RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 DSCR10P59022 87 aa6.72□□□□□ -1.33
TRA2A-209ENST00000494255 NREPQ16612 68 aa6.72□□□□□ -1.33
TRA2A-209ENST00000494255 PCOTHQ58A44 107 aa6.72□□□□□ -1.33
TRA2A-209ENST00000494255 F8W1H4 67 aa6.71□□□□□ -1.33
TRA2A-209ENST00000494255 LINC00313P59037 77 aa6.71□□□□□ -1.33
TRA2A-209ENST00000494255 RNF213Q63HN8 5207 aa6.71□□□□□ -1.34
TRA2A-209ENST00000494255 IGHV6-1A0A0B4J1U7 121 aa6.71□□□□□ -1.34
TRA2A-209ENST00000494255 A0A0U1RQV1 116 aa6.7□□□□□ -1.34
TRA2A-209ENST00000494255 A0A1B0GVX0 72 aa6.69□□□□□ -1.34
TRA2A-209ENST00000494255 NDUFB1O75438 58 aa6.69□□□□□ -1.34
TRA2A-209ENST00000494255 Q75L30 129 aa6.69□□□□□ -1.34
TRA2A-209ENST00000494255 MUC17Q685J3 4493 aa6.68□□□□□ -1.34
TRA2A-209ENST00000494255 C8orf87E5RJ46 101 aa6.68□□□□□ -1.34
TRA2A-209ENST00000494255 ATP11AUNQ6ZP68 121 aa6.67□□□□□ -1.34
TRA2A-209ENST00000494255 A8MWP4 228 aa6.65□□□□□ -1.34
TRA2A-209ENST00000494255 ETDBQ3ZM63 59 aa6.65□□□□□ -1.34
TRA2A-209ENST00000494255 NOTCH2NLQ7Z3S9 236 aa6.65□□□□□ -1.34
TRA2A-209ENST00000494255 C20orf166-AS1Q96NR2 134 aa6.65□□□□□ -1.34
TRA2A-209ENST00000494255 A8MUU9 505 aa6.65□□□□□ -1.35
TRA2A-209ENST00000494255 KRTAP4-1Q9BYQ7 146 aa6.65□□□□□ -1.35
TRA2A-209ENST00000494255 KRTAP16-1A8MUX0 517 aa6.62□□□□□ -1.35
TRA2A-209ENST00000494255 IGKV3D-7A0A0C4DH55 119 aa6.61□□□□□ -1.35
TRA2A-209ENST00000494255 BPY2O14599 106 aa6.61□□□□□ -1.35
TRA2A-209ENST00000494255 Q6ZVQ6 151 aa6.61□□□□□ -1.35
TRA2A-209ENST00000494255 UBL5Q9BZL1 73 aa6.61□□□□□ -1.35
TRA2A-209ENST00000494255 PRR15Q8IV56 129 aa6.6□□□□□ -1.35
TRA2A-209ENST00000494255 C8orf17Q9NRJ1 99 aa6.6□□□□□ -1.35
TRA2A-209ENST00000494255 LINC00846Q9NV44 126 aa6.59□□□□□ -1.35
TRA2A-209ENST00000494255 A0A1B0GV90 55 aa6.58□□□□□ -1.36
TRA2A-209ENST00000494255 K7EQZ3 153 aa6.56□□□□□ -1.36
TRA2A-209ENST00000494255 MUC2Q02817 5179 aa6.56□□□□□ -1.36
TRA2A-209ENST00000494255 MMP24-AS1A0A0U1RRL7 71 aa6.53□□□□□ -1.36
TRA2A-209ENST00000494255 Q8N9P0 234 aaPredicted RBP6.52□□□□□ -1.37
TRA2A-209ENST00000494255 TMEM254Q8TBM7 123 aa6.52□□□□□ -1.37
TRA2A-209ENST00000494255 hDV103S1A0JD37 113 aa6.51□□□□□ -1.37
TRA2A-209ENST00000494255 ACYP1P07311 99 aa6.51□□□□□ -1.37
TRA2A-209ENST00000494255 Q8N9L7 120 aa6.51□□□□□ -1.37
TRA2A-209ENST00000494255 MRPL34Q9BQ48 92 aaKnown RBP6.5□□□□□ -1.37
TRA2A-209ENST00000494255 ZCCHC13Q8WW36 166 aaKnown RBP6.49□□□□□ -1.37
TRA2A-209ENST00000494255 FAM240AA0A1B0GVK7 77 aa6.47□□□□□ -1.37
TRA2A-209ENST00000494255 NDUFS5O43920 106 aa6.47□□□□□ -1.37
TRA2A-209ENST00000494255 CASC2Q6XLA1 102 aa6.47□□□□□ -1.37
TRA2A-209ENST00000494255 CXCL6P80162 114 aa6.46□□□□□ -1.37
TRA2A-209ENST00000494255 COX6B2Q6YFQ2 88 aa6.46□□□□□ -1.37
TRA2A-209ENST00000494255 WFDC13Q8IUB5 93 aa6.46□□□□□ -1.37
TRA2A-209ENST00000494255 KRTAP19-2Q3LHN2 52 aa6.44□□□□□ -1.38
TRA2A-209ENST00000494255 HCG22E2RYF7 251 aa6.43□□□□□ -1.38
TRA2A-209ENST00000494255 LCE2CQ5TA81 110 aa6.42□□□□□ -1.38
TRA2A-209ENST00000494255 FAT4Q6V0I7 4981 aa6.4□□□□□ -1.38
TRA2A-209ENST00000494255 ATP5EP2Q5VTU8 51 aa6.4□□□□□ -1.38
TRA2A-209ENST00000494255 J3QR89 54 aa6.39□□□□□ -1.39
TRA2A-209ENST00000494255 SPINK7P58062 85 aa6.39□□□□□ -1.39
TRA2A-209ENST00000494255 RBM12B-AS1Q9P1G2 102 aa6.37□□□□□ -1.39
TRA2A-209ENST00000494255 FAM236DA0A1B0GTK5 79 aa6.36□□□□□ -1.39
TRA2A-209ENST00000494255 FAM236CP0DP71 79 aa6.36□□□□□ -1.39
TRA2A-209ENST00000494255 HRES1P13985 223 aa6.36□□□□□ -1.39
TRA2A-209ENST00000494255 MT1HP80294 61 aa6.35□□□□□ -1.39
TRA2A-209ENST00000494255 LINC00643Q86TS7 51 aa6.35□□□□□ -1.39
TRA2A-209ENST00000494255 LORP23490 312 aaPredicted RBP6.33□□□□□ -1.4
TRA2A-209ENST00000494255 HIST1H4AP62805 103 aaKnown RBP6.33□□□□□ -1.4
TRA2A-209ENST00000494255 Q5W150 140 aa6.33□□□□□ -1.4
TRA2A-209ENST00000494255 MPLKIPQ8TAP9 179 aa6.32□□□□□ -1.4
TRA2A-209ENST00000494255 M0R2T5 61 aa6.31□□□□□ -1.4
TRA2A-209ENST00000494255 SVIPQ8NHG7 77 aa6.31□□□□□ -1.4
TRA2A-209ENST00000494255 TP53AIP1Q9HCN2 124 aa6.31□□□□□ -1.4
TRA2A-209ENST00000494255 IGKV2D-30A0A075B6S6 120 aa6.3□□□□□ -1.4
TRA2A-209ENST00000494255 IGKV2-30P06310 120 aa6.3□□□□□ -1.4
TRA2A-209ENST00000494255 C7orf65Q6ZTY9 151 aa6.29□□□□□ -1.4
TRA2A-209ENST00000494255 A0A087WVE0 104 aa6.23□□□□□ -1.41
TRA2A-209ENST00000494255 K7ERU9 68 aa6.23□□□□□ -1.41
TRA2A-209ENST00000494255 KRTAP4-8Q9BYQ9 185 aa6.2□□□□□ -1.42
TRA2A-209ENST00000494255 TRAV22A0A0B4J277 110 aa6.2□□□□□ -1.42
TRA2A-209ENST00000494255 KRTAP10-6P60371 365 aaPredicted RBP6.2□□□□□ -1.42
TRA2A-209ENST00000494255 UQCRQO14949 82 aa6.19□□□□□ -1.42
TRA2A-209ENST00000494255 FLGP20930 4061 aaPredicted RBP6.18□□□□□ -1.42
TRA2A-209ENST00000494255 C4orf26Q17RF5 130 aa6.15□□□□□ -1.42
TRA2A-209ENST00000494255 H1FX-AS1Q4G0G2 97 aa6.14□□□□□ -1.43
TRA2A-209ENST00000494255 LOC101927531A0A1B0GV80 90 aa6.14□□□□□ -1.43
TRA2A-209ENST00000494255 H0Y9P7 68 aa6.14□□□□□ -1.43
TRA2A-209ENST00000494255 ATOX1O00244 68 aa6.14□□□□□ -1.43
TRA2A-209ENST00000494255 IMUPQ9GZP8 106 aa6.12□□□□□ -1.43
TRA2A-209ENST00000494255 CYP4F30PQ9H0H9 118 aa6.12□□□□□ -1.43
TRA2A-209ENST00000494255 SCGB1A1P11684 91 aa6.11□□□□□ -1.43
TRA2A-209ENST00000494255 MT-ATP8P03928 68 aa6.1□□□□□ -1.43
TRA2A-209ENST00000494255 OCR1Q9BZK8 76 aa6.1□□□□□ -1.43
TRA2A-209ENST00000494255 MP68P56378 58 aa6.08□□□□□ -1.44
TRA2A-209ENST00000494255 KRTAP9-2Q9BYQ4 174 aa6.08□□□□□ -1.44
TRA2A-209ENST00000494255 C1orf64Q8NEQ6 169 aa6.07□□□□□ -1.44
TRA2A-209ENST00000494255 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.07□□□□□ -1.44
TRA2A-209ENST00000494255 LINC00208Q96KT6 92 aa6.06□□□□□ -1.44
TRA2A-209ENST00000494255 C5orf47Q569G3 176 aa6.05□□□□□ -1.44
TRA2A-209ENST00000494255 KRTAP9-6A0A140TA67 174 aa6.03□□□□□ -1.44
TRA2A-209ENST00000494255 KRTAP9-8Q9BYQ0 159 aa6.03□□□□□ -1.44
TRA2A-209ENST00000494255 KRTAP3-1Q9BYR8 98 aa6.02□□□□□ -1.45
TRA2A-209ENST00000494255 FAM236AA0A1B0GUQ0 79 aa6.01□□□□□ -1.45
TRA2A-209ENST00000494255 FAM236BA0A1B0GV22 79 aa6.01□□□□□ -1.45
TRA2A-209ENST00000494255 H3BPC8 53 aa6.01□□□□□ -1.45
TRA2A-209ENST00000494255 SMIM20Q8N5G0 67 aa6□□□□□ -1.45
TRA2A-209ENST00000494255 S4R3F8 94 aa6□□□□□ -1.45
TRA2A-209ENST00000494255 MT2AP02795 61 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 165.6 ms