RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 NAA38Q9BRA0 125 aaKnown RBP8.49□□□□□ -1.05
TRAPPC3-207ENST00000497251 LOC105371267A0A1B0GV96 52 aa8.48□□□□□ -1.05
TRAPPC3-207ENST00000497251 RBM12B-AS1Q9P1G2 102 aa8.48□□□□□ -1.05
TRAPPC3-207ENST00000497251 SSPOA2VEC9 5147 aa8.48□□□□□ -1.05
TRAPPC3-207ENST00000497251 FAM236DA0A1B0GTK5 79 aa8.47□□□□□ -1.05
TRAPPC3-207ENST00000497251 C9JAW5 83 aa8.47□□□□□ -1.05
TRAPPC3-207ENST00000497251 FAM236CP0DP71 79 aa8.47□□□□□ -1.05
TRAPPC3-207ENST00000497251 VPS25Q9BRG1 176 aa8.47□□□□□ -1.05
TRAPPC3-207ENST00000497251 JMJD7-PLA2G4BH0Y9G9 81 aa8.46□□□□□ -1.06
TRAPPC3-207ENST00000497251 DSCR10P59022 87 aa8.46□□□□□ -1.06
TRAPPC3-207ENST00000497251 MT2AP02795 61 aa8.43□□□□□ -1.06
TRAPPC3-207ENST00000497251 BATFQ16520 125 aa8.43□□□□□ -1.06
TRAPPC3-207ENST00000497251 MPLKIPQ8TAP9 179 aa8.43□□□□□ -1.06
TRAPPC3-207ENST00000497251 A0A1B0GW54 56 aa8.42□□□□□ -1.06
TRAPPC3-207ENST00000497251 DEFB116Q30KQ4 102 aa8.42□□□□□ -1.06
TRAPPC3-207ENST00000497251 LOC110117498A0A087WWA1 95 aa8.41□□□□□ -1.06
TRAPPC3-207ENST00000497251 PDE6GP18545 87 aa8.41□□□□□ -1.06
TRAPPC3-207ENST00000497251 KRTAP16-1A8MUX0 517 aa8.4□□□□□ -1.06
TRAPPC3-207ENST00000497251 Q6ZQT0 140 aa8.4□□□□□ -1.06
TRAPPC3-207ENST00000497251 FCGBPQ9Y6R7 5405 aaPredicted RBP8.39□□□□□ -1.07
TRAPPC3-207ENST00000497251 J3KT08 172 aa8.39□□□□□ -1.07
TRAPPC3-207ENST00000497251 MTURNQ8N3F0 131 aa8.39□□□□□ -1.07
TRAPPC3-207ENST00000497251 IGHV6-1A0A0B4J1U7 121 aa8.38□□□□□ -1.07
TRAPPC3-207ENST00000497251 C9orf118A6NHY6 69 aa8.37□□□□□ -1.07
TRAPPC3-207ENST00000497251 C8orf87E5RJ46 101 aa8.37□□□□□ -1.07
TRAPPC3-207ENST00000497251 HRES1P13985 223 aa8.37□□□□□ -1.07
TRAPPC3-207ENST00000497251 NOTCH2NLQ7Z3S9 236 aa8.37□□□□□ -1.07
TRAPPC3-207ENST00000497251 A0A1B0GVX0 72 aa8.36□□□□□ -1.07
TRAPPC3-207ENST00000497251 KRTAP10-10P60014 251 aa8.36□□□□□ -1.07
TRAPPC3-207ENST00000497251 KRTAP9-3Q9BYQ3 159 aa8.36□□□□□ -1.07
TRAPPC3-207ENST00000497251 LINC00846Q9NV44 126 aa8.36□□□□□ -1.07
TRAPPC3-207ENST00000497251 LCE2BO14633 110 aa8.34□□□□□ -1.07
TRAPPC3-207ENST00000497251 TAX1BP3O14907 124 aa8.34□□□□□ -1.07
TRAPPC3-207ENST00000497251 MT1FP04733 61 aa8.34□□□□□ -1.07
TRAPPC3-207ENST00000497251 C14orf132Q9NPU4 83 aa8.34□□□□□ -1.07
TRAPPC3-207ENST00000497251 A0A1W2PPM0 123 aa8.33□□□□□ -1.08
TRAPPC3-207ENST00000497251 KRTAP19-1Q8IUB9 90 aa8.33□□□□□ -1.08
TRAPPC3-207ENST00000497251 H3BT86 120 aa8.32□□□□□ -1.08
TRAPPC3-207ENST00000497251 NDUFB1O75438 58 aa8.3□□□□□ -1.08
TRAPPC3-207ENST00000497251 A8MWP4 228 aa8.27□□□□□ -1.09
TRAPPC3-207ENST00000497251 NREPQ16612 68 aa8.24□□□□□ -1.09
TRAPPC3-207ENST00000497251 MACF1Q9UPN3 7388 aaKnown RBP8.24□□□□□ -1.09
TRAPPC3-207ENST00000497251 ZCCHC13Q8WW36 166 aaKnown RBP8.23□□□□□ -1.09
TRAPPC3-207ENST00000497251 Q8N9P0 234 aaPredicted RBP8.22□□□□□ -1.09
TRAPPC3-207ENST00000497251 C8orf17Q9NRJ1 99 aa8.22□□□□□ -1.09
TRAPPC3-207ENST00000497251 SPCS1Q9Y6A9 102 aa8.22□□□□□ -1.09
TRAPPC3-207ENST00000497251 IGKV3D-7A0A0C4DH55 119 aa8.21□□□□□ -1.1
TRAPPC3-207ENST00000497251 SPINK7P58062 85 aa8.21□□□□□ -1.1
TRAPPC3-207ENST00000497251 COL5A1-AS1Q5SY13 56 aa8.2□□□□□ -1.1
TRAPPC3-207ENST00000497251 PRR15Q8IV56 129 aa8.19□□□□□ -1.1
TRAPPC3-207ENST00000497251 KRTAP19-6Q3LI70 58 aa8.18□□□□□ -1.1
TRAPPC3-207ENST00000497251 SYNE2Q8WXH0 6885 aaKnown RBP8.16□□□□□ -1.1
TRAPPC3-207ENST00000497251 Q6ZVQ6 151 aa8.15□□□□□ -1.1
TRAPPC3-207ENST00000497251 SMCPP49901 116 aaPredicted RBP8.13□□□□□ -1.11
TRAPPC3-207ENST00000497251 MMP24-AS1A0A0U1RRL7 71 aa8.11□□□□□ -1.11
TRAPPC3-207ENST00000497251 TMEM254Q8TBM7 123 aa8.11□□□□□ -1.11
TRAPPC3-207ENST00000497251 K7EP34 96 aa8.1□□□□□ -1.11
TRAPPC3-207ENST00000497251 K7EQZ3 153 aa8.1□□□□□ -1.11
TRAPPC3-207ENST00000497251 BPY2O14599 106 aa8.09□□□□□ -1.11
TRAPPC3-207ENST00000497251 MRPL34Q9BQ48 92 aaKnown RBP8.09□□□□□ -1.11
TRAPPC3-207ENST00000497251 PRO0461Q9UI25 63 aa8.09□□□□□ -1.11
TRAPPC3-207ENST00000497251 hDV103S1A0JD37 113 aa8.07□□□□□ -1.12
TRAPPC3-207ENST00000497251 WFDC13Q8IUB5 93 aa8.07□□□□□ -1.12
TRAPPC3-207ENST00000497251 GTF2H5Q6ZYL4 71 aa8.03□□□□□ -1.12
TRAPPC3-207ENST00000497251 UBL5Q9BZL1 73 aa8□□□□□ -1.13
TRAPPC3-207ENST00000497251 NDUFS5O43920 106 aa7.99□□□□□ -1.13
TRAPPC3-207ENST00000497251 KRTAP6-3Q3LI67 103 aa7.99□□□□□ -1.13
TRAPPC3-207ENST00000497251 PCP4L1A6NKN8 68 aa7.98□□□□□ -1.13
TRAPPC3-207ENST00000497251 H1FX-AS1Q4G0G2 97 aa7.98□□□□□ -1.13
TRAPPC3-207ENST00000497251 F8W1H4 67 aa7.97□□□□□ -1.13
TRAPPC3-207ENST00000497251 Q8N9L7 120 aa7.97□□□□□ -1.13
TRAPPC3-207ENST00000497251 CASC2Q6XLA1 102 aa7.96□□□□□ -1.14
TRAPPC3-207ENST00000497251 HCG22E2RYF7 251 aa7.9□□□□□ -1.14
TRAPPC3-207ENST00000497251 ETDBQ3ZM63 59 aa7.89□□□□□ -1.15
TRAPPC3-207ENST00000497251 Q5W150 140 aa7.89□□□□□ -1.15
TRAPPC3-207ENST00000497251 CXCL6P80162 114 aa7.88□□□□□ -1.15
TRAPPC3-207ENST00000497251 C7orf65Q6ZTY9 151 aa7.88□□□□□ -1.15
TRAPPC3-207ENST00000497251 IGKV2D-30A0A075B6S6 120 aa7.86□□□□□ -1.15
TRAPPC3-207ENST00000497251 IGKV2-30P06310 120 aa7.86□□□□□ -1.15
TRAPPC3-207ENST00000497251 ACYP1P07311 99 aa7.77□□□□□ -1.17
TRAPPC3-207ENST00000497251 TP53AIP1Q9HCN2 124 aa7.77□□□□□ -1.17
TRAPPC3-207ENST00000497251 FAM240AA0A1B0GVK7 77 aa7.74□□□□□ -1.17
TRAPPC3-207ENST00000497251 NEBP20929 6669 aa7.73□□□□□ -1.17
TRAPPC3-207ENST00000497251 C4orf26Q17RF5 130 aa7.71□□□□□ -1.18
TRAPPC3-207ENST00000497251 A6NN06 94 aa7.69□□□□□ -1.18
TRAPPC3-207ENST00000497251 ATP5EP2Q5VTU8 51 aa7.69□□□□□ -1.18
TRAPPC3-207ENST00000497251 FAM236AA0A1B0GUQ0 79 aa7.66□□□□□ -1.18
TRAPPC3-207ENST00000497251 FAM236BA0A1B0GV22 79 aa7.66□□□□□ -1.18
TRAPPC3-207ENST00000497251 Q5VV11 94 aa7.65□□□□□ -1.18
TRAPPC3-207ENST00000497251 CSAG1Q6PB30 78 aa7.63□□□□□ -1.19
TRAPPC3-207ENST00000497251 C5orf47Q569G3 176 aa7.62□□□□□ -1.19
TRAPPC3-207ENST00000497251 SPRR2GQ9BYE4 73 aa7.62□□□□□ -1.19
TRAPPC3-207ENST00000497251 KRTAP19-8Q3LI54 63 aa7.61□□□□□ -1.19
TRAPPC3-207ENST00000497251 KRTAP3-1Q9BYR8 98 aa7.6□□□□□ -1.19
TRAPPC3-207ENST00000497251 TRAV22A0A0B4J277 110 aa7.59□□□□□ -1.19
TRAPPC3-207ENST00000497251 MT1BP07438 61 aa7.59□□□□□ -1.19
TRAPPC3-207ENST00000497251 C1orf64Q8NEQ6 169 aa7.59□□□□□ -1.19
TRAPPC3-207ENST00000497251 HIST1H4AP62805 103 aaKnown RBP7.58□□□□□ -1.2
TRAPPC3-207ENST00000497251 S4R3F8 94 aa7.58□□□□□ -1.2
TRAPPC3-207ENST00000497251 MUC12Q9UKN1 5478 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 152.8 ms