RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 UQCR10Q9UDW1 63 aa7.24□□□□□ -1.25
VTI1A-209ENST00000496445 UBE2V1Q13404 147 aa7.23□□□□□ -1.25
VTI1A-209ENST00000496445 TRBV20-1A0A075B6N2 111 aa7.22□□□□□ -1.25
VTI1A-209ENST00000496445 TRACP01848 142 aa7.22□□□□□ -1.25
VTI1A-209ENST00000496445 SSPOA2VEC9 5147 aa7.21□□□□□ -1.25
VTI1A-209ENST00000496445 KRTAP9-8Q9BYQ0 159 aa7.21□□□□□ -1.26
VTI1A-209ENST00000496445 TMA7Q9Y2S6 64 aaKnown RBP7.2□□□□□ -1.26
VTI1A-209ENST00000496445 IGHV6-1A0A0B4J1U7 121 aa7.19□□□□□ -1.26
VTI1A-209ENST00000496445 HRES1P13985 223 aa7.18□□□□□ -1.26
VTI1A-209ENST00000496445 LCE1DQ5T752 114 aa7.18□□□□□ -1.26
VTI1A-209ENST00000496445 MPLKIPQ8TAP9 179 aa7.18□□□□□ -1.26
VTI1A-209ENST00000496445 VPS25Q9BRG1 176 aa7.18□□□□□ -1.26
VTI1A-209ENST00000496445 SCGB1C2P0DMR2 95 aa7.16□□□□□ -1.26
VTI1A-209ENST00000496445 RBM3P98179 157 aaKnown RBP7.16□□□□□ -1.26
VTI1A-209ENST00000496445 A0A1B0GVX0 72 aa7.14□□□□□ -1.27
VTI1A-209ENST00000496445 C8orf87E5RJ46 101 aa7.13□□□□□ -1.27
VTI1A-209ENST00000496445 DSCR8Q96T75 97 aa7.13□□□□□ -1.27
VTI1A-209ENST00000496445 FAM236DA0A1B0GTK5 79 aa7.12□□□□□ -1.27
VTI1A-209ENST00000496445 FAM236CP0DP71 79 aa7.12□□□□□ -1.27
VTI1A-209ENST00000496445 BAALC-AS2P0C853 105 aa7.11□□□□□ -1.27
VTI1A-209ENST00000496445 MT2AP02795 61 aa7.1□□□□□ -1.27
VTI1A-209ENST00000496445 LCE4AQ5TA78 99 aa7.1□□□□□ -1.27
VTI1A-209ENST00000496445 C9JAW5 83 aa7.09□□□□□ -1.27
VTI1A-209ENST00000496445 Q6ZQT0 140 aa7.09□□□□□ -1.27
VTI1A-209ENST00000496445 RBM12B-AS1Q9P1G2 102 aa7.09□□□□□ -1.27
VTI1A-209ENST00000496445 NAA38Q9BRA0 125 aaKnown RBP7.08□□□□□ -1.28
VTI1A-209ENST00000496445 J3KT08 172 aa7.07□□□□□ -1.28
VTI1A-209ENST00000496445 KRTAP4-7Q9BYR0 210 aa7.07□□□□□ -1.28
VTI1A-209ENST00000496445 MT1FP04733 61 aa7.06□□□□□ -1.28
VTI1A-209ENST00000496445 C21orf62-AS1Q17RA5 79 aa7.06□□□□□ -1.28
VTI1A-209ENST00000496445 ZCCHC13Q8WW36 166 aaKnown RBP7.06□□□□□ -1.28
VTI1A-209ENST00000496445 ATXN8Q156A1 80 aa7.05□□□□□ -1.28
VTI1A-209ENST00000496445 LOC110117498A0A087WWA1 95 aa7.03□□□□□ -1.28
VTI1A-209ENST00000496445 M0R143 59 aa7.03□□□□□ -1.28
VTI1A-209ENST00000496445 Q8N9P0 234 aaPredicted RBP7.03□□□□□ -1.28
VTI1A-209ENST00000496445 JMJD7-PLA2G4BH0Y9G9 81 aa7.02□□□□□ -1.29
VTI1A-209ENST00000496445 C8orf17Q9NRJ1 99 aa7.01□□□□□ -1.29
VTI1A-209ENST00000496445 A8MWP4 228 aa7□□□□□ -1.29
VTI1A-209ENST00000496445 SPINK7P58062 85 aa7□□□□□ -1.29
VTI1A-209ENST00000496445 FCGBPQ9Y6R7 5405 aaPredicted RBP6.99□□□□□ -1.29
VTI1A-209ENST00000496445 IGKV3D-7A0A0C4DH55 119 aa6.99□□□□□ -1.29
VTI1A-209ENST00000496445 A0A1B0GW54 56 aa6.99□□□□□ -1.29
VTI1A-209ENST00000496445 NDUFB1O75438 58 aa6.99□□□□□ -1.29
VTI1A-209ENST00000496445 C14orf132Q9NPU4 83 aa6.99□□□□□ -1.29
VTI1A-209ENST00000496445 KRTAP9-7A8MTY7 169 aa6.98□□□□□ -1.29
VTI1A-209ENST00000496445 KRTAP9-3Q9BYQ3 159 aa6.98□□□□□ -1.29
VTI1A-209ENST00000496445 PDE6GP18545 87 aa6.96□□□□□ -1.3
VTI1A-209ENST00000496445 KRTAP10-10P60014 251 aa6.96□□□□□ -1.3
VTI1A-209ENST00000496445 SMIM6P0DI80 62 aa6.95□□□□□ -1.3
VTI1A-209ENST00000496445 MTURNQ8N3F0 131 aa6.95□□□□□ -1.3
VTI1A-209ENST00000496445 Q6ZVQ6 151 aa6.94□□□□□ -1.3
VTI1A-209ENST00000496445 KRTAP4-9Q9BYQ8 210 aa6.94□□□□□ -1.3
VTI1A-209ENST00000496445 WFDC13Q8IUB5 93 aa6.93□□□□□ -1.3
VTI1A-209ENST00000496445 PRR15Q8IV56 129 aa6.93□□□□□ -1.3
VTI1A-209ENST00000496445 MMP24-AS1A0A0U1RRL7 71 aa6.92□□□□□ -1.3
VTI1A-209ENST00000496445 LYRM7Q5U5X0 104 aa6.91□□□□□ -1.3
VTI1A-209ENST00000496445 NREPQ16612 68 aa6.9□□□□□ -1.3
VTI1A-209ENST00000496445 BATFQ16520 125 aa6.89□□□□□ -1.31
VTI1A-209ENST00000496445 TMEM254Q8TBM7 123 aa6.89□□□□□ -1.31
VTI1A-209ENST00000496445 K7EQZ3 153 aa6.87□□□□□ -1.31
VTI1A-209ENST00000496445 MRPL34Q9BQ48 92 aaKnown RBP6.87□□□□□ -1.31
VTI1A-209ENST00000496445 TSTD3H0UI37 97 aa6.86□□□□□ -1.31
VTI1A-209ENST00000496445 H3BT86 120 aa6.85□□□□□ -1.31
VTI1A-209ENST00000496445 hDV103S1A0JD37 113 aa6.83□□□□□ -1.32
VTI1A-209ENST00000496445 C9orf118A6NHY6 69 aa6.83□□□□□ -1.32
VTI1A-209ENST00000496445 TAX1BP3O14907 124 aa6.83□□□□□ -1.32
VTI1A-209ENST00000496445 A0A1W2PPM0 123 aa6.82□□□□□ -1.32
VTI1A-209ENST00000496445 SYNE2Q8WXH0 6885 aaKnown RBP6.8□□□□□ -1.32
VTI1A-209ENST00000496445 MACF1Q9UPN3 7388 aaKnown RBP6.79□□□□□ -1.32
VTI1A-209ENST00000496445 NDUFS5O43920 106 aa6.79□□□□□ -1.32
VTI1A-209ENST00000496445 BPY2O14599 106 aa6.77□□□□□ -1.33
VTI1A-209ENST00000496445 Q5W150 140 aa6.77□□□□□ -1.33
VTI1A-209ENST00000496445 H1FX-AS1Q4G0G2 97 aa6.76□□□□□ -1.33
VTI1A-209ENST00000496445 Q8N9L7 120 aa6.76□□□□□ -1.33
VTI1A-209ENST00000496445 IGKV2D-30A0A075B6S6 120 aa6.75□□□□□ -1.33
VTI1A-209ENST00000496445 LOC105371267A0A1B0GV96 52 aa6.75□□□□□ -1.33
VTI1A-209ENST00000496445 IGKV2-30P06310 120 aa6.75□□□□□ -1.33
VTI1A-209ENST00000496445 KRTAP4-2Q9BYR5 136 aa6.75□□□□□ -1.33
VTI1A-209ENST00000496445 KRTAP19-6Q3LI70 58 aa6.74□□□□□ -1.33
VTI1A-209ENST00000496445 LCE5AQ5TCM9 118 aa6.74□□□□□ -1.33
VTI1A-209ENST00000496445 C7orf65Q6ZTY9 151 aa6.72□□□□□ -1.33
VTI1A-209ENST00000496445 KRTAP4-11Q9BYQ6 195 aa6.72□□□□□ -1.33
VTI1A-209ENST00000496445 CASC2Q6XLA1 102 aa6.71□□□□□ -1.34
VTI1A-209ENST00000496445 SPCS1Q9Y6A9 102 aa6.71□□□□□ -1.34
VTI1A-209ENST00000496445 HCG22E2RYF7 251 aa6.69□□□□□ -1.34
VTI1A-209ENST00000496445 C4orf26Q17RF5 130 aa6.65□□□□□ -1.34
VTI1A-209ENST00000496445 PRO0461Q9UI25 63 aa6.65□□□□□ -1.34
VTI1A-209ENST00000496445 LINC00846Q9NV44 126 aa6.64□□□□□ -1.35
VTI1A-209ENST00000496445 CXCL6P80162 114 aa6.63□□□□□ -1.35
VTI1A-209ENST00000496445 UBL5Q9BZL1 73 aa6.6□□□□□ -1.35
VTI1A-209ENST00000496445 K7EP34 96 aa6.58□□□□□ -1.36
VTI1A-209ENST00000496445 KRTAP3-1Q9BYR8 98 aa6.58□□□□□ -1.36
VTI1A-209ENST00000496445 COL5A1-AS1Q5SY13 56 aa6.57□□□□□ -1.36
VTI1A-209ENST00000496445 C5orf47Q569G3 176 aa6.54□□□□□ -1.36
VTI1A-209ENST00000496445 S4R3F8 94 aa6.51□□□□□ -1.37
VTI1A-209ENST00000496445 LCA10Q71F78 164 aa6.49□□□□□ -1.37
VTI1A-209ENST00000496445 C1orf64Q8NEQ6 169 aa6.49□□□□□ -1.37
VTI1A-209ENST00000496445 FAM236AA0A1B0GUQ0 79 aa6.48□□□□□ -1.37
VTI1A-209ENST00000496445 FAM236BA0A1B0GV22 79 aa6.48□□□□□ -1.37
VTI1A-209ENST00000496445 TP53AIP1Q9HCN2 124 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms