RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 hDV103S1A0JD37 113 aa6.69□□□□□ -1.34
PDLIM1-205ENST00000493949 KRTAP19-4Q3LI73 84 aa6.69□□□□□ -1.34
PDLIM1-205ENST00000493949 LCE5AQ5TCM9 118 aa6.69□□□□□ -1.34
PDLIM1-205ENST00000493949 IGLV8-61A0A075B6I0 122 aa6.68□□□□□ -1.34
PDLIM1-205ENST00000493949 A0A1W2PNM2 257 aa6.68□□□□□ -1.34
PDLIM1-205ENST00000493949 SMIM29Q86T20 159 aa6.68□□□□□ -1.34
PDLIM1-205ENST00000493949 IGKV2D-24A0A075B6R9 120 aa6.67□□□□□ -1.34
PDLIM1-205ENST00000493949 HCG22E2RYF7 251 aa6.66□□□□□ -1.34
PDLIM1-205ENST00000493949 SPANXA2-OT1Q8N9U9 137 aa6.66□□□□□ -1.34
PDLIM1-205ENST00000493949 HIGD2AQ9BW72 106 aa6.66□□□□□ -1.34
PDLIM1-205ENST00000493949 PKIGQ9Y2B9 76 aa6.66□□□□□ -1.34
PDLIM1-205ENST00000493949 LRCOL1A6NCL2 159 aa6.65□□□□□ -1.34
PDLIM1-205ENST00000493949 MT1HL1P0DM35 61 aa6.65□□□□□ -1.34
PDLIM1-205ENST00000493949 Q8N9L7 120 aa6.65□□□□□ -1.34
PDLIM1-205ENST00000493949 Q9BRP9 147 aa6.65□□□□□ -1.34
PDLIM1-205ENST00000493949 MP68P56378 58 aa6.64□□□□□ -1.35
PDLIM1-205ENST00000493949 DSCR10P59022 87 aa6.64□□□□□ -1.35
PDLIM1-205ENST00000493949 MRPL55Q7Z7F7 128 aaKnown RBP6.64□□□□□ -1.35
PDLIM1-205ENST00000493949 PRR15Q8IV56 129 aa6.64□□□□□ -1.35
PDLIM1-205ENST00000493949 LINC00474Q9P2X8 69 aa6.64□□□□□ -1.35
PDLIM1-205ENST00000493949 DEFB105AQ8NG35 78 aa6.63□□□□□ -1.35
PDLIM1-205ENST00000493949 BRK1Q8WUW1 75 aa6.63□□□□□ -1.35
PDLIM1-205ENST00000493949 H3BS24 57 aa6.62□□□□□ -1.35
PDLIM1-205ENST00000493949 C1orf195Q5TG92 126 aa6.61□□□□□ -1.35
PDLIM1-205ENST00000493949 REG3GQ6UW15 175 aa6.61□□□□□ -1.35
PDLIM1-205ENST00000493949 H0Y9J4 135 aa6.6□□□□□ -1.35
PDLIM1-205ENST00000493949 FAM229BQ4G0N7 80 aa6.6□□□□□ -1.35
PDLIM1-205ENST00000493949 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.59□□□□□ -1.35
PDLIM1-205ENST00000493949 PSCAO43653 123 aa6.59□□□□□ -1.35
PDLIM1-205ENST00000493949 UBE2BP63146 152 aa6.59□□□□□ -1.35
PDLIM1-205ENST00000493949 C1orf64Q8NEQ6 169 aa6.59□□□□□ -1.35
PDLIM1-205ENST00000493949 K7EQZ3 153 aa6.58□□□□□ -1.36
PDLIM1-205ENST00000493949 SPRR1BP22528 89 aa6.58□□□□□ -1.36
PDLIM1-205ENST00000493949 FAT4Q6V0I7 4981 aa6.57□□□□□ -1.36
PDLIM1-205ENST00000493949 TRAV22A0A0B4J277 110 aa6.57□□□□□ -1.36
PDLIM1-205ENST00000493949 MPLKIPQ8TAP9 179 aa6.57□□□□□ -1.36
PDLIM1-205ENST00000493949 CNBPP62633 177 aaKnown RBP6.55□□□□□ -1.36
PDLIM1-205ENST00000493949 C14orf177Q52M58 125 aa6.55□□□□□ -1.36
PDLIM1-205ENST00000493949 IGFL1Q6UW32 110 aa6.55□□□□□ -1.36
PDLIM1-205ENST00000493949 LIMD2Q9BT23 127 aa6.55□□□□□ -1.36
PDLIM1-205ENST00000493949 ST20-AS1Q8NBB2 130 aa6.54□□□□□ -1.36
PDLIM1-205ENST00000493949 CIRBP-AS1Q8TBR5 109 aa6.53□□□□□ -1.36
PDLIM1-205ENST00000493949 A8MWP4 228 aa6.52□□□□□ -1.37
PDLIM1-205ENST00000493949 RPL37AP61513 92 aaKnown RBP6.52□□□□□ -1.37
PDLIM1-205ENST00000493949 KRTAP7-1Q8IUC3 87 aa6.52□□□□□ -1.37
PDLIM1-205ENST00000493949 KRTAP9-3Q9BYQ3 159 aa6.51□□□□□ -1.37
PDLIM1-205ENST00000493949 FAM168BA1KXE4 195 aa6.5□□□□□ -1.37
PDLIM1-205ENST00000493949 CASC2Q6XLA1 102 aa6.5□□□□□ -1.37
PDLIM1-205ENST00000493949 TP53AIP1Q9HCN2 124 aa6.5□□□□□ -1.37
PDLIM1-205ENST00000493949 H0Y9P7 68 aa6.49□□□□□ -1.37
PDLIM1-205ENST00000493949 LINC00208Q96KT6 92 aa6.49□□□□□ -1.37
PDLIM1-205ENST00000493949 A0A087WSZ3 146 aa6.48□□□□□ -1.37
PDLIM1-205ENST00000493949 UBE2AP49459 152 aa6.48□□□□□ -1.37
PDLIM1-205ENST00000493949 MOBPQ13875 183 aa6.47□□□□□ -1.37
PDLIM1-205ENST00000493949 KRTAP5-3Q6L8H2 238 aa6.47□□□□□ -1.37
PDLIM1-205ENST00000493949 C9orf163Q8N9P6 203 aa6.47□□□□□ -1.37
PDLIM1-205ENST00000493949 MUC2Q02817 5179 aa6.47□□□□□ -1.37
PDLIM1-205ENST00000493949 LPAP08519 4548 aa6.46□□□□□ -1.37
PDLIM1-205ENST00000493949 LINC00472Q9H8W2 130 aa6.46□□□□□ -1.38
PDLIM1-205ENST00000493949 PMAIP1Q13794 54 aa6.45□□□□□ -1.38
PDLIM1-205ENST00000493949 WFDC13Q8IUB5 93 aa6.44□□□□□ -1.38
PDLIM1-205ENST00000493949 IGLV7-46A0A075B6I9 117 aa6.43□□□□□ -1.38
PDLIM1-205ENST00000493949 LOC101927531A0A1B0GV80 90 aa6.43□□□□□ -1.38
PDLIM1-205ENST00000493949 Q75L30 129 aa6.43□□□□□ -1.38
PDLIM1-205ENST00000493949 A0A096LNI7 61 aa6.42□□□□□ -1.38
PDLIM1-205ENST00000493949 ASB16-AS1Q495Z4 193 aa6.42□□□□□ -1.38
PDLIM1-205ENST00000493949 Q8N9P0 234 aaPredicted RBP6.41□□□□□ -1.38
PDLIM1-205ENST00000493949 PRLHP81277 87 aa6.4□□□□□ -1.38
PDLIM1-205ENST00000493949 Q5VV11 94 aa6.4□□□□□ -1.38
PDLIM1-205ENST00000493949 MMP24-AS1A0A0U1RRL7 71 aa6.39□□□□□ -1.39
PDLIM1-205ENST00000493949 SEC61GP60059 68 aa6.39□□□□□ -1.39
PDLIM1-205ENST00000493949 PSPHP1O15172 72 aa6.38□□□□□ -1.39
PDLIM1-205ENST00000493949 ATP11AUNQ6ZP68 121 aa6.38□□□□□ -1.39
PDLIM1-205ENST00000493949 ZNF706Q9Y5V0 76 aaPredicted RBP6.38□□□□□ -1.39
PDLIM1-205ENST00000493949 A8MUN3 132 aa6.37□□□□□ -1.39
PDLIM1-205ENST00000493949 PANO1I0J062 215 aa6.37□□□□□ -1.39
PDLIM1-205ENST00000493949 A0A1W2PNN7 141 aa6.36□□□□□ -1.39
PDLIM1-205ENST00000493949 KRTAP10-8P60410 259 aa6.36□□□□□ -1.39
PDLIM1-205ENST00000493949 KRTAP13-1Q8IUC0 172 aa6.36□□□□□ -1.39
PDLIM1-205ENST00000493949 NDUFS5O43920 106 aa6.35□□□□□ -1.39
PDLIM1-205ENST00000493949 CD164Q04900 197 aa6.35□□□□□ -1.39
PDLIM1-205ENST00000493949 LINC00483Q53H64 154 aa6.35□□□□□ -1.39
PDLIM1-205ENST00000493949 COA5Q86WW8 74 aa6.35□□□□□ -1.39
PDLIM1-205ENST00000493949 LINC01558Q9Y6Z2 57 aa6.34□□□□□ -1.39
PDLIM1-205ENST00000493949 CHKB-CPT1BH3BT56 60 aa6.33□□□□□ -1.4
PDLIM1-205ENST00000493949 PRR15LQ9BU68 103 aa6.33□□□□□ -1.4
PDLIM1-205ENST00000493949 IGKV2-24A0A0C4DH68 120 aa6.32□□□□□ -1.4
PDLIM1-205ENST00000493949 PRR4Q16378 134 aa6.32□□□□□ -1.4
PDLIM1-205ENST00000493949 KTN1-AS1Q86SY8 53 aa6.32□□□□□ -1.4
PDLIM1-205ENST00000493949 CDC42SE1Q9NRR8 79 aa6.32□□□□□ -1.4
PDLIM1-205ENST00000493949 PLAC8Q9NZF1 115 aa6.32□□□□□ -1.4
PDLIM1-205ENST00000493949 DEFB116Q30KQ4 102 aa6.31□□□□□ -1.4
PDLIM1-205ENST00000493949 C8orf17Q9NRJ1 99 aa6.31□□□□□ -1.4
PDLIM1-205ENST00000493949 A0A1B0GVX0 72 aa6.3□□□□□ -1.4
PDLIM1-205ENST00000493949 PHF5AQ7RTV0 110 aaKnown RBP6.29□□□□□ -1.4
PDLIM1-205ENST00000493949 Q96NJ1 140 aa6.29□□□□□ -1.4
PDLIM1-205ENST00000493949 MRPL34Q9BQ48 92 aaKnown RBP6.28□□□□□ -1.4
PDLIM1-205ENST00000493949 A6NED7 52 aa6.27□□□□□ -1.41
PDLIM1-205ENST00000493949 CRCT1Q9UGL9 99 aa6.27□□□□□ -1.41
PDLIM1-205ENST00000493949 FSIP2Q5CZC0 6907 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms