RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 KRTAP19-8Q3LI54 63 aa7.03□□□□□ -1.28
HDAC6-236ENST00000498808 A0A0B4J2C4 111 aa7.01□□□□□ -1.29
HDAC6-236ENST00000498808 HSBP1L1C9JCN9 74 aa7.01□□□□□ -1.29
HDAC6-236ENST00000498808 LYRM7Q5U5X0 104 aa7.01□□□□□ -1.29
HDAC6-236ENST00000498808 IGKV3D-7A0A0C4DH55 119 aa6.98□□□□□ -1.29
HDAC6-236ENST00000498808 SPRR2GQ9BYE4 73 aa6.97□□□□□ -1.29
HDAC6-236ENST00000498808 J3KT08 172 aa6.96□□□□□ -1.3
HDAC6-236ENST00000498808 ORMDL1Q9P0S3 153 aa6.96□□□□□ -1.3
HDAC6-236ENST00000498808 DSCR8Q96T75 97 aa6.95□□□□□ -1.3
HDAC6-236ENST00000498808 VPS25Q9BRG1 176 aa6.95□□□□□ -1.3
HDAC6-236ENST00000498808 C8orf17Q9NRJ1 99 aa6.95□□□□□ -1.3
HDAC6-236ENST00000498808 FAM236AA0A1B0GUQ0 79 aa6.94□□□□□ -1.3
HDAC6-236ENST00000498808 FAM236BA0A1B0GV22 79 aa6.94□□□□□ -1.3
HDAC6-236ENST00000498808 TRIAP1O43715 76 aa6.94□□□□□ -1.3
HDAC6-236ENST00000498808 COX8AP10176 69 aa6.93□□□□□ -1.3
HDAC6-236ENST00000498808 SPRR2EP22531 72 aa6.93□□□□□ -1.3
HDAC6-236ENST00000498808 SPRR2BP35325 72 aa6.93□□□□□ -1.3
HDAC6-236ENST00000498808 SPRR2AP35326 72 aa6.93□□□□□ -1.3
HDAC6-236ENST00000498808 TMEM256-PLSCR3K7ERE1 68 aa6.92□□□□□ -1.3
HDAC6-236ENST00000498808 DNAL4O96015 105 aa6.92□□□□□ -1.3
HDAC6-236ENST00000498808 KRTAP2-2Q9BYT5 123 aa6.92□□□□□ -1.3
HDAC6-236ENST00000498808 KRTAP2-1Q9BYU5 128 aa6.92□□□□□ -1.3
HDAC6-236ENST00000498808 H3BQ85 93 aa6.91□□□□□ -1.3
HDAC6-236ENST00000498808 NDUFB1O75438 58 aa6.91□□□□□ -1.3
HDAC6-236ENST00000498808 DLEU1O43261 78 aa6.89□□□□□ -1.31
HDAC6-236ENST00000498808 Q6ZVQ6 151 aa6.89□□□□□ -1.31
HDAC6-236ENST00000498808 SPRR2FQ96RM1 72 aa6.89□□□□□ -1.31
HDAC6-236ENST00000498808 HIST1H2BLQ99880 126 aa6.89□□□□□ -1.31
HDAC6-236ENST00000498808 PRO1854Q9UHT4 67 aa6.89□□□□□ -1.31
HDAC6-236ENST00000498808 UBE2V1Q13404 147 aa6.87□□□□□ -1.31
HDAC6-236ENST00000498808 C5orf47Q569G3 176 aa6.87□□□□□ -1.31
HDAC6-236ENST00000498808 HIST3H2BBQ8N257 126 aa6.86□□□□□ -1.31
HDAC6-236ENST00000498808 Q6ZQT0 140 aa6.85□□□□□ -1.31
HDAC6-236ENST00000498808 HIGD1BQ9P298 99 aa6.85□□□□□ -1.31
HDAC6-236ENST00000498808 RBM3P98179 157 aaKnown RBP6.83□□□□□ -1.32
HDAC6-236ENST00000498808 C2orf91Q6ZV80 131 aa6.83□□□□□ -1.32
HDAC6-236ENST00000498808 IGKV2D-30A0A075B6S6 120 aa6.82□□□□□ -1.32
HDAC6-236ENST00000498808 IGKV2-30P06310 120 aa6.82□□□□□ -1.32
HDAC6-236ENST00000498808 C14orf144Q96I85 54 aa6.82□□□□□ -1.32
HDAC6-236ENST00000498808 S100A2P29034 98 aa6.81□□□□□ -1.32
HDAC6-236ENST00000498808 C21orf62-AS1Q17RA5 79 aa6.81□□□□□ -1.32
HDAC6-236ENST00000498808 CEND1Q8N111 149 aa6.81□□□□□ -1.32
HDAC6-236ENST00000498808 S100A6P06703 90 aa6.8□□□□□ -1.32
HDAC6-236ENST00000498808 FXYD2P54710 66 aa6.8□□□□□ -1.32
HDAC6-236ENST00000498808 IMUPQ9GZP8 106 aa6.8□□□□□ -1.32
HDAC6-236ENST00000498808 MRPL34Q9BQ48 92 aaKnown RBP6.79□□□□□ -1.32
HDAC6-236ENST00000498808 TMEM238LA0A1B0GVL6 79 aa6.78□□□□□ -1.32
HDAC6-236ENST00000498808 A6NJY4 79 aa6.78□□□□□ -1.32
HDAC6-236ENST00000498808 LCE1AQ5T7P2 110 aa6.78□□□□□ -1.32
HDAC6-236ENST00000498808 C7orf65Q6ZTY9 151 aa6.78□□□□□ -1.32
HDAC6-236ENST00000498808 TMEM254Q8TBM7 123 aa6.78□□□□□ -1.32
HDAC6-236ENST00000498808 MMP24-AS1A0A0U1RRL7 71 aa6.77□□□□□ -1.33
HDAC6-236ENST00000498808 C4orf26Q17RF5 130 aa6.77□□□□□ -1.33
HDAC6-236ENST00000498808 PRR15Q8IV56 129 aa6.77□□□□□ -1.33
HDAC6-236ENST00000498808 PSMB2P49721 201 aa6.76□□□□□ -1.33
HDAC6-236ENST00000498808 SMCPP49901 116 aaPredicted RBP6.76□□□□□ -1.33
HDAC6-236ENST00000498808 TMA7Q9Y2S6 64 aaKnown RBP6.76□□□□□ -1.33
HDAC6-236ENST00000498808 C9JAW5 83 aa6.75□□□□□ -1.33
HDAC6-236ENST00000498808 KLKP1Q107X0 134 aa6.75□□□□□ -1.33
HDAC6-236ENST00000498808 Q5W150 140 aa6.74□□□□□ -1.33
HDAC6-236ENST00000498808 NDUFS5O43920 106 aa6.73□□□□□ -1.33
HDAC6-236ENST00000498808 CSAG1Q6PB30 78 aa6.72□□□□□ -1.33
HDAC6-236ENST00000498808 K7ERJ3 54 aa6.71□□□□□ -1.34
HDAC6-236ENST00000498808 COX6CP09669 75 aa6.71□□□□□ -1.34
HDAC6-236ENST00000498808 SPRR2DP22532 72 aa6.7□□□□□ -1.34
HDAC6-236ENST00000498808 KRTAP3-1Q9BYR8 98 aa6.7□□□□□ -1.34
HDAC6-236ENST00000498808 PAM16Q9Y3D7 125 aa6.7□□□□□ -1.34
HDAC6-236ENST00000498808 S4R3F8 94 aa6.7□□□□□ -1.34
HDAC6-236ENST00000498808 hDV103S1A0JD37 113 aa6.69□□□□□ -1.34
HDAC6-236ENST00000498808 SPATA45Q537H7 98 aa6.69□□□□□ -1.34
HDAC6-236ENST00000498808 LCA10Q71F78 164 aa6.67□□□□□ -1.34
HDAC6-236ENST00000498808 KRTAP8-1Q8IUC2 63 aa6.67□□□□□ -1.34
HDAC6-236ENST00000498808 GPR98Q8WXG9 6306 aa6.64□□□□□ -1.35
HDAC6-236ENST00000498808 A0A1B0GW54 56 aa6.64□□□□□ -1.35
HDAC6-236ENST00000498808 BAALC-AS2P0C853 105 aa6.64□□□□□ -1.35
HDAC6-236ENST00000498808 K7EQZ3 153 aa6.62□□□□□ -1.35
HDAC6-236ENST00000498808 LOC110117498A0A087WWA1 95 aa6.6□□□□□ -1.35
HDAC6-236ENST00000498808 VAMP8Q9BV40 100 aa6.59□□□□□ -1.35
HDAC6-236ENST00000498808 NREPQ16612 68 aa6.58□□□□□ -1.36
HDAC6-236ENST00000498808 LCE3BQ5TA77 95 aa6.58□□□□□ -1.36
HDAC6-236ENST00000498808 CRIPTQ9P021 101 aa6.58□□□□□ -1.36
HDAC6-236ENST00000498808 LOC105371267A0A1B0GV96 52 aa6.57□□□□□ -1.36
HDAC6-236ENST00000498808 HSD52Q0P140 79 aa6.57□□□□□ -1.36
HDAC6-236ENST00000498808 SCGB1C2P0DMR2 95 aa6.56□□□□□ -1.36
HDAC6-236ENST00000498808 MT1XP80297 61 aa6.56□□□□□ -1.36
HDAC6-236ENST00000498808 JMJD7-PLA2G4BH0Y9G9 81 aa6.55□□□□□ -1.36
HDAC6-236ENST00000498808 C1orf64Q8NEQ6 169 aa6.55□□□□□ -1.36
HDAC6-236ENST00000498808 KRTAP3-3Q9BYR6 98 aa6.55□□□□□ -1.36
HDAC6-236ENST00000498808 SMIM6P0DI80 62 aa6.53□□□□□ -1.36
HDAC6-236ENST00000498808 PDE6GP18545 87 aa6.53□□□□□ -1.36
HDAC6-236ENST00000498808 C14orf132Q9NPU4 83 aa6.53□□□□□ -1.36
HDAC6-236ENST00000498808 PRO2289Q9P1D8 64 aa6.53□□□□□ -1.36
HDAC6-236ENST00000498808 HCG22E2RYF7 251 aa6.52□□□□□ -1.37
HDAC6-236ENST00000498808 KRTAP12-2P59991 146 aa6.5□□□□□ -1.37
HDAC6-236ENST00000498808 KRTAP4-8A0A0G2JLE6 195 aa6.49□□□□□ -1.37
HDAC6-236ENST00000498808 KRTAP4-8Q9BYQ9 185 aa6.49□□□□□ -1.37
HDAC6-236ENST00000498808 PYY3Q5JQD4 70 aa6.48□□□□□ -1.37
HDAC6-236ENST00000498808 CXCL6P80162 114 aa6.46□□□□□ -1.38
HDAC6-236ENST00000498808 CASC2Q6XLA1 102 aa6.46□□□□□ -1.38
HDAC6-236ENST00000498808 ATXN8Q156A1 80 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms