RNA–Protein interactions for RNA: ENST00000506197.2

SMIM20-201, Transcript of small integral membrane protein 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM20, Length 935 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20-201ENST00000506197 C9orf92A6NGG3 77 aa11.09□□□□□ -0.63
SMIM20-201ENST00000506197 NDUFB1O75438 58 aa11.09□□□□□ -0.63
SMIM20-201ENST00000506197 CDIP1Q9H305 208 aa11.08□□□□□ -0.64
SMIM20-201ENST00000506197 A8MWP4 228 aa11.06□□□□□ -0.64
SMIM20-201ENST00000506197 IGHV6-1A0A0B4J1U7 121 aa11.05□□□□□ -0.64
SMIM20-201ENST00000506197 A0A1B0GVX0 72 aa11.05□□□□□ -0.64
SMIM20-201ENST00000506197 DSCR10P59022 87 aa11.02□□□□□ -0.65
SMIM20-201ENST00000506197 K7ERU9 68 aa11.01□□□□□ -0.65
SMIM20-201ENST00000506197 IGKV3D-7A0A0C4DH55 119 aa11□□□□□ -0.65
SMIM20-201ENST00000506197 C8orf87E5RJ46 101 aa11□□□□□ -0.65
SMIM20-201ENST00000506197 LINC00313P59037 77 aa11□□□□□ -0.65
SMIM20-201ENST00000506197 PRR15Q8IV56 129 aa10.98□□□□□ -0.65
SMIM20-201ENST00000506197 A0A0U1RQV1 116 aa10.97□□□□□ -0.65
SMIM20-201ENST00000506197 K7EQZ3 153 aa10.97□□□□□ -0.65
SMIM20-201ENST00000506197 CXCL6P80162 114 aa10.97□□□□□ -0.65
SMIM20-201ENST00000506197 XP32Q5T750 250 aa10.96□□□□□ -0.65
SMIM20-201ENST00000506197 ATP5EP2Q5VTU8 51 aa10.95□□□□□ -0.66
SMIM20-201ENST00000506197 MUC17Q685J3 4493 aa10.95□□□□□ -0.66
SMIM20-201ENST00000506197 Q8N9L7 120 aa10.94□□□□□ -0.66
SMIM20-201ENST00000506197 LINC00643Q86TS7 51 aa10.93□□□□□ -0.66
SMIM20-201ENST00000506197 C8orf17Q9NRJ1 99 aa10.93□□□□□ -0.66
SMIM20-201ENST00000506197 NOTCH2NLQ7Z3S9 236 aa10.92□□□□□ -0.66
SMIM20-201ENST00000506197 MMP24-AS1A0A0U1RRL7 71 aa10.86□□□□□ -0.67
SMIM20-201ENST00000506197 KRTAP16-1A8MUX0 517 aa10.86□□□□□ -0.67
SMIM20-201ENST00000506197 FAT4Q6V0I7 4981 aa10.85□□□□□ -0.67
SMIM20-201ENST00000506197 RPL37P61927 97 aaKnown RBP10.83□□□□□ -0.68
SMIM20-201ENST00000506197 Q75L30 129 aa10.83□□□□□ -0.68
SMIM20-201ENST00000506197 C20orf166-AS1Q96NR2 134 aa10.83□□□□□ -0.68
SMIM20-201ENST00000506197 hDV103S1A0JD37 113 aa10.82□□□□□ -0.68
SMIM20-201ENST00000506197 TMEM254Q8TBM7 123 aa10.82□□□□□ -0.68
SMIM20-201ENST00000506197 A8MUU9 505 aa10.81□□□□□ -0.68
SMIM20-201ENST00000506197 SEC61BP60468 96 aaKnown RBP10.81□□□□□ -0.68
SMIM20-201ENST00000506197 HIST1H4AP62805 103 aaKnown RBP10.81□□□□□ -0.68
SMIM20-201ENST00000506197 WFDC13Q8IUB5 93 aa10.81□□□□□ -0.68
SMIM20-201ENST00000506197 CASC2Q6XLA1 102 aa10.8□□□□□ -0.68
SMIM20-201ENST00000506197 HCG22E2RYF7 251 aa10.79□□□□□ -0.68
SMIM20-201ENST00000506197 MRPL34Q9BQ48 92 aaKnown RBP10.79□□□□□ -0.68
SMIM20-201ENST00000506197 ATP11AUNQ6ZP68 121 aa10.75□□□□□ -0.69
SMIM20-201ENST00000506197 Q8N9P0 234 aaPredicted RBP10.74□□□□□ -0.69
SMIM20-201ENST00000506197 NDUFS5O43920 106 aa10.73□□□□□ -0.69
SMIM20-201ENST00000506197 PCOTHQ58A44 107 aa10.72□□□□□ -0.69
SMIM20-201ENST00000506197 LCE2AQ5TA79 106 aaPredicted RBP10.72□□□□□ -0.69
SMIM20-201ENST00000506197 A0A087WVE0 104 aa10.68□□□□□ -0.7
SMIM20-201ENST00000506197 MT-ATP8P03928 68 aa10.66□□□□□ -0.7
SMIM20-201ENST00000506197 ZCCHC13Q8WW36 166 aaKnown RBP10.63□□□□□ -0.71
SMIM20-201ENST00000506197 IMUPQ9GZP8 106 aa10.63□□□□□ -0.71
SMIM20-201ENST00000506197 KRTAP9-2Q9BYQ4 174 aa10.58□□□□□ -0.72
SMIM20-201ENST00000506197 KRTAP4-1Q9BYQ7 146 aa10.56□□□□□ -0.72
SMIM20-201ENST00000506197 TP53AIP1Q9HCN2 124 aa10.56□□□□□ -0.72
SMIM20-201ENST00000506197 SCGB1A1P11684 91 aa10.49□□□□□ -0.73
SMIM20-201ENST00000506197 Q5W150 140 aa10.48□□□□□ -0.73
SMIM20-201ENST00000506197 FAM236AA0A1B0GUQ0 79 aa10.45□□□□□ -0.74
SMIM20-201ENST00000506197 FAM236BA0A1B0GV22 79 aa10.45□□□□□ -0.74
SMIM20-201ENST00000506197 UQCRQO14949 82 aa10.44□□□□□ -0.74
SMIM20-201ENST00000506197 TRAV22A0A0B4J277 110 aa10.4□□□□□ -0.74
SMIM20-201ENST00000506197 SPINK7P58062 85 aa10.4□□□□□ -0.74
SMIM20-201ENST00000506197 OCR1Q9BZK8 76 aa10.4□□□□□ -0.74
SMIM20-201ENST00000506197 IGKV2D-30A0A075B6S6 120 aa10.38□□□□□ -0.75
SMIM20-201ENST00000506197 IGKV2-30P06310 120 aa10.38□□□□□ -0.75
SMIM20-201ENST00000506197 C7orf65Q6ZTY9 151 aa10.37□□□□□ -0.75
SMIM20-201ENST00000506197 H0Y9P7 68 aa10.35□□□□□ -0.75
SMIM20-201ENST00000506197 SMIM20Q8N5G0 67 aa10.34□□□□□ -0.75
SMIM20-201ENST00000506197 ATOX1O00244 68 aa10.33□□□□□ -0.76
SMIM20-201ENST00000506197 MP68P56378 58 aa10.3□□□□□ -0.76
SMIM20-201ENST00000506197 LCE2CQ5TA81 110 aa10.3□□□□□ -0.76
SMIM20-201ENST00000506197 C5orf47Q569G3 176 aa10.29□□□□□ -0.76
SMIM20-201ENST00000506197 TRAV7A0A075B6U4 112 aa10.28□□□□□ -0.76
SMIM20-201ENST00000506197 LOC101927531A0A1B0GV80 90 aa10.28□□□□□ -0.76
SMIM20-201ENST00000506197 HRES1P13985 223 aa10.28□□□□□ -0.76
SMIM20-201ENST00000506197 KRTAP19-2Q3LHN2 52 aa10.28□□□□□ -0.76
SMIM20-201ENST00000506197 RBM12B-AS1Q9P1G2 102 aa10.26□□□□□ -0.77
SMIM20-201ENST00000506197 KRTAP9-6A0A140TA67 174 aa10.25□□□□□ -0.77
SMIM20-201ENST00000506197 COX6B2Q6YFQ2 88 aa10.23□□□□□ -0.77
SMIM20-201ENST00000506197 C1orf64Q8NEQ6 169 aa10.23□□□□□ -0.77
SMIM20-201ENST00000506197 LINC00208Q96KT6 92 aa10.23□□□□□ -0.77
SMIM20-201ENST00000506197 FAM236DA0A1B0GTK5 79 aa10.21□□□□□ -0.77
SMIM20-201ENST00000506197 FAM236CP0DP71 79 aa10.21□□□□□ -0.77
SMIM20-201ENST00000506197 CYP4F30PQ9H0H9 118 aa10.21□□□□□ -0.77
SMIM20-201ENST00000506197 H3BPC8 53 aa10.2□□□□□ -0.78
SMIM20-201ENST00000506197 MT1HP80294 61 aa10.2□□□□□ -0.78
SMIM20-201ENST00000506197 MPLKIPQ8TAP9 179 aa10.19□□□□□ -0.78
SMIM20-201ENST00000506197 LCE2DQ5TA82 110 aaPredicted RBP10.18□□□□□ -0.78
SMIM20-201ENST00000506197 SERP2Q8N6R1 65 aa10.16□□□□□ -0.78
SMIM20-201ENST00000506197 FLGP20930 4061 aaPredicted RBP10.12□□□□□ -0.79
SMIM20-201ENST00000506197 C4orf26Q17RF5 130 aa10.11□□□□□ -0.79
SMIM20-201ENST00000506197 KLKP1Q107X0 134 aa10.05□□□□□ -0.8
SMIM20-201ENST00000506197 FSIP2Q5CZC0 6907 aa10.05□□□□□ -0.8
SMIM20-201ENST00000506197 ANAPC13Q9BS18 74 aa10.04□□□□□ -0.8
SMIM20-201ENST00000506197 M0R2T5 61 aa10.03□□□□□ -0.8
SMIM20-201ENST00000506197 C20orf197Q8N268 126 aa10.03□□□□□ -0.8
SMIM20-201ENST00000506197 COX7CP15954 63 aa10.02□□□□□ -0.81
SMIM20-201ENST00000506197 LORP23490 312 aaPredicted RBP10.02□□□□□ -0.81
SMIM20-201ENST00000506197 KRTAP10-6P60371 365 aaPredicted RBP10.02□□□□□ -0.81
SMIM20-201ENST00000506197 SNURFQ9Y675 71 aa10□□□□□ -0.81
SMIM20-201ENST00000506197 H1FX-AS1Q4G0G2 97 aa9.97□□□□□ -0.81
SMIM20-201ENST00000506197 CRCT1Q9UGL9 99 aa9.97□□□□□ -0.81
SMIM20-201ENST00000506197 KRTAP3-1Q9BYR8 98 aa9.91□□□□□ -0.82
SMIM20-201ENST00000506197 A8MUN3 132 aa9.87□□□□□ -0.83
SMIM20-201ENST00000506197 S4R3F8 94 aa9.82□□□□□ -0.84
SMIM20-201ENST00000506197 NDUFC1O43677 76 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms