RNA–Protein interactions for RNA: ENST00000504315.1

HOXC6-203, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-203ENST00000504315 A0A1B0GVX0 72 aa6.96□□□□□ -1.3
HOXC6-203ENST00000504315 C8orf87E5RJ46 101 aa6.96□□□□□ -1.3
HOXC6-203ENST00000504315 CRCT1Q9UGL9 99 aa6.96□□□□□ -1.3
HOXC6-203ENST00000504315 TRBV20-1A0A075B6N2 111 aa6.95□□□□□ -1.3
HOXC6-203ENST00000504315 Q6ZQT0 140 aa6.95□□□□□ -1.3
HOXC6-203ENST00000504315 NAA38Q9BRA0 125 aaKnown RBP6.95□□□□□ -1.3
HOXC6-203ENST00000504315 JMJD7-PLA2G4BH0Y9G9 81 aa6.94□□□□□ -1.3
HOXC6-203ENST00000504315 J3KT08 172 aa6.94□□□□□ -1.3
HOXC6-203ENST00000504315 LOC110117498A0A087WWA1 95 aa6.93□□□□□ -1.3
HOXC6-203ENST00000504315 A0A1B0GW54 56 aa6.93□□□□□ -1.3
HOXC6-203ENST00000504315 MPLKIPQ8TAP9 179 aa6.92□□□□□ -1.3
HOXC6-203ENST00000504315 PDE6GP18545 87 aa6.9□□□□□ -1.3
HOXC6-203ENST00000504315 LYRM7Q5U5X0 104 aa6.9□□□□□ -1.3
HOXC6-203ENST00000504315 FSIP2Q5CZC0 6907 aa6.9□□□□□ -1.31
HOXC6-203ENST00000504315 HRES1P13985 223 aa6.89□□□□□ -1.31
HOXC6-203ENST00000504315 TSTD3H0UI37 97 aa6.88□□□□□ -1.31
HOXC6-203ENST00000504315 Q8N9P0 234 aaPredicted RBP6.86□□□□□ -1.31
HOXC6-203ENST00000504315 KRTAP9-8Q9BYQ0 159 aa6.86□□□□□ -1.31
HOXC6-203ENST00000504315 C14orf132Q9NPU4 83 aa6.86□□□□□ -1.31
HOXC6-203ENST00000504315 A8MWP4 228 aa6.85□□□□□ -1.31
HOXC6-203ENST00000504315 NDUFB1O75438 58 aa6.85□□□□□ -1.31
HOXC6-203ENST00000504315 ZCCHC13Q8WW36 166 aaKnown RBP6.85□□□□□ -1.31
HOXC6-203ENST00000504315 RBM12B-AS1Q9P1G2 102 aa6.84□□□□□ -1.31
HOXC6-203ENST00000504315 C8orf17Q9NRJ1 99 aa6.83□□□□□ -1.32
HOXC6-203ENST00000504315 IGKV3D-7A0A0C4DH55 119 aa6.82□□□□□ -1.32
HOXC6-203ENST00000504315 FAM236DA0A1B0GTK5 79 aa6.82□□□□□ -1.32
HOXC6-203ENST00000504315 LOC105371267A0A1B0GV96 52 aa6.82□□□□□ -1.32
HOXC6-203ENST00000504315 FAM236CP0DP71 79 aa6.82□□□□□ -1.32
HOXC6-203ENST00000504315 BATFQ16520 125 aa6.82□□□□□ -1.32
HOXC6-203ENST00000504315 C9orf118A6NHY6 69 aa6.81□□□□□ -1.32
HOXC6-203ENST00000504315 H3BT86 120 aa6.8□□□□□ -1.32
HOXC6-203ENST00000504315 TAX1BP3O14907 124 aa6.8□□□□□ -1.32
HOXC6-203ENST00000504315 PRR15Q8IV56 129 aa6.79□□□□□ -1.32
HOXC6-203ENST00000504315 SPINK7P58062 85 aa6.78□□□□□ -1.32
HOXC6-203ENST00000504315 NREPQ16612 68 aa6.78□□□□□ -1.32
HOXC6-203ENST00000504315 A0A1W2PPM0 123 aa6.77□□□□□ -1.33
HOXC6-203ENST00000504315 Q6ZVQ6 151 aa6.77□□□□□ -1.33
HOXC6-203ENST00000504315 MMP24-AS1A0A0U1RRL7 71 aa6.74□□□□□ -1.33
HOXC6-203ENST00000504315 MT2AP02795 61 aa6.74□□□□□ -1.33
HOXC6-203ENST00000504315 MTURNQ8N3F0 131 aa6.74□□□□□ -1.33
HOXC6-203ENST00000504315 TMEM254Q8TBM7 123 aa6.72□□□□□ -1.33
HOXC6-203ENST00000504315 MRPL34Q9BQ48 92 aaKnown RBP6.71□□□□□ -1.34
HOXC6-203ENST00000504315 K7EQZ3 153 aa6.69□□□□□ -1.34
HOXC6-203ENST00000504315 MT1FP04733 61 aa6.69□□□□□ -1.34
HOXC6-203ENST00000504315 hDV103S1A0JD37 113 aa6.68□□□□□ -1.34
HOXC6-203ENST00000504315 WFDC13Q8IUB5 93 aa6.68□□□□□ -1.34
HOXC6-203ENST00000504315 USH2AO75445 5202 aa6.68□□□□□ -1.34
HOXC6-203ENST00000504315 SPCS1Q9Y6A9 102 aa6.67□□□□□ -1.34
HOXC6-203ENST00000504315 BPY2O14599 106 aa6.65□□□□□ -1.34
HOXC6-203ENST00000504315 KRTAP9-3Q9BYQ3 159 aa6.65□□□□□ -1.34
HOXC6-203ENST00000504315 PRO0461Q9UI25 63 aa6.62□□□□□ -1.35
HOXC6-203ENST00000504315 KRTAP10-10P60014 251 aa6.61□□□□□ -1.35
HOXC6-203ENST00000504315 SSPOA2VEC9 5147 aa6.6□□□□□ -1.35
HOXC6-203ENST00000504315 COL5A1-AS1Q5SY13 56 aa6.6□□□□□ -1.35
HOXC6-203ENST00000504315 NDUFS5O43920 106 aa6.59□□□□□ -1.35
HOXC6-203ENST00000504315 Q5W150 140 aa6.58□□□□□ -1.36
HOXC6-203ENST00000504315 K7EP34 96 aa6.57□□□□□ -1.36
HOXC6-203ENST00000504315 Q8N9L7 120 aa6.57□□□□□ -1.36
HOXC6-203ENST00000504315 CASC2Q6XLA1 102 aa6.56□□□□□ -1.36
HOXC6-203ENST00000504315 C7orf65Q6ZTY9 151 aa6.56□□□□□ -1.36
HOXC6-203ENST00000504315 LINC00846Q9NV44 126 aa6.55□□□□□ -1.36
HOXC6-203ENST00000504315 H1FX-AS1Q4G0G2 97 aa6.54□□□□□ -1.36
HOXC6-203ENST00000504315 HCG22E2RYF7 251 aa6.53□□□□□ -1.36
HOXC6-203ENST00000504315 UBL5Q9BZL1 73 aa6.53□□□□□ -1.36
HOXC6-203ENST00000504315 IGKV2D-30A0A075B6S6 120 aa6.52□□□□□ -1.37
HOXC6-203ENST00000504315 IGKV2-30P06310 120 aa6.52□□□□□ -1.37
HOXC6-203ENST00000504315 CXCL6P80162 114 aa6.51□□□□□ -1.37
HOXC6-203ENST00000504315 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.5□□□□□ -1.37
HOXC6-203ENST00000504315 KRTAP19-1Q8IUB9 90 aa6.48□□□□□ -1.37
HOXC6-203ENST00000504315 GTF2H5Q6ZYL4 71 aa6.47□□□□□ -1.37
HOXC6-203ENST00000504315 FCGBPQ9Y6R7 5405 aaPredicted RBP6.47□□□□□ -1.37
HOXC6-203ENST00000504315 F8W1H4 67 aa6.45□□□□□ -1.38
HOXC6-203ENST00000504315 C4orf26Q17RF5 130 aa6.42□□□□□ -1.38
HOXC6-203ENST00000504315 ETDBQ3ZM63 59 aa6.42□□□□□ -1.38
HOXC6-203ENST00000504315 KRTAP9-7A8MTY7 169 aa6.4□□□□□ -1.38
HOXC6-203ENST00000504315 KRTAP19-6Q3LI70 58 aa6.4□□□□□ -1.38
HOXC6-203ENST00000504315 TP53AIP1Q9HCN2 124 aa6.38□□□□□ -1.39
HOXC6-203ENST00000504315 KRTAP3-1Q9BYR8 98 aa6.37□□□□□ -1.39
HOXC6-203ENST00000504315 PCP4L1A6NKN8 68 aa6.36□□□□□ -1.39
HOXC6-203ENST00000504315 C1orf64Q8NEQ6 169 aa6.31□□□□□ -1.4
HOXC6-203ENST00000504315 S4R3F8 94 aa6.3□□□□□ -1.4
HOXC6-203ENST00000504315 FAM240AA0A1B0GVK7 77 aa6.29□□□□□ -1.4
HOXC6-203ENST00000504315 ACYP1P07311 99 aa6.29□□□□□ -1.4
HOXC6-203ENST00000504315 C5orf47Q569G3 176 aa6.29□□□□□ -1.4
HOXC6-203ENST00000504315 LCA10Q71F78 164 aa6.27□□□□□ -1.41
HOXC6-203ENST00000504315 ATP5EP2Q5VTU8 51 aa6.26□□□□□ -1.41
HOXC6-203ENST00000504315 CYP4F30PQ9H0H9 118 aa6.26□□□□□ -1.41
HOXC6-203ENST00000504315 TRAV22A0A0B4J277 110 aa6.25□□□□□ -1.41
HOXC6-203ENST00000504315 CSAG1Q6PB30 78 aa6.25□□□□□ -1.41
HOXC6-203ENST00000504315 FAM236AA0A1B0GUQ0 79 aa6.21□□□□□ -1.42
HOXC6-203ENST00000504315 FAM236BA0A1B0GV22 79 aa6.21□□□□□ -1.42
HOXC6-203ENST00000504315 LOC101927531A0A1B0GV80 90 aa6.21□□□□□ -1.42
HOXC6-203ENST00000504315 SPRR2GQ9BYE4 73 aa6.19□□□□□ -1.42
HOXC6-203ENST00000504315 UQCRQO14949 82 aa6.17□□□□□ -1.42
HOXC6-203ENST00000504315 MT1BP07438 61 aa6.15□□□□□ -1.42
HOXC6-203ENST00000504315 HIST1H4AP62805 103 aaKnown RBP6.15□□□□□ -1.42
HOXC6-203ENST00000504315 KRTAP19-8Q3LI54 63 aa6.15□□□□□ -1.42
HOXC6-203ENST00000504315 MACF1Q9UPN3 7388 aaKnown RBP6.14□□□□□ -1.43
HOXC6-203ENST00000504315 A0A087WVE0 104 aa6.14□□□□□ -1.43
HOXC6-203ENST00000504315 ATOX1O00244 68 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms