RNA–Protein interactions for RNA: ENST00000498034.5

LMBR1-219, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-219ENST00000498034 MT2AP02795 61 aa10.12□□□□□ -0.79
LMBR1-219ENST00000498034 TMA7Q9Y2S6 64 aaKnown RBP10.12□□□□□ -0.79
LMBR1-219ENST00000498034 BAALC-AS2P0C853 105 aa10.11□□□□□ -0.79
LMBR1-219ENST00000498034 C9JAW5 83 aa10.07□□□□□ -0.8
LMBR1-219ENST00000498034 J3KT08 172 aa10.05□□□□□ -0.8
LMBR1-219ENST00000498034 MT1FP04733 61 aa10.04□□□□□ -0.8
LMBR1-219ENST00000498034 Q6ZQT0 140 aa10.04□□□□□ -0.8
LMBR1-219ENST00000498034 ZCCHC13Q8WW36 166 aaKnown RBP10.04□□□□□ -0.8
LMBR1-219ENST00000498034 USH2AO75445 5202 aa10.04□□□□□ -0.8
LMBR1-219ENST00000498034 C21orf62-AS1Q17RA5 79 aa10.02□□□□□ -0.81
LMBR1-219ENST00000498034 NAA38Q9BRA0 125 aaKnown RBP10□□□□□ -0.81
LMBR1-219ENST00000498034 SSPOA2VEC9 5147 aa9.99□□□□□ -0.81
LMBR1-219ENST00000498034 SPINK7P58062 85 aa9.99□□□□□ -0.81
LMBR1-219ENST00000498034 NDUFB1O75438 58 aa9.98□□□□□ -0.81
LMBR1-219ENST00000498034 KRTAP10-10P60014 251 aa9.98□□□□□ -0.81
LMBR1-219ENST00000498034 MTURNQ8N3F0 131 aa9.98□□□□□ -0.81
LMBR1-219ENST00000498034 Q8N9P0 234 aaPredicted RBP9.98□□□□□ -0.81
LMBR1-219ENST00000498034 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.97□□□□□ -0.81
LMBR1-219ENST00000498034 LCE2BO14633 110 aa9.97□□□□□ -0.81
LMBR1-219ENST00000498034 ATXN8Q156A1 80 aa9.97□□□□□ -0.81
LMBR1-219ENST00000498034 KRTAP9-3Q9BYQ3 159 aa9.96□□□□□ -0.82
LMBR1-219ENST00000498034 JMJD7-PLA2G4BH0Y9G9 81 aa9.95□□□□□ -0.82
LMBR1-219ENST00000498034 C8orf17Q9NRJ1 99 aa9.95□□□□□ -0.82
LMBR1-219ENST00000498034 LOC110117498A0A087WWA1 95 aa9.93□□□□□ -0.82
LMBR1-219ENST00000498034 A8MWP4 228 aa9.93□□□□□ -0.82
LMBR1-219ENST00000498034 M0R143 59 aa9.92□□□□□ -0.82
LMBR1-219ENST00000498034 IGKV3D-7A0A0C4DH55 119 aa9.91□□□□□ -0.82
LMBR1-219ENST00000498034 A0A1B0GW54 56 aa9.9□□□□□ -0.82
LMBR1-219ENST00000498034 KRTAP9-7A8MTY7 169 aa9.9□□□□□ -0.82
LMBR1-219ENST00000498034 LYRM7Q5U5X0 104 aa9.9□□□□□ -0.82
LMBR1-219ENST00000498034 C14orf132Q9NPU4 83 aa9.9□□□□□ -0.82
LMBR1-219ENST00000498034 PDE6GP18545 87 aa9.87□□□□□ -0.83
LMBR1-219ENST00000498034 Q6ZVQ6 151 aa9.86□□□□□ -0.83
LMBR1-219ENST00000498034 WFDC13Q8IUB5 93 aa9.86□□□□□ -0.83
LMBR1-219ENST00000498034 KRTAP19-1Q8IUB9 90 aa9.86□□□□□ -0.83
LMBR1-219ENST00000498034 PRR15Q8IV56 129 aa9.83□□□□□ -0.84
LMBR1-219ENST00000498034 NREPQ16612 68 aa9.82□□□□□ -0.84
LMBR1-219ENST00000498034 MMP24-AS1A0A0U1RRL7 71 aa9.78□□□□□ -0.84
LMBR1-219ENST00000498034 FCGBPQ9Y6R7 5405 aaPredicted RBP9.77□□□□□ -0.85
LMBR1-219ENST00000498034 MRPL34Q9BQ48 92 aaKnown RBP9.77□□□□□ -0.85
LMBR1-219ENST00000498034 TMEM254Q8TBM7 123 aa9.76□□□□□ -0.85
LMBR1-219ENST00000498034 BATFQ16520 125 aa9.73□□□□□ -0.85
LMBR1-219ENST00000498034 K7EQZ3 153 aa9.72□□□□□ -0.85
LMBR1-219ENST00000498034 SMIM6P0DI80 62 aa9.72□□□□□ -0.85
LMBR1-219ENST00000498034 hDV103S1A0JD37 113 aa9.7□□□□□ -0.86
LMBR1-219ENST00000498034 NDUFS5O43920 106 aa9.69□□□□□ -0.86
LMBR1-219ENST00000498034 H3BT86 120 aa9.66□□□□□ -0.86
LMBR1-219ENST00000498034 TSTD3H0UI37 97 aa9.65□□□□□ -0.86
LMBR1-219ENST00000498034 H1FX-AS1Q4G0G2 97 aa9.65□□□□□ -0.86
LMBR1-219ENST00000498034 C9orf118A6NHY6 69 aa9.64□□□□□ -0.87
LMBR1-219ENST00000498034 BPY2O14599 106 aa9.62□□□□□ -0.87
LMBR1-219ENST00000498034 KRTAP19-6Q3LI70 58 aa9.62□□□□□ -0.87
LMBR1-219ENST00000498034 IGKV2D-30A0A075B6S6 120 aa9.61□□□□□ -0.87
LMBR1-219ENST00000498034 IGKV2-30P06310 120 aa9.61□□□□□ -0.87
LMBR1-219ENST00000498034 Q5W150 140 aa9.61□□□□□ -0.87
LMBR1-219ENST00000498034 TAX1BP3O14907 124 aa9.6□□□□□ -0.87
LMBR1-219ENST00000498034 A0A1W2PPM0 123 aa9.59□□□□□ -0.87
LMBR1-219ENST00000498034 LINC00846Q9NV44 126 aa9.59□□□□□ -0.87
LMBR1-219ENST00000498034 C7orf65Q6ZTY9 151 aa9.56□□□□□ -0.88
LMBR1-219ENST00000498034 Q8N9L7 120 aa9.56□□□□□ -0.88
LMBR1-219ENST00000498034 CASC2Q6XLA1 102 aa9.52□□□□□ -0.89
LMBR1-219ENST00000498034 HCG22E2RYF7 251 aa9.51□□□□□ -0.89
LMBR1-219ENST00000498034 MACF1Q9UPN3 7388 aaKnown RBP9.48□□□□□ -0.89
LMBR1-219ENST00000498034 C4orf26Q17RF5 130 aa9.46□□□□□ -0.9
LMBR1-219ENST00000498034 SPCS1Q9Y6A9 102 aa9.46□□□□□ -0.9
LMBR1-219ENST00000498034 SMCPP49901 116 aaPredicted RBP9.45□□□□□ -0.9
LMBR1-219ENST00000498034 LOC105371267A0A1B0GV96 52 aa9.43□□□□□ -0.9
LMBR1-219ENST00000498034 CXCL6P80162 114 aa9.41□□□□□ -0.9
LMBR1-219ENST00000498034 C5orf47Q569G3 176 aa9.35□□□□□ -0.91
LMBR1-219ENST00000498034 UBL5Q9BZL1 73 aa9.35□□□□□ -0.91
LMBR1-219ENST00000498034 SYNE2Q8WXH0 6885 aaKnown RBP9.35□□□□□ -0.91
LMBR1-219ENST00000498034 KRTAP3-1Q9BYR8 98 aa9.33□□□□□ -0.92
LMBR1-219ENST00000498034 PRO0461Q9UI25 63 aa9.33□□□□□ -0.92
LMBR1-219ENST00000498034 FAM236AA0A1B0GUQ0 79 aa9.27□□□□□ -0.93
LMBR1-219ENST00000498034 FAM236BA0A1B0GV22 79 aa9.27□□□□□ -0.93
LMBR1-219ENST00000498034 S4R3F8 94 aa9.27□□□□□ -0.93
LMBR1-219ENST00000498034 C1orf64Q8NEQ6 169 aa9.26□□□□□ -0.93
LMBR1-219ENST00000498034 K7EP34 96 aa9.25□□□□□ -0.93
LMBR1-219ENST00000498034 KRTAP6-3Q3LI67 103 aa9.25□□□□□ -0.93
LMBR1-219ENST00000498034 COL5A1-AS1Q5SY13 56 aa9.25□□□□□ -0.93
LMBR1-219ENST00000498034 LCA10Q71F78 164 aa9.22□□□□□ -0.93
LMBR1-219ENST00000498034 CSAG1Q6PB30 78 aa9.21□□□□□ -0.94
LMBR1-219ENST00000498034 MT1BP07438 61 aa9.18□□□□□ -0.94
LMBR1-219ENST00000498034 TP53AIP1Q9HCN2 124 aa9.18□□□□□ -0.94
LMBR1-219ENST00000498034 Q5VV11 94 aa9.13□□□□□ -0.95
LMBR1-219ENST00000498034 SPRR2GQ9BYE4 73 aa9.13□□□□□ -0.95
LMBR1-219ENST00000498034 A6NN06 94 aa9.12□□□□□ -0.95
LMBR1-219ENST00000498034 KRTAP19-8Q3LI54 63 aa9.11□□□□□ -0.95
LMBR1-219ENST00000498034 ETDBQ3ZM63 59 aa9.08□□□□□ -0.96
LMBR1-219ENST00000498034 GTF2H5Q6ZYL4 71 aa9.08□□□□□ -0.96
LMBR1-219ENST00000498034 KRTAP3-3Q9BYR6 98 aa9.08□□□□□ -0.96
LMBR1-219ENST00000498034 F8W1H4 67 aa9.06□□□□□ -0.96
LMBR1-219ENST00000498034 KLKP1Q107X0 134 aa9.06□□□□□ -0.96
LMBR1-219ENST00000498034 CYP4F30PQ9H0H9 118 aa9.06□□□□□ -0.96
LMBR1-219ENST00000498034 A0A087WVE0 104 aa9.02□□□□□ -0.97
LMBR1-219ENST00000498034 TRAV22A0A0B4J277 110 aa8.98□□□□□ -0.97
LMBR1-219ENST00000498034 KRTAP10-5P60370 271 aa8.98□□□□□ -0.97
LMBR1-219ENST00000498034 LOC101927531A0A1B0GV80 90 aa8.95□□□□□ -0.98
LMBR1-219ENST00000498034 PCP4L1A6NKN8 68 aa8.91□□□□□ -0.98
LMBR1-219ENST00000498034 CRIPTQ9P021 101 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms