RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 CCKP06307 115 aa6.82□□□□□ -1.32
VARS-228ENST00000495010 A0A1B0GVX0 72 aa6.81□□□□□ -1.32
VARS-228ENST00000495010 H3BQ85 93 aa6.81□□□□□ -1.32
VARS-228ENST00000495010 ORMDL1Q9P0S3 153 aa6.81□□□□□ -1.32
VARS-228ENST00000495010 WFDC13Q8IUB5 93 aa6.79□□□□□ -1.32
VARS-228ENST00000495010 C14orf144Q96I85 54 aa6.79□□□□□ -1.32
VARS-228ENST00000495010 PRO1854Q9UHT4 67 aa6.79□□□□□ -1.32
VARS-228ENST00000495010 LYRM7Q5U5X0 104 aa6.78□□□□□ -1.32
VARS-228ENST00000495010 UQCR10Q9UDW1 63 aa6.78□□□□□ -1.32
VARS-228ENST00000495010 TMEM256-PLSCR3K7ERE1 68 aa6.77□□□□□ -1.33
VARS-228ENST00000495010 VPS25Q9BRG1 176 aa6.77□□□□□ -1.33
VARS-228ENST00000495010 TSTD3H0UI37 97 aa6.76□□□□□ -1.33
VARS-228ENST00000495010 HIGD1BQ9P298 99 aa6.76□□□□□ -1.33
VARS-228ENST00000495010 TMEM238LA0A1B0GVL6 79 aa6.75□□□□□ -1.33
VARS-228ENST00000495010 A6NJY4 79 aa6.75□□□□□ -1.33
VARS-228ENST00000495010 TRIAP1O43715 76 aa6.75□□□□□ -1.33
VARS-228ENST00000495010 J3KT08 172 aa6.73□□□□□ -1.33
VARS-228ENST00000495010 CEND1Q8N111 149 aa6.73□□□□□ -1.33
VARS-228ENST00000495010 NDUFB1O75438 58 aa6.71□□□□□ -1.34
VARS-228ENST00000495010 PSMB2P49721 201 aa6.71□□□□□ -1.34
VARS-228ENST00000495010 C2orf91Q6ZV80 131 aa6.7□□□□□ -1.34
VARS-228ENST00000495010 COX6CP09669 75 aa6.69□□□□□ -1.34
VARS-228ENST00000495010 HSD52Q0P140 79 aa6.69□□□□□ -1.34
VARS-228ENST00000495010 UBE2V1Q13404 147 aa6.69□□□□□ -1.34
VARS-228ENST00000495010 RBM3P98179 157 aaKnown RBP6.68□□□□□ -1.34
VARS-228ENST00000495010 C21orf62-AS1Q17RA5 79 aa6.68□□□□□ -1.34
VARS-228ENST00000495010 DSCR8Q96T75 97 aa6.68□□□□□ -1.34
VARS-228ENST00000495010 H1FX-AS1Q4G0G2 97 aa6.67□□□□□ -1.34
VARS-228ENST00000495010 FXYD2P54710 66 aa6.66□□□□□ -1.34
VARS-228ENST00000495010 M0R143 59 aa6.65□□□□□ -1.34
VARS-228ENST00000495010 IGKV3D-7A0A0C4DH55 119 aa6.64□□□□□ -1.35
VARS-228ENST00000495010 C8orf17Q9NRJ1 99 aa6.64□□□□□ -1.35
VARS-228ENST00000495010 C9JAW5 83 aa6.62□□□□□ -1.35
VARS-228ENST00000495010 Q6ZQT0 140 aa6.61□□□□□ -1.35
VARS-228ENST00000495010 NEBP20929 6669 aa6.61□□□□□ -1.35
VARS-228ENST00000495010 A6NN06 94 aa6.6□□□□□ -1.35
VARS-228ENST00000495010 KRTAP20-1Q3LI63 56 aa6.6□□□□□ -1.35
VARS-228ENST00000495010 Q6ZVQ6 151 aa6.6□□□□□ -1.35
VARS-228ENST00000495010 K7ERJ3 54 aa6.59□□□□□ -1.35
VARS-228ENST00000495010 SCGB1C2P0DMR2 95 aa6.56□□□□□ -1.36
VARS-228ENST00000495010 PCP4L1A6NKN8 68 aa6.55□□□□□ -1.36
VARS-228ENST00000495010 BATFQ16520 125 aa6.54□□□□□ -1.36
VARS-228ENST00000495010 FAM236AA0A1B0GUQ0 79 aa6.53□□□□□ -1.36
VARS-228ENST00000495010 FAM236BA0A1B0GV22 79 aa6.53□□□□□ -1.36
VARS-228ENST00000495010 BAALC-AS2P0C853 105 aa6.53□□□□□ -1.36
VARS-228ENST00000495010 NDUFS5O43920 106 aa6.52□□□□□ -1.37
VARS-228ENST00000495010 MRPL34Q9BQ48 92 aaKnown RBP6.52□□□□□ -1.37
VARS-228ENST00000495010 IGKV2D-30A0A075B6S6 120 aa6.51□□□□□ -1.37
VARS-228ENST00000495010 IGKV2-30P06310 120 aa6.51□□□□□ -1.37
VARS-228ENST00000495010 PRR15Q8IV56 129 aa6.51□□□□□ -1.37
VARS-228ENST00000495010 TMEM254Q8TBM7 123 aa6.51□□□□□ -1.37
VARS-228ENST00000495010 A0A1B0GW54 56 aa6.5□□□□□ -1.37
VARS-228ENST00000495010 Q5VV11 94 aa6.5□□□□□ -1.37
VARS-228ENST00000495010 COL5A1-AS1Q5SY13 56 aa6.48□□□□□ -1.37
VARS-228ENST00000495010 MUC12Q9UKN1 5478 aa6.48□□□□□ -1.37
VARS-228ENST00000495010 JMJD7-PLA2G4BH0Y9G9 81 aa6.47□□□□□ -1.37
VARS-228ENST00000495010 C7orf65Q6ZTY9 151 aa6.47□□□□□ -1.37
VARS-228ENST00000495010 MMP24-AS1A0A0U1RRL7 71 aa6.46□□□□□ -1.38
VARS-228ENST00000495010 NREPQ16612 68 aa6.46□□□□□ -1.38
VARS-228ENST00000495010 hDV103S1A0JD37 113 aa6.45□□□□□ -1.38
VARS-228ENST00000495010 MT1BP07438 61 aa6.45□□□□□ -1.38
VARS-228ENST00000495010 PDE6GP18545 87 aa6.45□□□□□ -1.38
VARS-228ENST00000495010 LOC110117498A0A087WWA1 95 aa6.44□□□□□ -1.38
VARS-228ENST00000495010 C5orf47Q569G3 176 aa6.44□□□□□ -1.38
VARS-228ENST00000495010 C9orf118A6NHY6 69 aa6.43□□□□□ -1.38
VARS-228ENST00000495010 TAX1BP3O14907 124 aa6.41□□□□□ -1.38
VARS-228ENST00000495010 KRTAP5-9P26371 169 aa6.41□□□□□ -1.38
VARS-228ENST00000495010 C4orf26Q17RF5 130 aa6.41□□□□□ -1.38
VARS-228ENST00000495010 KRTAP10-5P60370 271 aa6.4□□□□□ -1.38
VARS-228ENST00000495010 ATXN8Q156A1 80 aa6.4□□□□□ -1.38
VARS-228ENST00000495010 KRTAP19-8Q3LI54 63 aa6.39□□□□□ -1.39
VARS-228ENST00000495010 C14orf132Q9NPU4 83 aa6.39□□□□□ -1.39
VARS-228ENST00000495010 A0A1W2PPM0 123 aa6.38□□□□□ -1.39
VARS-228ENST00000495010 K7EQZ3 153 aa6.38□□□□□ -1.39
VARS-228ENST00000495010 SPRR2GQ9BYE4 73 aa6.38□□□□□ -1.39
VARS-228ENST00000495010 Q5W150 140 aa6.37□□□□□ -1.39
VARS-228ENST00000495010 NAA38Q9BRA0 125 aaKnown RBP6.37□□□□□ -1.39
VARS-228ENST00000495010 CSAG1Q6PB30 78 aa6.36□□□□□ -1.39
VARS-228ENST00000495010 IMUPQ9GZP8 106 aa6.35□□□□□ -1.39
VARS-228ENST00000495010 S4R3F8 94 aa6.35□□□□□ -1.39
VARS-228ENST00000495010 KRTAP2-3P0C7H8 128 aa6.33□□□□□ -1.4
VARS-228ENST00000495010 KRTAP2-4Q9BYR9 128 aa6.33□□□□□ -1.4
VARS-228ENST00000495010 SPCS1Q9Y6A9 102 aa6.33□□□□□ -1.4
VARS-228ENST00000495010 GTF2H5Q6ZYL4 71 aa6.32□□□□□ -1.4
VARS-228ENST00000495010 HCG22E2RYF7 251 aa6.31□□□□□ -1.4
VARS-228ENST00000495010 BPY2O14599 106 aa6.3□□□□□ -1.4
VARS-228ENST00000495010 CASC2Q6XLA1 102 aa6.29□□□□□ -1.4
VARS-228ENST00000495010 K7EP34 96 aa6.28□□□□□ -1.4
VARS-228ENST00000495010 KLKP1Q107X0 134 aa6.28□□□□□ -1.4
VARS-228ENST00000495010 LCA10Q71F78 164 aa6.27□□□□□ -1.41
VARS-228ENST00000495010 KMT2DO14686 5537 aa6.27□□□□□ -1.41
VARS-228ENST00000495010 H3BT86 120 aa6.26□□□□□ -1.41
VARS-228ENST00000495010 CXCL6P80162 114 aa6.26□□□□□ -1.41
VARS-228ENST00000495010 C1orf64Q8NEQ6 169 aa6.25□□□□□ -1.41
VARS-228ENST00000495010 KRTAP3-1Q9BYR8 98 aa6.24□□□□□ -1.41
VARS-228ENST00000495010 MDN1Q9NU22 5596 aa6.23□□□□□ -1.41
VARS-228ENST00000495010 F8W1H4 67 aa6.22□□□□□ -1.41
VARS-228ENST00000495010 Q8N9L7 120 aa6.21□□□□□ -1.42
VARS-228ENST00000495010 A0A1B0GV90 55 aa6.19□□□□□ -1.42
VARS-228ENST00000495010 SPRR2EP22531 72 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms