RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 SFTA3P0C7M3 94 aa0.8□□□□□ -2.28
CKS1BP2-201ENST00000497342 SSBP1Q04837 148 aaKnown RBP0.8□□□□□ -2.28
CKS1BP2-201ENST00000497342 ZNF56Q15929 161 aa0.8□□□□□ -2.28
CKS1BP2-201ENST00000497342 PIGYQ3MUY2 71 aa0.8□□□□□ -2.28
CKS1BP2-201ENST00000497342 LINC01590Q5TEZ4 76 aa0.8□□□□□ -2.28
CKS1BP2-201ENST00000497342 Q5VV11 94 aa0.8□□□□□ -2.28
CKS1BP2-201ENST00000497342 Q6ZQY7 126 aa0.8□□□□□ -2.28
CKS1BP2-201ENST00000497342 Q86TA4 180 aa0.8□□□□□ -2.28
CKS1BP2-201ENST00000497342 LINC00208Q96KT6 92 aa0.8□□□□□ -2.28
CKS1BP2-201ENST00000497342 TRAV13-2A0A0B4J235 113 aa0.79□□□□□ -2.28
CKS1BP2-201ENST00000497342 I3L2K1 104 aa0.79□□□□□ -2.28
CKS1BP2-201ENST00000497342 SNAPC5O75971 98 aa0.79□□□□□ -2.28
CKS1BP2-201ENST00000497342 ANGP03950 147 aaKnown RBP0.79□□□□□ -2.28
CKS1BP2-201ENST00000497342 ELOF1P60002 83 aaKnown RBP0.79□□□□□ -2.28
CKS1BP2-201ENST00000497342 GTF2H5Q6ZYL4 71 aa0.79□□□□□ -2.28
CKS1BP2-201ENST00000497342 PPP1R1CQ8WVI7 109 aa0.79□□□□□ -2.28
CKS1BP2-201ENST00000497342 BET1LQ9NYM9 111 aa0.79□□□□□ -2.28
CKS1BP2-201ENST00000497342 FAM24AA6NFZ4 105 aa0.78□□□□□ -2.28
CKS1BP2-201ENST00000497342 M0R143 59 aa0.78□□□□□ -2.28
CKS1BP2-201ENST00000497342 PKIAP61925 76 aa0.78□□□□□ -2.28
CKS1BP2-201ENST00000497342 RPL37P61927 97 aaKnown RBP0.78□□□□□ -2.28
CKS1BP2-201ENST00000497342 WT1-ASQ06250 92 aa0.78□□□□□ -2.28
CKS1BP2-201ENST00000497342 HMGN3Q15651 99 aa0.78□□□□□ -2.28
CKS1BP2-201ENST00000497342 KRTAP19-8Q3LI54 63 aa0.78□□□□□ -2.28
CKS1BP2-201ENST00000497342 CYP2G1PQ6ZSU1 146 aa0.78□□□□□ -2.28
CKS1BP2-201ENST00000497342 SVBPQ8N300 66 aa0.78□□□□□ -2.28
CKS1BP2-201ENST00000497342 A0A087WWC5 75 aa0.77□□□□□ -2.29
CKS1BP2-201ENST00000497342 RBAKDNA6NC62 111 aa0.77□□□□□ -2.29
CKS1BP2-201ENST00000497342 MPC2O95563 127 aa0.77□□□□□ -2.29
CKS1BP2-201ENST00000497342 UBE2D3P61077 147 aa0.77□□□□□ -2.29
CKS1BP2-201ENST00000497342 SNRPGP62308 76 aaKnown RBP0.77□□□□□ -2.29
CKS1BP2-201ENST00000497342 COX7B2Q8TF08 81 aa0.77□□□□□ -2.29
CKS1BP2-201ENST00000497342 FAM167A-AS1Q96KT0 104 aa0.77□□□□□ -2.29
CKS1BP2-201ENST00000497342 Q96NJ1 140 aa0.77□□□□□ -2.29
CKS1BP2-201ENST00000497342 SNHG12Q9BXW3 62 aa0.77□□□□□ -2.29
CKS1BP2-201ENST00000497342 KRTAP4-4Q9BYR3 166 aa0.77□□□□□ -2.29
CKS1BP2-201ENST00000497342 TRBV30A0A0K0K1B3 111 aa0.76□□□□□ -2.29
CKS1BP2-201ENST00000497342 C9orf92A6NGG3 77 aa0.76□□□□□ -2.29
CKS1BP2-201ENST00000497342 NCR3O14931 201 aa0.76□□□□□ -2.29
CKS1BP2-201ENST00000497342 RPL7L1Q6DKI1 246 aaKnown RBP0.76□□□□□ -2.29
CKS1BP2-201ENST00000497342 C20orf197Q8N268 126 aa0.76□□□□□ -2.29
CKS1BP2-201ENST00000497342 TTTY10Q9BZA0 68 aa0.76□□□□□ -2.29
CKS1BP2-201ENST00000497342 ABRACLQ9P1F3 81 aa0.76□□□□□ -2.29
CKS1BP2-201ENST00000497342 LENEPQ9Y5L5 61 aa0.76□□□□□ -2.29
CKS1BP2-201ENST00000497342 TRBV7-3A0A075B6L6 115 aa0.75□□□□□ -2.29
CKS1BP2-201ENST00000497342 SPINK1P00995 79 aa0.75□□□□□ -2.29
CKS1BP2-201ENST00000497342 TRAPPC2P0DI81 140 aa0.75□□□□□ -2.29
CKS1BP2-201ENST00000497342 TRAPPC2BP0DI82 140 aa0.75□□□□□ -2.29
CKS1BP2-201ENST00000497342 SPTSSBQ8NFR3 76 aa0.75□□□□□ -2.29
CKS1BP2-201ENST00000497342 AMELXQ99217 191 aa0.75□□□□□ -2.29
CKS1BP2-201ENST00000497342 CDC42SE2Q9NRR3 84 aa0.75□□□□□ -2.29
CKS1BP2-201ENST00000497342 R4GMQ9 66 aa0.75□□□□□ -2.29
CKS1BP2-201ENST00000497342 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.74□□□□□ -2.29
CKS1BP2-201ENST00000497342 A0A1W2PPM0 123 aa0.74□□□□□ -2.29
CKS1BP2-201ENST00000497342 PHGR1C9JFL3 82 aa0.74□□□□□ -2.29
CKS1BP2-201ENST00000497342 UBE2D2P62837 147 aa0.74□□□□□ -2.29
CKS1BP2-201ENST00000497342 COL5A1-AS1Q5SY13 56 aa0.74□□□□□ -2.29
CKS1BP2-201ENST00000497342 S100A7L2Q5SY68 101 aa0.74□□□□□ -2.29
CKS1BP2-201ENST00000497342 FAM74A4Q5TZK3 123 aa0.74□□□□□ -2.29
CKS1BP2-201ENST00000497342 PLAC4Q8WY50 150 aa0.74□□□□□ -2.29
CKS1BP2-201ENST00000497342 NDUFA4L2Q9NRX3 87 aa0.74□□□□□ -2.29
CKS1BP2-201ENST00000497342 FXYD6-FXYD2A0A087WZ82 144 aa0.73□□□□□ -2.29
CKS1BP2-201ENST00000497342 GVQW2A0A096LPI5 108 aaPredicted RBP0.73□□□□□ -2.29
CKS1BP2-201ENST00000497342 RPS29P62273 56 aaKnown RBP0.73□□□□□ -2.29
CKS1BP2-201ENST00000497342 MGST2Q99735 147 aa0.73□□□□□ -2.29
CKS1BP2-201ENST00000497342 KRTAP4-3Q9BYR4 195 aa0.73□□□□□ -2.29
CKS1BP2-201ENST00000497342 V9GYV3 84 aa0.73□□□□□ -2.29
CKS1BP2-201ENST00000497342 MT-ATP8P03928 68 aa0.72□□□□□ -2.29
CKS1BP2-201ENST00000497342 CLPSL2Q6UWE3 100 aa0.72□□□□□ -2.29
CKS1BP2-201ENST00000497342 TRAV22A0A0B4J277 110 aa0.71□□□□□ -2.3
CKS1BP2-201ENST00000497342 TRBV7-7A0A0K0K1E9 115 aa0.71□□□□□ -2.3
CKS1BP2-201ENST00000497342 NAP1L6A6NFF2 107 aa0.71□□□□□ -2.3
CKS1BP2-201ENST00000497342 IGLC1P0CG04 106 aa0.71□□□□□ -2.3
CKS1BP2-201ENST00000497342 GNG2P59768 71 aa0.71□□□□□ -2.3
CKS1BP2-201ENST00000497342 S100A10P60903 97 aa0.71□□□□□ -2.3
CKS1BP2-201ENST00000497342 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.71□□□□□ -2.3
CKS1BP2-201ENST00000497342 KRTAP19-3Q7Z4W3 81 aa0.71□□□□□ -2.3
CKS1BP2-201ENST00000497342 SPRR2GQ9BYE4 73 aa0.71□□□□□ -2.3
CKS1BP2-201ENST00000497342 CMC2Q9NRP2 79 aa0.71□□□□□ -2.3
CKS1BP2-201ENST00000497342 NDUFC1O43677 76 aa0.7□□□□□ -2.3
CKS1BP2-201ENST00000497342 KRTDAPP60985 99 aa0.7□□□□□ -2.3
CKS1BP2-201ENST00000497342 SCP2D1Q9UJQ7 156 aa0.7□□□□□ -2.3
CKS1BP2-201ENST00000497342 hADV29S1A0JD25 119 aa0.69□□□□□ -2.3
CKS1BP2-201ENST00000497342 FXYD1O00168 92 aa0.69□□□□□ -2.3
CKS1BP2-201ENST00000497342 BCE1O60756 84 aa0.69□□□□□ -2.3
CKS1BP2-201ENST00000497342 MT1XP80297 61 aa0.69□□□□□ -2.3
CKS1BP2-201ENST00000497342 CFAP126Q5VTH2 177 aa0.69□□□□□ -2.3
CKS1BP2-201ENST00000497342 BAGE3Q86Y29 109 aa0.69□□□□□ -2.3
CKS1BP2-201ENST00000497342 SPRR4Q96PI1 79 aa0.69□□□□□ -2.3
CKS1BP2-201ENST00000497342 S100A13Q99584 98 aa0.69□□□□□ -2.3
CKS1BP2-201ENST00000497342 AP4S1Q9Y587 144 aa0.69□□□□□ -2.3
CKS1BP2-201ENST00000497342 LINC01558Q9Y6Z2 57 aa0.69□□□□□ -2.3
CKS1BP2-201ENST00000497342 CRYM-AS1A6NIL9 109 aa0.68□□□□□ -2.3
CKS1BP2-201ENST00000497342 H7BZZ5 65 aa0.68□□□□□ -2.3
CKS1BP2-201ENST00000497342 C6orf201Q7Z4U5 140 aa0.68□□□□□ -2.3
CKS1BP2-201ENST00000497342 FAM213BQ8TBF2 198 aa0.68□□□□□ -2.3
CKS1BP2-201ENST00000497342 SMIM11BQ8TCY0 68 aa0.68□□□□□ -2.3
CKS1BP2-201ENST00000497342 ARHGAP5-AS1Q96IT6 56 aa0.68□□□□□ -2.3
CKS1BP2-201ENST00000497342 TRGV9Q99603 122 aa0.68□□□□□ -2.3
CKS1BP2-201ENST00000497342 LINC00472Q9H8W2 130 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms