RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 JMJD7-PLA2G4BH0Y9G9 81 aa16.98■□□□□ 0.31
CBX4-203ENST00000494546 Q6ZQT0 140 aa16.97■□□□□ 0.31
CBX4-203ENST00000494546 C8orf87E5RJ46 101 aa16.96■□□□□ 0.31
CBX4-203ENST00000494546 BATFQ16520 125 aa16.96■□□□□ 0.31
CBX4-203ENST00000494546 J3KT08 172 aa16.94■□□□□ 0.3
CBX4-203ENST00000494546 LYRM7Q5U5X0 104 aa16.94■□□□□ 0.3
CBX4-203ENST00000494546 LOC110117498A0A087WWA1 95 aa16.89■□□□□ 0.29
CBX4-203ENST00000494546 C14orf132Q9NPU4 83 aa16.86■□□□□ 0.29
CBX4-203ENST00000494546 PDE6GP18545 87 aa16.85■□□□□ 0.29
CBX4-203ENST00000494546 A0A1B0GW54 56 aa16.82■□□□□ 0.28
CBX4-203ENST00000494546 NDUFB1O75438 58 aa16.82■□□□□ 0.28
CBX4-203ENST00000494546 CRCT1Q9UGL9 99 aa16.81■□□□□ 0.28
CBX4-203ENST00000494546 FAM236DA0A1B0GTK5 79 aa16.79■□□□□ 0.28
CBX4-203ENST00000494546 FAM236CP0DP71 79 aa16.79■□□□□ 0.28
CBX4-203ENST00000494546 LOC105371267A0A1B0GV96 52 aa16.77■□□□□ 0.28
CBX4-203ENST00000494546 HRES1P13985 223 aa16.74■□□□□ 0.27
CBX4-203ENST00000494546 A8MWP4 228 aa16.73■□□□□ 0.27
CBX4-203ENST00000494546 FSIP2Q5CZC0 6907 aa16.73■□□□□ 0.27
CBX4-203ENST00000494546 C9orf118A6NHY6 69 aa16.72■□□□□ 0.27
CBX4-203ENST00000494546 RBM12B-AS1Q9P1G2 102 aa16.72■□□□□ 0.27
CBX4-203ENST00000494546 ZCCHC13Q8WW36 166 aaKnown RBP16.71■□□□□ 0.27
CBX4-203ENST00000494546 C8orf17Q9NRJ1 99 aa16.69■□□□□ 0.26
CBX4-203ENST00000494546 TAX1BP3O14907 124 aa16.68■□□□□ 0.26
CBX4-203ENST00000494546 MPLKIPQ8TAP9 179 aa16.68■□□□□ 0.26
CBX4-203ENST00000494546 IGKV3D-7A0A0C4DH55 119 aa16.67■□□□□ 0.26
CBX4-203ENST00000494546 NREPQ16612 68 aa16.66■□□□□ 0.26
CBX4-203ENST00000494546 A0A1W2PPM0 123 aa16.65■□□□□ 0.26
CBX4-203ENST00000494546 MTURNQ8N3F0 131 aa16.64■□□□□ 0.25
CBX4-203ENST00000494546 Q8N9P0 234 aaPredicted RBP16.64■□□□□ 0.25
CBX4-203ENST00000494546 H3BT86 120 aa16.63■□□□□ 0.25
CBX4-203ENST00000494546 SPINK7P58062 85 aa16.57■□□□□ 0.24
CBX4-203ENST00000494546 PRR15Q8IV56 129 aa16.57■□□□□ 0.24
CBX4-203ENST00000494546 Q6ZVQ6 151 aa16.56■□□□□ 0.24
CBX4-203ENST00000494546 KRTAP9-8Q9BYQ0 159 aa16.55■□□□□ 0.24
CBX4-203ENST00000494546 MMP24-AS1A0A0U1RRL7 71 aa16.44■□□□□ 0.22
CBX4-203ENST00000494546 SPCS1Q9Y6A9 102 aa16.44■□□□□ 0.22
CBX4-203ENST00000494546 TMEM254Q8TBM7 123 aa16.42■□□□□ 0.22
CBX4-203ENST00000494546 K7EQZ3 153 aa16.41■□□□□ 0.22
CBX4-203ENST00000494546 MRPL34Q9BQ48 92 aaKnown RBP16.41■□□□□ 0.22
CBX4-203ENST00000494546 BPY2O14599 106 aa16.36■□□□□ 0.21
CBX4-203ENST00000494546 hDV103S1A0JD37 113 aa16.35■□□□□ 0.21
CBX4-203ENST00000494546 WFDC13Q8IUB5 93 aa16.35■□□□□ 0.21
CBX4-203ENST00000494546 MT2AP02795 61 aa16.34■□□□□ 0.21
CBX4-203ENST00000494546 NDUFS5O43920 106 aa16.31■□□□□ 0.2
CBX4-203ENST00000494546 SMCPP49901 116 aaPredicted RBP16.29■□□□□ 0.2
CBX4-203ENST00000494546 COL5A1-AS1Q5SY13 56 aa16.28■□□□□ 0.2
CBX4-203ENST00000494546 MT1FP04733 61 aa16.22■□□□□ 0.19
CBX4-203ENST00000494546 Q8N9L7 120 aa16.2■□□□□ 0.18
CBX4-203ENST00000494546 KRTAP10-10P60014 251 aa16.17■□□□□ 0.18
CBX4-203ENST00000494546 PRO0461Q9UI25 63 aa16.16■□□□□ 0.18
CBX4-203ENST00000494546 K7EP34 96 aa16.15■□□□□ 0.18
CBX4-203ENST00000494546 CASC2Q6XLA1 102 aa16.12■□□□□ 0.17
CBX4-203ENST00000494546 Q5W150 140 aa16.08■□□□□ 0.16
CBX4-203ENST00000494546 IGKV2D-30A0A075B6S6 120 aa16.07■□□□□ 0.16
CBX4-203ENST00000494546 IGKV2-30P06310 120 aa16.07■□□□□ 0.16
CBX4-203ENST00000494546 LINC00846Q9NV44 126 aa16.07■□□□□ 0.16
CBX4-203ENST00000494546 UBL5Q9BZL1 73 aa16.06■□□□□ 0.16
CBX4-203ENST00000494546 HCG22E2RYF7 251 aa16.05■□□□□ 0.16
CBX4-203ENST00000494546 KRTAP9-3Q9BYQ3 159 aa16.04■□□□□ 0.16
CBX4-203ENST00000494546 C7orf65Q6ZTY9 151 aa16■□□□□ 0.15
CBX4-203ENST00000494546 USH2AO75445 5202 aa15.99■□□□□ 0.15
CBX4-203ENST00000494546 H1FX-AS1Q4G0G2 97 aa15.97■□□□□ 0.15
CBX4-203ENST00000494546 LCE2BO14633 110 aa15.96■□□□□ 0.15
CBX4-203ENST00000494546 GTF2H5Q6ZYL4 71 aa15.94■□□□□ 0.14
CBX4-203ENST00000494546 PCP4L1A6NKN8 68 aa15.91■□□□□ 0.14
CBX4-203ENST00000494546 CXCL6P80162 114 aa15.91■□□□□ 0.14
CBX4-203ENST00000494546 SSPOA2VEC9 5147 aa15.84■□□□□ 0.13
CBX4-203ENST00000494546 F8W1H4 67 aa15.83■□□□□ 0.12
CBX4-203ENST00000494546 ETDBQ3ZM63 59 aa15.79■□□□□ 0.12
CBX4-203ENST00000494546 C4orf26Q17RF5 130 aa15.78■□□□□ 0.12
CBX4-203ENST00000494546 KRTAP19-1Q8IUB9 90 aa15.7■□□□□ 0.1
CBX4-203ENST00000494546 KRTAP9-1A8MXZ3 250 aaPredicted RBP15.64■□□□□ 0.09
CBX4-203ENST00000494546 TP53AIP1Q9HCN2 124 aa15.6■□□□□ 0.09
CBX4-203ENST00000494546 KRTAP3-1Q9BYR8 98 aa15.51■□□□□ 0.07
CBX4-203ENST00000494546 FCGBPQ9Y6R7 5405 aaPredicted RBP15.49■□□□□ 0.07
CBX4-203ENST00000494546 C1orf64Q8NEQ6 169 aa15.48■□□□□ 0.07
CBX4-203ENST00000494546 C5orf47Q569G3 176 aa15.47■□□□□ 0.07
CBX4-203ENST00000494546 KRTAP9-7A8MTY7 169 aa15.44■□□□□ 0.06
CBX4-203ENST00000494546 S4R3F8 94 aa15.43■□□□□ 0.06
CBX4-203ENST00000494546 ACYP1P07311 99 aa15.42■□□□□ 0.06
CBX4-203ENST00000494546 KRTAP19-6Q3LI70 58 aa15.39■□□□□ 0.05
CBX4-203ENST00000494546 FAM240AA0A1B0GVK7 77 aa15.33■□□□□ 0.04
CBX4-203ENST00000494546 LCA10Q71F78 164 aa15.31■□□□□ 0.04
CBX4-203ENST00000494546 CYP4F30PQ9H0H9 118 aa15.31■□□□□ 0.04
CBX4-203ENST00000494546 ATP5EP2Q5VTU8 51 aa15.3■□□□□ 0.04
CBX4-203ENST00000494546 CSAG1Q6PB30 78 aa15.3■□□□□ 0.04
CBX4-203ENST00000494546 FAM236AA0A1B0GUQ0 79 aa15.29■□□□□ 0.04
CBX4-203ENST00000494546 FAM236BA0A1B0GV22 79 aa15.29■□□□□ 0.04
CBX4-203ENST00000494546 TRAV22A0A0B4J277 110 aa15.28■□□□□ 0.04
CBX4-203ENST00000494546 HIST1H4AP62805 103 aaKnown RBP15.27■□□□□ 0.04
CBX4-203ENST00000494546 LOC101927531A0A1B0GV80 90 aa15.2■□□□□ 0.02
CBX4-203ENST00000494546 UQCRQO14949 82 aa15.12■□□□□ 0.01
CBX4-203ENST00000494546 H0Y9P7 68 aa15.07■□□□□ 0
CBX4-203ENST00000494546 KRTAP3-3Q9BYR6 98 aa15.07■□□□□ 0
CBX4-203ENST00000494546 A0A087WVE0 104 aa15.06■□□□□ 0
CBX4-203ENST00000494546 LINC00643Q86TS7 51 aa15.06■□□□□ 0
CBX4-203ENST00000494546 ATOX1O00244 68 aa15.03■□□□□ -0
CBX4-203ENST00000494546 A0A1B0GV90 55 aa15□□□□□ -0.01
CBX4-203ENST00000494546 MACF1Q9UPN3 7388 aaKnown RBP14.96□□□□□ -0.01
CBX4-203ENST00000494546 SPRR2GQ9BYE4 73 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms