOC105371267A0A1B0GV96 52 aa9.37□□□□□ -0.91
UBE3D-207ENST00000509102 MPLKIPQ8TAP9 179 aa9.37□□□□□ -0.91
UBE3D-207ENST00000509102 TAX1BP3O14907 124 aa9.36□□□□□ -0.91
UBE3D-207ENST00000509102 Q6ZVQ6 151 aa9.36□□□□□ -0.91
UBE3D-207ENST00000509102 PRR15Q8IV56 129 aa9.36□□□□□ -0.91
UBE3D-207ENST00000509102 SPINK7P58062 85 aa9.34□□□□□ -0.91
UBE3D-207ENST00000509102 TMEM254Q8TBM7 123 aa9.28□□□□□ -0.92
UBE3D-207ENST00000509102 MRPL34Q9BQ48 92 aaKnown RBP9.28□□□□□ -0.92
UBE3D-207ENST00000509102 SPCS1Q9Y6A9 102 aa9.28□□□□□ -0.92
UBE3D-207ENST00000509102 BPY2O14599 106 aa9.27□□□□□ -0.93
UBE3D-207ENST00000509102 KRTAP9-8Q9BYQ0 159 aa9.26□□□□□ -0.93
UBE3D-207ENST00000509102 MMP24-AS1A0A0U1RRL7 71 aa9.25□□□□□ -0.93
UBE3D-207ENST00000509102 hDV103S1A0JD37 113 aa9.25□□□□□ -0.93
UBE3D-207ENST00000509102 K7EQZ3 153 aa9.24□□□□□ -0.93
UBE3D-207ENST00000509102 NDUFS5O43920 106 aa9.24□□□□□ -0.93
UBE3D-207ENST00000509102 WFDC13Q8IUB5 93 aa9.23□□□□□ -0.93
UBE3D-207ENST00000509102 COL5A1-AS1Q5SY13 56 aa9.21□□□□□ -0.94
UBE3D-207ENST00000509102 MT2AP02795 61 aa9.15□□□□□ -0.94
UBE3D-207ENST00000509102 KRTAP19-4Q3LI73 84 aa9.15□□□□□ -0.94
UBE3D-207ENST00000509102 KRTAP4-9Q9BYQ8 210 aa9.14□□□□□ -0.95
UBE3D-207ENST00000509102 UBL5Q9BZL1 73 aa9.13□□□□□ -0.95
UBE3D-207ENST00000509102 KRTAP10-10P60014 251 aa9.12□□□□□ -0.95
UBE3D-207ENST00000509102 CASC2Q6XLA1 102 aa9.12□□□□□ -0.95
UBE3D-207ENST00000509102 K7EP34 96 aa9.1□□□□□ -0.95
UBE3D-207ENST00000509102 Q8N9L7 120 aa9.09□□□□□ -0.95
UBE3D-207ENST00000509102 H3BS24 57 aa9.08□□□□□ -0.96
UBE3D-207ENST00000509102 IGKV2D-30A0A075B6S6 120 aa9.07□□□□□ -0.96
UBE3D-207ENST00000509102 MT1FP04733 61 aa9.07□□□□□ -0.96
UBE3D-207ENST00000509102 IGKV2-30P06310 120 aa9.07□□□□□ -0.96
UBE3D-207ENST00000509102 C7orf65Q6ZTY9 151 aa9.07□□□□□ -0.96
UBE3D-207ENST00000509102 HCG22E2RYF7 251 aa9.05□□□□□ -0.96
UBE3D-207ENST00000509102 GTF2H5Q6ZYL4 71 aa9.05□□□□□ -0.96
UBE3D-207ENST00000509102 PRO0461Q9UI25 63 aa9.05□□□□□ -0.96
UBE3D-207ENST00000509102 LINC00846Q9NV44 126 aa9.04□□□□□ -0.96
UBE3D-207ENST00000509102 CXCL6P80162 114 aa9.03□□□□□ -0.96
UBE3D-207ENST00000509102 H1FX-AS1Q4G0G2 97 aa9.03□□□□□ -0.96
UBE3D-207ENST00000509102 Q5W150 140 aa9□□□□□ -0.97
UBE3D-207ENST00000509102 USH2AO75445 5202 aa9□□□□□ -0.97
UBE3D-207ENST00000509102 KRTAP4-2Q9BYR5 136 aa8.98□□□□□ -0.97
UBE3D-207ENST00000509102 F8W1H4 67 aa8.97□□□□□ -0.97
UBE3D-207ENST00000509102 KRTAP9-3Q9BYQ3 159 aa8.97□□□□□ -0.97
UBE3D-207ENST00000509102 PCP4L1A6NKN8 68 aa8.94□□□□□ -0.98
UBE3D-207ENST00000509102 LCE4AQ5TA78 99 aa8.91□□□□□ -0.98
UBE3D-207ENST00000509102 SSPOA2VEC9 5147 aa8.9□□□□□ -0.98
UBE3D-207ENST00000509102 ETDBQ3ZM63 59 aa8.89□□□□□ -0.99
UBE3D-207ENST00000509102 C4orf26Q17RF5 130 aa8.88□□□□□ -0.99
UBE3D-207ENST00000509102 TP53AIP1Q9HCN2 124 aa8.88□□□□□ -0.99
UBE3D-207ENST00000509102 KRTAP4-11Q9BYQ6 195 aa8.78□□□□□ -1
UBE3D-207ENST00000509102 ACYP1P07311 99 aa8.77□□□□□ -1.01
UBE3D-207ENST00000509102 C1orf64Q8NEQ6 169 aa8.74□□□□□ -1.01
UBE3D-207ENST00000509102 S4R3F8 94 aa8.73□□□□□ -1.01
UBE3D-207ENST00000509102 FCGBPQ9Y6R7 5405 aaPredicted RBP8.72□□□□□ -1.01
UBE3D-207ENST00000509102 C5orf47Q569G3 176 aa8.72□□□□□ -1.01
UBE3D-207ENST00000509102 ATP5EP2Q5VTU8 51 aa8.7□□□□□ -1.02
UBE3D-207ENST00000509102 FAM240AA0A1B0GVK7 77 aa8.69□□□□□ -1.02
UBE3D-207ENST00000509102 FAM236AA0A1B0GUQ0 79 aa8.68□□□□□ -1.02
UBE3D-207ENST00000509102 FAM236BA0A1B0GV22 79 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms