RNA–Protein interactions for RNA: ENST00000508473.5

SRPK1-210, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-210ENST00000508473 C9orf118A6NHY6 69 aa12.47□□□□□ -0.41
SRPK1-210ENST00000508473 C21orf62-AS1Q17RA5 79 aa12.47□□□□□ -0.41
SRPK1-210ENST00000508473 A0A1B0GVX0 72 aa12.46□□□□□ -0.41
SRPK1-210ENST00000508473 TAX1BP3O14907 124 aa12.46□□□□□ -0.41
SRPK1-210ENST00000508473 M0R2T5 61 aa12.44□□□□□ -0.42
SRPK1-210ENST00000508473 J3KT08 172 aa12.43□□□□□ -0.42
SRPK1-210ENST00000508473 C8orf87E5RJ46 101 aa12.42□□□□□ -0.42
SRPK1-210ENST00000508473 PDE6GP18545 87 aa12.42□□□□□ -0.42
SRPK1-210ENST00000508473 A0A1W2PPM0 123 aa12.41□□□□□ -0.42
SRPK1-210ENST00000508473 MTURNQ8N3F0 131 aa12.39□□□□□ -0.43
SRPK1-210ENST00000508473 FLGP20930 4061 aaPredicted RBP12.37□□□□□ -0.43
SRPK1-210ENST00000508473 A0A1B0GW54 56 aa12.37□□□□□ -0.43
SRPK1-210ENST00000508473 KRTAP10-6P60371 365 aaPredicted RBP12.37□□□□□ -0.43
SRPK1-210ENST00000508473 H3BT86 120 aa12.34□□□□□ -0.43
SRPK1-210ENST00000508473 NDUFB1O75438 58 aa12.34□□□□□ -0.43
SRPK1-210ENST00000508473 LORP23490 312 aaPredicted RBP12.34□□□□□ -0.43
SRPK1-210ENST00000508473 LCE2DQ5TA82 110 aaPredicted RBP12.32□□□□□ -0.44
SRPK1-210ENST00000508473 A8MWP4 228 aa12.3□□□□□ -0.44
SRPK1-210ENST00000508473 NREPQ16612 68 aa12.28□□□□□ -0.44
SRPK1-210ENST00000508473 IGKV3D-7A0A0C4DH55 119 aa12.27□□□□□ -0.45
SRPK1-210ENST00000508473 C8orf17Q9NRJ1 99 aa12.27□□□□□ -0.45
SRPK1-210ENST00000508473 SPCS1Q9Y6A9 102 aa12.26□□□□□ -0.45
SRPK1-210ENST00000508473 ZCCHC13Q8WW36 166 aaKnown RBP12.22□□□□□ -0.45
SRPK1-210ENST00000508473 CRCT1Q9UGL9 99 aa12.22□□□□□ -0.45
SRPK1-210ENST00000508473 HRES1P13985 223 aa12.2□□□□□ -0.46
SRPK1-210ENST00000508473 FAM236DA0A1B0GTK5 79 aa12.19□□□□□ -0.46
SRPK1-210ENST00000508473 FAM236CP0DP71 79 aa12.19□□□□□ -0.46
SRPK1-210ENST00000508473 COL5A1-AS1Q5SY13 56 aa12.19□□□□□ -0.46
SRPK1-210ENST00000508473 PRR15Q8IV56 129 aa12.19□□□□□ -0.46
SRPK1-210ENST00000508473 Q8N9P0 234 aaPredicted RBP12.19□□□□□ -0.46
SRPK1-210ENST00000508473 FSIP2Q5CZC0 6907 aa12.17□□□□□ -0.46
SRPK1-210ENST00000508473 Q6ZVQ6 151 aa12.16□□□□□ -0.46
SRPK1-210ENST00000508473 SMCPP49901 116 aaPredicted RBP12.15□□□□□ -0.46
SRPK1-210ENST00000508473 RBM12B-AS1Q9P1G2 102 aa12.15□□□□□ -0.46
SRPK1-210ENST00000508473 MPLKIPQ8TAP9 179 aa12.13□□□□□ -0.47
SRPK1-210ENST00000508473 MMP24-AS1A0A0U1RRL7 71 aa12.1□□□□□ -0.47
SRPK1-210ENST00000508473 K7EQZ3 153 aa12.1□□□□□ -0.47
SRPK1-210ENST00000508473 SPINK7P58062 85 aa12.1□□□□□ -0.47
SRPK1-210ENST00000508473 K7EP34 96 aa12.07□□□□□ -0.48
SRPK1-210ENST00000508473 BPY2O14599 106 aa12.07□□□□□ -0.48
SRPK1-210ENST00000508473 TMEM254Q8TBM7 123 aa12.06□□□□□ -0.48
SRPK1-210ENST00000508473 MRPL34Q9BQ48 92 aaKnown RBP12.06□□□□□ -0.48
SRPK1-210ENST00000508473 PRO0461Q9UI25 63 aa12.06□□□□□ -0.48
SRPK1-210ENST00000508473 PCP4L1A6NKN8 68 aa12.03□□□□□ -0.48
SRPK1-210ENST00000508473 hDV103S1A0JD37 113 aa12.02□□□□□ -0.49
SRPK1-210ENST00000508473 NDUFS5O43920 106 aa11.99□□□□□ -0.49
SRPK1-210ENST00000508473 Q8N9L7 120 aa11.98□□□□□ -0.49
SRPK1-210ENST00000508473 KRTAP9-8Q9BYQ0 159 aa11.96□□□□□ -0.49
SRPK1-210ENST00000508473 WFDC13Q8IUB5 93 aa11.93□□□□□ -0.5
SRPK1-210ENST00000508473 LINC00846Q9NV44 126 aa11.93□□□□□ -0.5
SRPK1-210ENST00000508473 GTF2H5Q6ZYL4 71 aa11.91□□□□□ -0.5
SRPK1-210ENST00000508473 UBL5Q9BZL1 73 aa11.88□□□□□ -0.51
SRPK1-210ENST00000508473 CASC2Q6XLA1 102 aa11.87□□□□□ -0.51
SRPK1-210ENST00000508473 Q5W150 140 aa11.83□□□□□ -0.52
SRPK1-210ENST00000508473 HCG22E2RYF7 251 aa11.82□□□□□ -0.52
SRPK1-210ENST00000508473 MT2AP02795 61 aa11.82□□□□□ -0.52
SRPK1-210ENST00000508473 F8W1H4 67 aa11.81□□□□□ -0.52
SRPK1-210ENST00000508473 IGKV2D-30A0A075B6S6 120 aa11.79□□□□□ -0.52
SRPK1-210ENST00000508473 IGKV2-30P06310 120 aa11.79□□□□□ -0.52
SRPK1-210ENST00000508473 ETDBQ3ZM63 59 aa11.79□□□□□ -0.52
SRPK1-210ENST00000508473 MT1FP04733 61 aa11.74□□□□□ -0.53
SRPK1-210ENST00000508473 C7orf65Q6ZTY9 151 aa11.72□□□□□ -0.53
SRPK1-210ENST00000508473 KRTAP10-10P60014 251 aa11.69□□□□□ -0.54
SRPK1-210ENST00000508473 CXCL6P80162 114 aa11.69□□□□□ -0.54
SRPK1-210ENST00000508473 H1FX-AS1Q4G0G2 97 aa11.64□□□□□ -0.55
SRPK1-210ENST00000508473 KRTAP9-3Q9BYQ3 159 aa11.58□□□□□ -0.56
SRPK1-210ENST00000508473 USH2AO75445 5202 aa11.58□□□□□ -0.56
SRPK1-210ENST00000508473 C4orf26Q17RF5 130 aa11.56□□□□□ -0.56
SRPK1-210ENST00000508473 LCE2BO14633 110 aa11.52□□□□□ -0.57
SRPK1-210ENST00000508473 TP53AIP1Q9HCN2 124 aa11.49□□□□□ -0.57
SRPK1-210ENST00000508473 ACYP1P07311 99 aa11.48□□□□□ -0.57
SRPK1-210ENST00000508473 SSPOA2VEC9 5147 aa11.46□□□□□ -0.58
SRPK1-210ENST00000508473 FAM240AA0A1B0GVK7 77 aa11.42□□□□□ -0.58
SRPK1-210ENST00000508473 KRTAP9-7A8MTY7 169 aa11.4□□□□□ -0.58
SRPK1-210ENST00000508473 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.39□□□□□ -0.59
SRPK1-210ENST00000508473 KRTAP3-1Q9BYR8 98 aa11.38□□□□□ -0.59
SRPK1-210ENST00000508473 A0A1B0GV90 55 aa11.35□□□□□ -0.59
SRPK1-210ENST00000508473 HIST1H4AP62805 103 aaKnown RBP11.35□□□□□ -0.59
SRPK1-210ENST00000508473 ATP5EP2Q5VTU8 51 aa11.35□□□□□ -0.59
SRPK1-210ENST00000508473 C1orf64Q8NEQ6 169 aa11.35□□□□□ -0.59
SRPK1-210ENST00000508473 C5orf47Q569G3 176 aa11.3□□□□□ -0.6
SRPK1-210ENST00000508473 KRTAP19-1Q8IUB9 90 aa11.28□□□□□ -0.6
SRPK1-210ENST00000508473 TRAV22A0A0B4J277 110 aa11.27□□□□□ -0.61
SRPK1-210ENST00000508473 CYP4F30PQ9H0H9 118 aa11.27□□□□□ -0.61
SRPK1-210ENST00000508473 S4R3F8 94 aa11.27□□□□□ -0.61
SRPK1-210ENST00000508473 LINC00643Q86TS7 51 aa11.23□□□□□ -0.61
SRPK1-210ENST00000508473 A0A087WVE0 104 aa11.21□□□□□ -0.61
SRPK1-210ENST00000508473 LOC101927531A0A1B0GV80 90 aa11.2□□□□□ -0.62
SRPK1-210ENST00000508473 LCA10Q71F78 164 aa11.2□□□□□ -0.62
SRPK1-210ENST00000508473 UQCRQO14949 82 aa11.18□□□□□ -0.62
SRPK1-210ENST00000508473 CSAG1Q6PB30 78 aa11.17□□□□□ -0.62
SRPK1-210ENST00000508473 FCGBPQ9Y6R7 5405 aaPredicted RBP11.16□□□□□ -0.62
SRPK1-210ENST00000508473 H0Y9P7 68 aa11.15□□□□□ -0.62
SRPK1-210ENST00000508473 FAM236AA0A1B0GUQ0 79 aa11.12□□□□□ -0.63
SRPK1-210ENST00000508473 FAM236BA0A1B0GV22 79 aa11.12□□□□□ -0.63
SRPK1-210ENST00000508473 ATOX1O00244 68 aa11.08□□□□□ -0.64
SRPK1-210ENST00000508473 KRTAP19-6Q3LI70 58 aa11.06□□□□□ -0.64
SRPK1-210ENST00000508473 KRTAP3-3Q9BYR6 98 aa11.05□□□□□ -0.64
SRPK1-210ENST00000508473 J3QR89 54 aa11□□□□□ -0.65
SRPK1-210ENST00000508473 LINC00208Q96KT6 92 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 169.4 ms