RNA–Protein interactions for RNA: ENST00000495394.1

RPSA-209, Transcript of ribosomal protein SA, humanhuman

TSL 1 (best)

Gene RPSA, Length 2,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-209ENST00000495394 Q96NJ1 140 aa5.55□□□□□ -1.52
RPSA-209ENST00000495394 COL7A1Q02388 2944 aa5.54□□□□□ -1.52
RPSA-209ENST00000495394 TENM3Q9P273 2699 aa5.53□□□□□ -1.52
RPSA-209ENST00000495394 DEFB130BP0DP73 79 aa5.52□□□□□ -1.53
RPSA-209ENST00000495394 DEFB130AP0DP74 79 aa5.52□□□□□ -1.53
RPSA-209ENST00000495394 Q8N377 158 aa5.52□□□□□ -1.53
RPSA-209ENST00000495394 PRO0255Q9UI72 69 aa5.52□□□□□ -1.53
RPSA-209ENST00000495394 A0A1B0GUV1 79 aa5.51□□□□□ -1.53
RPSA-209ENST00000495394 DNAH9Q9NYC9 4486 aa5.5□□□□□ -1.53
RPSA-209ENST00000495394 STAB2Q8WWQ8 2551 aa5.5□□□□□ -1.53
RPSA-209ENST00000495394 DSCR10P59022 87 aa5.49□□□□□ -1.53
RPSA-209ENST00000495394 LCE2AQ5TA79 106 aaPredicted RBP5.48□□□□□ -1.53
RPSA-209ENST00000495394 LINC00304Q8N9R0 145 aa5.48□□□□□ -1.53
RPSA-209ENST00000495394 EPPK1P58107 5090 aaKnown RBP5.48□□□□□ -1.53
RPSA-209ENST00000495394 HUWE1Q7Z6Z7 4374 aaKnown RBP5.47□□□□□ -1.53
RPSA-209ENST00000495394 DYNC2H1Q8NCM8 4307 aaKnown RBP5.46□□□□□ -1.53
RPSA-209ENST00000495394 TOMM7Q9P0U1 55 aa5.46□□□□□ -1.53
RPSA-209ENST00000495394 K7EQZ3 153 aa5.46□□□□□ -1.54
RPSA-209ENST00000495394 DEFB4AO15263 64 aa5.45□□□□□ -1.54
RPSA-209ENST00000495394 RYR2Q92736 4967 aa5.45□□□□□ -1.54
RPSA-209ENST00000495394 SPART-AS1P0CW21 52 aa5.44□□□□□ -1.54
RPSA-209ENST00000495394 A0A096LPF7 62 aa5.44□□□□□ -1.54
RPSA-209ENST00000495394 KRTAP29-1A8MX34 341 aaPredicted RBP5.43□□□□□ -1.54
RPSA-209ENST00000495394 RPL37AP61513 92 aaKnown RBP5.43□□□□□ -1.54
RPSA-209ENST00000495394 DEFB116Q30KQ4 102 aa5.42□□□□□ -1.54
RPSA-209ENST00000495394 LELP1Q5T871 98 aa5.41□□□□□ -1.54
RPSA-209ENST00000495394 CLPSL2Q6UWE3 100 aa5.41□□□□□ -1.54
RPSA-209ENST00000495394 ANGP03950 147 aaKnown RBP5.41□□□□□ -1.54
RPSA-209ENST00000495394 KRTAP11-1Q8IUC1 163 aa5.41□□□□□ -1.54
RPSA-209ENST00000495394 SSBP3-AS1Q7Z2R9 100 aa5.4□□□□□ -1.54
RPSA-209ENST00000495394 FAM168BA1KXE4 195 aa5.39□□□□□ -1.55
RPSA-209ENST00000495394 A0A1W2PNN7 141 aa5.38□□□□□ -1.55
RPSA-209ENST00000495394 HTN3P15516 51 aa5.38□□□□□ -1.55
RPSA-209ENST00000495394 DNAH1Q9P2D7 4330 aa5.38□□□□□ -1.55
RPSA-209ENST00000495394 DNAH7Q8WXX0 4024 aa5.38□□□□□ -1.55
RPSA-209ENST00000495394 H3BNG1 76 aa5.38□□□□□ -1.55
RPSA-209ENST00000495394 ACYP2P14621 99 aa5.38□□□□□ -1.55
RPSA-209ENST00000495394 LORP23490 312 aaPredicted RBP5.38□□□□□ -1.55
RPSA-209ENST00000495394 PRO2289Q9P1D8 64 aa5.38□□□□□ -1.55
RPSA-209ENST00000495394 CSMD3Q7Z407 3707 aa5.37□□□□□ -1.55
RPSA-209ENST00000495394 WFDC13Q8IUB5 93 aa5.36□□□□□ -1.55
RPSA-209ENST00000495394 SACSQ9NZJ4 4579 aa5.36□□□□□ -1.55
RPSA-209ENST00000495394 PCOTHQ58A44 107 aa5.35□□□□□ -1.55
RPSA-209ENST00000495394 IGLV5-48A0A075B6I7 105 aa5.35□□□□□ -1.55
RPSA-209ENST00000495394 TENM2Q9NT68 2774 aa5.34□□□□□ -1.55
RPSA-209ENST00000495394 GVQW2A0A096LPI5 108 aaPredicted RBP5.33□□□□□ -1.56
RPSA-209ENST00000495394 IGLV6-57P01721 117 aa5.33□□□□□ -1.56
RPSA-209ENST00000495394 A0A0G2JQZ4 141 aa5.32□□□□□ -1.56
RPSA-209ENST00000495394 WFDC10BQ8IUB3 73 aa5.32□□□□□ -1.56
RPSA-209ENST00000495394 STARD9Q9P2P6 4700 aa5.31□□□□□ -1.56
RPSA-209ENST00000495394 HYDINQ4G0P3 5121 aa5.31□□□□□ -1.56
RPSA-209ENST00000495394 UNQ6190/PRO20217Q6UXQ8 127 aa5.31□□□□□ -1.56
RPSA-209ENST00000495394 APLNQ9ULZ1 77 aa5.31□□□□□ -1.56
RPSA-209ENST00000495394 HERC2O95714 4834 aa5.31□□□□□ -1.56
RPSA-209ENST00000495394 TP53AIP1Q9HCN2 124 aa5.3□□□□□ -1.56
RPSA-209ENST00000495394 LY6G6CO95867 125 aa5.28□□□□□ -1.56
RPSA-209ENST00000495394 ALMS1Q8TCU4 4167 aa5.28□□□□□ -1.56
RPSA-209ENST00000495394 IGKV2-24A0A0C4DH68 120 aa5.28□□□□□ -1.56
RPSA-209ENST00000495394 C6orf48Q9UBA6 75 aa5.28□□□□□ -1.56
RPSA-209ENST00000495394 PCLOQ9Y6V0 5065 aa5.28□□□□□ -1.56
RPSA-209ENST00000495394 LINC01556Q5JQF7 62 aa5.27□□□□□ -1.57
RPSA-209ENST00000495394 R4GN34 69 aa5.27□□□□□ -1.57
RPSA-209ENST00000495394 PSORS1C2Q9UIG4 136 aa5.27□□□□□ -1.57
RPSA-209ENST00000495394 TYMSOSQ8TAI1 123 aa5.26□□□□□ -1.57
RPSA-209ENST00000495394 ANAPC11Q9NYG5 84 aa5.26□□□□□ -1.57
RPSA-209ENST00000495394 LYSTQ99698 3801 aa5.26□□□□□ -1.57
RPSA-209ENST00000495394 PLECQ15149 4684 aaKnown RBP5.26□□□□□ -1.57
RPSA-209ENST00000495394 UBE2DNLQ8IWF7 75 aa5.25□□□□□ -1.57
RPSA-209ENST00000495394 CRIPTQ9P021 101 aa5.25□□□□□ -1.57
RPSA-209ENST00000495394 SPACA4Q8TDM5 124 aa5.21□□□□□ -1.58
RPSA-209ENST00000495394 TPRXLQ17RH7 258 aa5.2□□□□□ -1.58
RPSA-209ENST00000495394 RYR1P21817 5038 aa5.19□□□□□ -1.58
RPSA-209ENST00000495394 VPS13DQ5THJ4 4388 aa5.17□□□□□ -1.58
RPSA-209ENST00000495394 KMT2AQ03164 3969 aa5.15□□□□□ -1.58
RPSA-209ENST00000495394 Q6ZRX8 168 aa5.14□□□□□ -1.59
RPSA-209ENST00000495394 KRTAP1-5Q9BYS1 174 aa5.14□□□□□ -1.59
RPSA-209ENST00000495394 DNAH6Q9C0G6 4158 aa5.14□□□□□ -1.59
RPSA-209ENST00000495394 H0YAA0 97 aa5.12□□□□□ -1.59
RPSA-209ENST00000495394 MMP24-AS1A0A0U1RRL7 71 aa5.09□□□□□ -1.59
RPSA-209ENST00000495394 SPRR1AP35321 89 aa5.09□□□□□ -1.59
RPSA-209ENST00000495394 C14orf177Q52M58 125 aa5.08□□□□□ -1.6
RPSA-209ENST00000495394 Q6ZRN7 208 aaPredicted RBP5.08□□□□□ -1.6
RPSA-209ENST00000495394 HECTD4Q9Y4D8 3996 aa5.08□□□□□ -1.6
RPSA-209ENST00000495394 KIAA1109Q2LD37 5005 aa5.08□□□□□ -1.6
RPSA-209ENST00000495394 KRTAP7-1Q8IUC3 87 aa5.08□□□□□ -1.6
RPSA-209ENST00000495394 DNAH2Q9P225 4427 aa5.06□□□□□ -1.6
RPSA-209ENST00000495394 PLAC4Q8WY50 150 aa5.06□□□□□ -1.6
RPSA-209ENST00000495394 FRAS1Q86XX4 4008 aa5.05□□□□□ -1.6
RPSA-209ENST00000495394 DNAH10Q8IVF4 4471 aa5.05□□□□□ -1.6
RPSA-209ENST00000495394 DEFB105AQ8NG35 78 aa5.03□□□□□ -1.6
RPSA-209ENST00000495394 ABCA13Q86UQ4 5058 aa5.02□□□□□ -1.61
RPSA-209ENST00000495394 A0A096LNI7 61 aa5.02□□□□□ -1.61
RPSA-209ENST00000495394 Q6ZSA8 131 aa5.02□□□□□ -1.61
RPSA-209ENST00000495394 A0A1B0GVY2 172 aa5.01□□□□□ -1.61
RPSA-209ENST00000495394 MRPL34Q9BQ48 92 aaKnown RBP5.01□□□□□ -1.61
RPSA-209ENST00000495394 DNAH17Q9UFH2 4485 aa5.01□□□□□ -1.61
RPSA-209ENST00000495394 LOC100996750A0A140TA64 210 aa5.01□□□□□ -1.61
RPSA-209ENST00000495394 KRTAP4-6Q9BYQ5 205 aa5.01□□□□□ -1.61
RPSA-209ENST00000495394 FAT2Q9NYQ8 4349 aa5□□□□□ -1.61
RPSA-209ENST00000495394 INE1O15225 51 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms