RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 IGHV6-1A0A0B4J1U7 121 aa6.53□□□□□ -1.36
FN1-226ENST00000496542 LINC00472Q9H8W2 130 aa6.53□□□□□ -1.36
FN1-226ENST00000496542 PYY3Q5JQD4 70 aa6.52□□□□□ -1.37
FN1-226ENST00000496542 VPS25Q9BRG1 176 aa6.51□□□□□ -1.37
FN1-226ENST00000496542 USH2AO75445 5202 aa6.5□□□□□ -1.37
FN1-226ENST00000496542 UBE2V1Q13404 147 aa6.5□□□□□ -1.37
FN1-226ENST00000496542 HRES1P13985 223 aa6.49□□□□□ -1.37
FN1-226ENST00000496542 RBM12B-AS1Q9P1G2 102 aa6.49□□□□□ -1.37
FN1-226ENST00000496542 SCGB1C2P0DMR2 95 aa6.47□□□□□ -1.37
FN1-226ENST00000496542 UQCR10Q9UDW1 63 aa6.47□□□□□ -1.37
FN1-226ENST00000496542 SSPOA2VEC9 5147 aa6.47□□□□□ -1.37
FN1-226ENST00000496542 A0A1B0GVX0 72 aa6.46□□□□□ -1.38
FN1-226ENST00000496542 MT2AP02795 61 aa6.46□□□□□ -1.38
FN1-226ENST00000496542 RBM3P98179 157 aaKnown RBP6.46□□□□□ -1.38
FN1-226ENST00000496542 MPLKIPQ8TAP9 179 aa6.46□□□□□ -1.38
FN1-226ENST00000496542 C8orf87E5RJ46 101 aa6.45□□□□□ -1.38
FN1-226ENST00000496542 DSCR8Q96T75 97 aa6.45□□□□□ -1.38
FN1-226ENST00000496542 KRTAP19-1Q8IUB9 90 aa6.42□□□□□ -1.38
FN1-226ENST00000496542 MT1FP04733 61 aa6.41□□□□□ -1.38
FN1-226ENST00000496542 BAALC-AS2P0C853 105 aa6.41□□□□□ -1.38
FN1-226ENST00000496542 TMA7Q9Y2S6 64 aaKnown RBP6.41□□□□□ -1.38
FN1-226ENST00000496542 C9JAW5 83 aa6.4□□□□□ -1.38
FN1-226ENST00000496542 J3KT08 172 aa6.4□□□□□ -1.38
FN1-226ENST00000496542 ZCCHC13Q8WW36 166 aaKnown RBP6.4□□□□□ -1.38
FN1-226ENST00000496542 KRTAP10-10P60014 251 aa6.38□□□□□ -1.39
FN1-226ENST00000496542 C21orf62-AS1Q17RA5 79 aa6.38□□□□□ -1.39
FN1-226ENST00000496542 Q6ZQT0 140 aa6.38□□□□□ -1.39
FN1-226ENST00000496542 KRTAP4-7Q9BYR0 210 aa6.38□□□□□ -1.39
FN1-226ENST00000496542 MTURNQ8N3F0 131 aa6.37□□□□□ -1.39
FN1-226ENST00000496542 NDUFB1O75438 58 aa6.36□□□□□ -1.39
FN1-226ENST00000496542 SPINK7P58062 85 aa6.36□□□□□ -1.39
FN1-226ENST00000496542 KRTAP9-7A8MTY7 169 aa6.34□□□□□ -1.39
FN1-226ENST00000496542 NAA38Q9BRA0 125 aaKnown RBP6.34□□□□□ -1.39
FN1-226ENST00000496542 KRTAP9-3Q9BYQ3 159 aa6.34□□□□□ -1.39
FN1-226ENST00000496542 FCGBPQ9Y6R7 5405 aaPredicted RBP6.34□□□□□ -1.4
FN1-226ENST00000496542 ATXN8Q156A1 80 aa6.33□□□□□ -1.4
FN1-226ENST00000496542 LYRM7Q5U5X0 104 aa6.33□□□□□ -1.4
FN1-226ENST00000496542 Q8N9P0 234 aaPredicted RBP6.33□□□□□ -1.4
FN1-226ENST00000496542 C8orf17Q9NRJ1 99 aa6.33□□□□□ -1.4
FN1-226ENST00000496542 A8MWP4 228 aa6.32□□□□□ -1.4
FN1-226ENST00000496542 LCE1DQ5T752 114 aa6.32□□□□□ -1.4
FN1-226ENST00000496542 LOC110117498A0A087WWA1 95 aa6.31□□□□□ -1.4
FN1-226ENST00000496542 JMJD7-PLA2G4BH0Y9G9 81 aa6.31□□□□□ -1.4
FN1-226ENST00000496542 IGKV3D-7A0A0C4DH55 119 aa6.3□□□□□ -1.4
FN1-226ENST00000496542 M0R143 59 aa6.3□□□□□ -1.4
FN1-226ENST00000496542 WFDC13Q8IUB5 93 aa6.3□□□□□ -1.4
FN1-226ENST00000496542 C14orf132Q9NPU4 83 aa6.29□□□□□ -1.4
FN1-226ENST00000496542 PDE6GP18545 87 aa6.28□□□□□ -1.4
FN1-226ENST00000496542 Q6ZVQ6 151 aa6.28□□□□□ -1.4
FN1-226ENST00000496542 A0A1B0GW54 56 aa6.27□□□□□ -1.41
FN1-226ENST00000496542 PRR15Q8IV56 129 aa6.25□□□□□ -1.41
FN1-226ENST00000496542 NREPQ16612 68 aa6.24□□□□□ -1.41
FN1-226ENST00000496542 MMP24-AS1A0A0U1RRL7 71 aa6.22□□□□□ -1.41
FN1-226ENST00000496542 TMEM254Q8TBM7 123 aa6.21□□□□□ -1.42
FN1-226ENST00000496542 MRPL34Q9BQ48 92 aaKnown RBP6.2□□□□□ -1.42
FN1-226ENST00000496542 NDUFS5O43920 106 aa6.19□□□□□ -1.42
FN1-226ENST00000496542 K7EQZ3 153 aa6.18□□□□□ -1.42
FN1-226ENST00000496542 BATFQ16520 125 aa6.18□□□□□ -1.42
FN1-226ENST00000496542 hDV103S1A0JD37 113 aa6.17□□□□□ -1.42
FN1-226ENST00000496542 SMIM6P0DI80 62 aa6.16□□□□□ -1.42
FN1-226ENST00000496542 LINC00846Q9NV44 126 aa6.16□□□□□ -1.42
FN1-226ENST00000496542 H1FX-AS1Q4G0G2 97 aa6.15□□□□□ -1.42
FN1-226ENST00000496542 KRTAP4-9Q9BYQ8 210 aa6.15□□□□□ -1.42
FN1-226ENST00000496542 IGKV2D-30A0A075B6S6 120 aa6.14□□□□□ -1.43
FN1-226ENST00000496542 IGKV2-30P06310 120 aa6.14□□□□□ -1.43
FN1-226ENST00000496542 KRTAP19-6Q3LI70 58 aa6.13□□□□□ -1.43
FN1-226ENST00000496542 MACF1Q9UPN3 7388 aaKnown RBP6.13□□□□□ -1.43
FN1-226ENST00000496542 H3BT86 120 aa6.12□□□□□ -1.43
FN1-226ENST00000496542 BPY2O14599 106 aa6.12□□□□□ -1.43
FN1-226ENST00000496542 TSTD3H0UI37 97 aa6.11□□□□□ -1.43
FN1-226ENST00000496542 C7orf65Q6ZTY9 151 aa6.1□□□□□ -1.43
FN1-226ENST00000496542 KRTAP4-2Q9BYR5 136 aa6.1□□□□□ -1.43
FN1-226ENST00000496542 C9orf118A6NHY6 69 aa6.09□□□□□ -1.43
FN1-226ENST00000496542 Q5W150 140 aa6.09□□□□□ -1.43
FN1-226ENST00000496542 A0A1W2PPM0 123 aa6.08□□□□□ -1.44
FN1-226ENST00000496542 Q8N9L7 120 aa6.08□□□□□ -1.44
FN1-226ENST00000496542 SYNE2Q8WXH0 6885 aaKnown RBP6.08□□□□□ -1.44
FN1-226ENST00000496542 TAX1BP3O14907 124 aa6.07□□□□□ -1.44
FN1-226ENST00000496542 CASC2Q6XLA1 102 aa6.06□□□□□ -1.44
FN1-226ENST00000496542 HCG22E2RYF7 251 aa6.05□□□□□ -1.44
FN1-226ENST00000496542 C4orf26Q17RF5 130 aa6.03□□□□□ -1.44
FN1-226ENST00000496542 KRTAP19-4Q3LI73 84 aa6.02□□□□□ -1.45
FN1-226ENST00000496542 CXCL6P80162 114 aa6□□□□□ -1.45
FN1-226ENST00000496542 SPCS1Q9Y6A9 102 aa5.99□□□□□ -1.45
FN1-226ENST00000496542 C5orf47Q569G3 176 aa5.97□□□□□ -1.45
FN1-226ENST00000496542 FAM236AA0A1B0GUQ0 79 aa5.95□□□□□ -1.46
FN1-226ENST00000496542 FAM236BA0A1B0GV22 79 aa5.95□□□□□ -1.46
FN1-226ENST00000496542 UBL5Q9BZL1 73 aa5.95□□□□□ -1.46
FN1-226ENST00000496542 LOC105371267A0A1B0GV96 52 aa5.92□□□□□ -1.46
FN1-226ENST00000496542 S4R3F8 94 aa5.92□□□□□ -1.46
FN1-226ENST00000496542 KRTAP6-3Q3LI67 103 aa5.91□□□□□ -1.46
FN1-226ENST00000496542 KRTAP3-1Q9BYR8 98 aa5.91□□□□□ -1.46
FN1-226ENST00000496542 C1orf64Q8NEQ6 169 aa5.89□□□□□ -1.47
FN1-226ENST00000496542 PRO0461Q9UI25 63 aa5.89□□□□□ -1.47
FN1-226ENST00000496542 KRTAP4-11Q9BYQ6 195 aa5.88□□□□□ -1.47
FN1-226ENST00000496542 CSAG1Q6PB30 78 aa5.87□□□□□ -1.47
FN1-226ENST00000496542 K7EP34 96 aa5.86□□□□□ -1.47
FN1-226ENST00000496542 COL5A1-AS1Q5SY13 56 aa5.86□□□□□ -1.47
FN1-226ENST00000496542 LCA10Q71F78 164 aa5.86□□□□□ -1.47
FN1-226ENST00000496542 A6NN06 94 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms