RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 CCKP06307 115 aa7.68□□□□□ -1.18
UBE2D3-228ENST00000508974 VPS25Q9BRG1 176 aa7.68□□□□□ -1.18
UBE2D3-228ENST00000508974 TRACP01848 142 aa7.67□□□□□ -1.18
UBE2D3-228ENST00000508974 UBE2V1Q13404 147 aa7.65□□□□□ -1.18
UBE2D3-228ENST00000508974 LINC00313P59037 77 aa7.64□□□□□ -1.19
UBE2D3-228ENST00000508974 NOTCH2NLQ7Z3S9 236 aa7.62□□□□□ -1.19
UBE2D3-228ENST00000508974 IGHV6-1A0A0B4J1U7 121 aa7.61□□□□□ -1.19
UBE2D3-228ENST00000508974 RBM3P98179 157 aaKnown RBP7.61□□□□□ -1.19
UBE2D3-228ENST00000508974 NAA38Q9BRA0 125 aaKnown RBP7.61□□□□□ -1.19
UBE2D3-228ENST00000508974 LINC00472Q9H8W2 130 aa7.61□□□□□ -1.19
UBE2D3-228ENST00000508974 FSIP2Q5CZC0 6907 aa7.6□□□□□ -1.19
UBE2D3-228ENST00000508974 KRTAP16-1A8MUX0 517 aa7.6□□□□□ -1.19
UBE2D3-228ENST00000508974 DSCR8Q96T75 97 aa7.6□□□□□ -1.19
UBE2D3-228ENST00000508974 KRTAP4-2Q9BYR5 136 aa7.6□□□□□ -1.19
UBE2D3-228ENST00000508974 BAALC-AS2P0C853 105 aa7.59□□□□□ -1.19
UBE2D3-228ENST00000508974 CRCT1Q9UGL9 99 aa7.58□□□□□ -1.2
UBE2D3-228ENST00000508974 TRBV20-1A0A075B6N2 111 aa7.57□□□□□ -1.2
UBE2D3-228ENST00000508974 KRTAP9-3Q9BYQ3 159 aa7.57□□□□□ -1.2
UBE2D3-228ENST00000508974 M0R143 59 aa7.56□□□□□ -1.2
UBE2D3-228ENST00000508974 LCE5AQ5TCM9 118 aa7.56□□□□□ -1.2
UBE2D3-228ENST00000508974 KRTAP4-11Q9BYQ6 195 aa7.56□□□□□ -1.2
UBE2D3-228ENST00000508974 C9JAW5 83 aa7.55□□□□□ -1.2
UBE2D3-228ENST00000508974 A0A1B0GVX0 72 aa7.53□□□□□ -1.2
UBE2D3-228ENST00000508974 ATXN8Q156A1 80 aa7.53□□□□□ -1.2
UBE2D3-228ENST00000508974 FAM236DA0A1B0GTK5 79 aa7.51□□□□□ -1.21
UBE2D3-228ENST00000508974 FAM236CP0DP71 79 aa7.51□□□□□ -1.21
UBE2D3-228ENST00000508974 C8orf87E5RJ46 101 aa7.49□□□□□ -1.21
UBE2D3-228ENST00000508974 SMIM6P0DI80 62 aa7.49□□□□□ -1.21
UBE2D3-228ENST00000508974 BATFQ16520 125 aa7.49□□□□□ -1.21
UBE2D3-228ENST00000508974 Q6ZQT0 140 aa7.49□□□□□ -1.21
UBE2D3-228ENST00000508974 JMJD7-PLA2G4BH0Y9G9 81 aa7.46□□□□□ -1.22
UBE2D3-228ENST00000508974 J3KT08 172 aa7.46□□□□□ -1.22
UBE2D3-228ENST00000508974 C14orf132Q9NPU4 83 aa7.46□□□□□ -1.22
UBE2D3-228ENST00000508974 HRES1P13985 223 aa7.45□□□□□ -1.22
UBE2D3-228ENST00000508974 C21orf62-AS1Q17RA5 79 aa7.45□□□□□ -1.22
UBE2D3-228ENST00000508974 RBM12B-AS1Q9P1G2 102 aa7.44□□□□□ -1.22
UBE2D3-228ENST00000508974 LOC110117498A0A087WWA1 95 aa7.43□□□□□ -1.22
UBE2D3-228ENST00000508974 TSTD3H0UI37 97 aa7.43□□□□□ -1.22
UBE2D3-228ENST00000508974 NDUFB1O75438 58 aa7.43□□□□□ -1.22
UBE2D3-228ENST00000508974 LYRM7Q5U5X0 104 aa7.42□□□□□ -1.22
UBE2D3-228ENST00000508974 ZCCHC13Q8WW36 166 aaKnown RBP7.41□□□□□ -1.22
UBE2D3-228ENST00000508974 MPLKIPQ8TAP9 179 aa7.4□□□□□ -1.22
UBE2D3-228ENST00000508974 KRTAP9-8Q9BYQ0 159 aa7.4□□□□□ -1.22
UBE2D3-228ENST00000508974 C8orf17Q9NRJ1 99 aa7.39□□□□□ -1.23
UBE2D3-228ENST00000508974 IGKV3D-7A0A0C4DH55 119 aa7.38□□□□□ -1.23
UBE2D3-228ENST00000508974 A8MWP4 228 aa7.38□□□□□ -1.23
UBE2D3-228ENST00000508974 PDE6GP18545 87 aa7.38□□□□□ -1.23
UBE2D3-228ENST00000508974 MTURNQ8N3F0 131 aa7.38□□□□□ -1.23
UBE2D3-228ENST00000508974 SPINK7P58062 85 aa7.36□□□□□ -1.23
UBE2D3-228ENST00000508974 A0A1B0GW54 56 aa7.35□□□□□ -1.23
UBE2D3-228ENST00000508974 NREPQ16612 68 aa7.35□□□□□ -1.23
UBE2D3-228ENST00000508974 Q8N9P0 234 aaPredicted RBP7.35□□□□□ -1.23
UBE2D3-228ENST00000508974 C9orf118A6NHY6 69 aa7.33□□□□□ -1.24
UBE2D3-228ENST00000508974 Q6ZVQ6 151 aa7.33□□□□□ -1.24
UBE2D3-228ENST00000508974 LOC105371267A0A1B0GV96 52 aa7.32□□□□□ -1.24
UBE2D3-228ENST00000508974 TAX1BP3O14907 124 aa7.32□□□□□ -1.24
UBE2D3-228ENST00000508974 MT2AP02795 61 aa7.32□□□□□ -1.24
UBE2D3-228ENST00000508974 A0A1W2PPM0 123 aa7.31□□□□□ -1.24
UBE2D3-228ENST00000508974 PRR15Q8IV56 129 aa7.31□□□□□ -1.24
UBE2D3-228ENST00000508974 KRTAP3-1Q9BYR8 98 aa7.3□□□□□ -1.24
UBE2D3-228ENST00000508974 MMP24-AS1A0A0U1RRL7 71 aa7.29□□□□□ -1.24
UBE2D3-228ENST00000508974 H3BT86 120 aa7.29□□□□□ -1.24
UBE2D3-228ENST00000508974 WFDC13Q8IUB5 93 aa7.28□□□□□ -1.24
UBE2D3-228ENST00000508974 K7EQZ3 153 aa7.27□□□□□ -1.25
UBE2D3-228ENST00000508974 MT1FP04733 61 aa7.27□□□□□ -1.25
UBE2D3-228ENST00000508974 MRPL34Q9BQ48 92 aaKnown RBP7.26□□□□□ -1.25
UBE2D3-228ENST00000508974 USH2AO75445 5202 aa7.25□□□□□ -1.25
UBE2D3-228ENST00000508974 NDUFS5O43920 106 aa7.25□□□□□ -1.25
UBE2D3-228ENST00000508974 TMEM254Q8TBM7 123 aa7.25□□□□□ -1.25
UBE2D3-228ENST00000508974 KRTAP10-10P60014 251 aa7.24□□□□□ -1.25
UBE2D3-228ENST00000508974 hDV103S1A0JD37 113 aa7.23□□□□□ -1.25
UBE2D3-228ENST00000508974 BPY2O14599 106 aa7.22□□□□□ -1.25
UBE2D3-228ENST00000508974 SPCS1Q9Y6A9 102 aa7.22□□□□□ -1.25
UBE2D3-228ENST00000508974 Q8N9L7 120 aa7.2□□□□□ -1.26
UBE2D3-228ENST00000508974 SSPOA2VEC9 5147 aa7.19□□□□□ -1.26
UBE2D3-228ENST00000508974 IGKV2D-30A0A075B6S6 120 aa7.15□□□□□ -1.26
UBE2D3-228ENST00000508974 IGKV2-30P06310 120 aa7.15□□□□□ -1.26
UBE2D3-228ENST00000508974 Q5W150 140 aa7.13□□□□□ -1.27
UBE2D3-228ENST00000508974 CASC2Q6XLA1 102 aa7.13□□□□□ -1.27
UBE2D3-228ENST00000508974 HCG22E2RYF7 251 aa7.11□□□□□ -1.27
UBE2D3-228ENST00000508974 COL5A1-AS1Q5SY13 56 aa7.11□□□□□ -1.27
UBE2D3-228ENST00000508974 C7orf65Q6ZTY9 151 aa7.09□□□□□ -1.27
UBE2D3-228ENST00000508974 LINC00846Q9NV44 126 aa7.09□□□□□ -1.27
UBE2D3-228ENST00000508974 PRO0461Q9UI25 63 aa7.09□□□□□ -1.27
UBE2D3-228ENST00000508974 K7EP34 96 aa7.08□□□□□ -1.28
UBE2D3-228ENST00000508974 H1FX-AS1Q4G0G2 97 aa7.08□□□□□ -1.28
UBE2D3-228ENST00000508974 UBL5Q9BZL1 73 aa7.06□□□□□ -1.28
UBE2D3-228ENST00000508974 FCGBPQ9Y6R7 5405 aaPredicted RBP7.02□□□□□ -1.29
UBE2D3-228ENST00000508974 C4orf26Q17RF5 130 aa7.02□□□□□ -1.29
UBE2D3-228ENST00000508974 CXCL6P80162 114 aa7.01□□□□□ -1.29
UBE2D3-228ENST00000508974 PCP4L1A6NKN8 68 aa6.99□□□□□ -1.29
UBE2D3-228ENST00000508974 GTF2H5Q6ZYL4 71 aa6.96□□□□□ -1.3
UBE2D3-228ENST00000508974 ETDBQ3ZM63 59 aa6.94□□□□□ -1.3
UBE2D3-228ENST00000508974 F8W1H4 67 aa6.91□□□□□ -1.3
UBE2D3-228ENST00000508974 C5orf47Q569G3 176 aa6.91□□□□□ -1.3
UBE2D3-228ENST00000508974 KRTAP19-6Q3LI70 58 aa6.87□□□□□ -1.31
UBE2D3-228ENST00000508974 C1orf64Q8NEQ6 169 aa6.87□□□□□ -1.31
UBE2D3-228ENST00000508974 S4R3F8 94 aa6.86□□□□□ -1.31
UBE2D3-228ENST00000508974 TP53AIP1Q9HCN2 124 aa6.85□□□□□ -1.31
UBE2D3-228ENST00000508974 FAM236AA0A1B0GUQ0 79 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms