RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 KRTAP9-7A8MTY7 169 aa8.24□□□□□ -1.09
PTPRU-208ENST00000493601 MT1FP04733 61 aa8.24□□□□□ -1.09
PTPRU-208ENST00000493601 RBM3P98179 157 aaKnown RBP8.22□□□□□ -1.09
PTPRU-208ENST00000493601 MTURNQ8N3F0 131 aa8.22□□□□□ -1.09
PTPRU-208ENST00000493601 DSCR8Q96T75 97 aa8.22□□□□□ -1.09
PTPRU-208ENST00000493601 KRTAP10-10P60014 251 aa8.21□□□□□ -1.1
PTPRU-208ENST00000493601 PYY3Q5JQD4 70 aa8.21□□□□□ -1.1
PTPRU-208ENST00000493601 J3KT08 172 aa8.2□□□□□ -1.1
PTPRU-208ENST00000493601 C21orf62-AS1Q17RA5 79 aa8.2□□□□□ -1.1
PTPRU-208ENST00000493601 ZCCHC13Q8WW36 166 aaKnown RBP8.19□□□□□ -1.1
PTPRU-208ENST00000493601 SCGB1C2P0DMR2 95 aa8.18□□□□□ -1.1
PTPRU-208ENST00000493601 LCE2BO14633 110 aa8.17□□□□□ -1.1
PTPRU-208ENST00000493601 KRTAP9-3Q9BYQ3 159 aa8.17□□□□□ -1.1
PTPRU-208ENST00000493601 UQCR10Q9UDW1 63 aa8.17□□□□□ -1.1
PTPRU-208ENST00000493601 C9JAW5 83 aa8.15□□□□□ -1.1
PTPRU-208ENST00000493601 SPINK7P58062 85 aa8.14□□□□□ -1.11
PTPRU-208ENST00000493601 LOC105371267A0A1B0GV96 52 aa8.13□□□□□ -1.11
PTPRU-208ENST00000493601 NDUFB1O75438 58 aa8.13□□□□□ -1.11
PTPRU-208ENST00000493601 KRTAP19-1Q8IUB9 90 aa8.13□□□□□ -1.11
PTPRU-208ENST00000493601 BAALC-AS2P0C853 105 aa8.12□□□□□ -1.11
PTPRU-208ENST00000493601 Q6ZQT0 140 aa8.12□□□□□ -1.11
PTPRU-208ENST00000493601 Q8N9P0 234 aaPredicted RBP8.11□□□□□ -1.11
PTPRU-208ENST00000493601 FCGBPQ9Y6R7 5405 aaPredicted RBP8.1□□□□□ -1.11
PTPRU-208ENST00000493601 SMIM6P0DI80 62 aa8.1□□□□□ -1.11
PTPRU-208ENST00000493601 A8MWP4 228 aa8.07□□□□□ -1.12
PTPRU-208ENST00000493601 LYRM7Q5U5X0 104 aa8.07□□□□□ -1.12
PTPRU-208ENST00000493601 A0A1B0GW54 56 aa8.06□□□□□ -1.12
PTPRU-208ENST00000493601 WFDC13Q8IUB5 93 aa8.06□□□□□ -1.12
PTPRU-208ENST00000493601 C8orf17Q9NRJ1 99 aa8.06□□□□□ -1.12
PTPRU-208ENST00000493601 JMJD7-PLA2G4BH0Y9G9 81 aa8.05□□□□□ -1.12
PTPRU-208ENST00000493601 LOC110117498A0A087WWA1 95 aa8.03□□□□□ -1.12
PTPRU-208ENST00000493601 ATXN8Q156A1 80 aa8.03□□□□□ -1.12
PTPRU-208ENST00000493601 IGKV3D-7A0A0C4DH55 119 aa8.01□□□□□ -1.13
PTPRU-208ENST00000493601 PDE6GP18545 87 aa8.01□□□□□ -1.13
PTPRU-208ENST00000493601 LINC00846Q9NV44 126 aa8.01□□□□□ -1.13
PTPRU-208ENST00000493601 Q6ZVQ6 151 aa8□□□□□ -1.13
PTPRU-208ENST00000493601 M0R143 59 aa7.97□□□□□ -1.13
PTPRU-208ENST00000493601 PRR15Q8IV56 129 aa7.96□□□□□ -1.14
PTPRU-208ENST00000493601 C14orf132Q9NPU4 83 aa7.96□□□□□ -1.14
PTPRU-208ENST00000493601 NAA38Q9BRA0 125 aaKnown RBP7.95□□□□□ -1.14
PTPRU-208ENST00000493601 KRTAP19-6Q3LI70 58 aa7.94□□□□□ -1.14
PTPRU-208ENST00000493601 NREPQ16612 68 aa7.93□□□□□ -1.14
PTPRU-208ENST00000493601 TMEM254Q8TBM7 123 aa7.93□□□□□ -1.14
PTPRU-208ENST00000493601 MMP24-AS1A0A0U1RRL7 71 aa7.91□□□□□ -1.14
PTPRU-208ENST00000493601 MRPL34Q9BQ48 92 aaKnown RBP7.91□□□□□ -1.14
PTPRU-208ENST00000493601 TSTD3H0UI37 97 aa7.89□□□□□ -1.15
PTPRU-208ENST00000493601 H1FX-AS1Q4G0G2 97 aa7.89□□□□□ -1.15
PTPRU-208ENST00000493601 MACF1Q9UPN3 7388 aaKnown RBP7.87□□□□□ -1.15
PTPRU-208ENST00000493601 hDV103S1A0JD37 113 aa7.87□□□□□ -1.15
PTPRU-208ENST00000493601 NDUFS5O43920 106 aa7.86□□□□□ -1.15
PTPRU-208ENST00000493601 K7EQZ3 153 aa7.84□□□□□ -1.15
PTPRU-208ENST00000493601 IGKV2D-30A0A075B6S6 120 aa7.8□□□□□ -1.16
PTPRU-208ENST00000493601 IGKV2-30P06310 120 aa7.8□□□□□ -1.16
PTPRU-208ENST00000493601 C7orf65Q6ZTY9 151 aa7.8□□□□□ -1.16
PTPRU-208ENST00000493601 H3BT86 120 aa7.77□□□□□ -1.17
PTPRU-208ENST00000493601 BPY2O14599 106 aa7.77□□□□□ -1.17
PTPRU-208ENST00000493601 SYNE2Q8WXH0 6885 aaKnown RBP7.76□□□□□ -1.17
PTPRU-208ENST00000493601 BATFQ16520 125 aa7.74□□□□□ -1.17
PTPRU-208ENST00000493601 Q5W150 140 aa7.74□□□□□ -1.17
PTPRU-208ENST00000493601 CASC2Q6XLA1 102 aa7.71□□□□□ -1.18
PTPRU-208ENST00000493601 C9orf118A6NHY6 69 aa7.69□□□□□ -1.18
PTPRU-208ENST00000493601 HCG22E2RYF7 251 aa7.69□□□□□ -1.18
PTPRU-208ENST00000493601 C4orf26Q17RF5 130 aa7.68□□□□□ -1.18
PTPRU-208ENST00000493601 KRTAP6-3Q3LI67 103 aa7.68□□□□□ -1.18
PTPRU-208ENST00000493601 Q8N9L7 120 aa7.68□□□□□ -1.18
PTPRU-208ENST00000493601 A0A1W2PPM0 123 aa7.67□□□□□ -1.18
PTPRU-208ENST00000493601 CXCL6P80162 114 aa7.67□□□□□ -1.18
PTPRU-208ENST00000493601 TAX1BP3O14907 124 aa7.63□□□□□ -1.19
PTPRU-208ENST00000493601 FAM236AA0A1B0GUQ0 79 aa7.61□□□□□ -1.19
PTPRU-208ENST00000493601 FAM236BA0A1B0GV22 79 aa7.61□□□□□ -1.19
PTPRU-208ENST00000493601 C5orf47Q569G3 176 aa7.61□□□□□ -1.19
PTPRU-208ENST00000493601 PCP4L1A6NKN8 68 aa7.59□□□□□ -1.19
PTPRU-208ENST00000493601 COL5A1-AS1Q5SY13 56 aa7.59□□□□□ -1.19
PTPRU-208ENST00000493601 S4R3F8 94 aa7.57□□□□□ -1.2
PTPRU-208ENST00000493601 UBL5Q9BZL1 73 aa7.55□□□□□ -1.2
PTPRU-208ENST00000493601 SPCS1Q9Y6A9 102 aa7.55□□□□□ -1.2
PTPRU-208ENST00000493601 CSAG1Q6PB30 78 aa7.53□□□□□ -1.2
PTPRU-208ENST00000493601 KRTAP3-1Q9BYR8 98 aa7.53□□□□□ -1.2
PTPRU-208ENST00000493601 A6NN06 94 aa7.52□□□□□ -1.21
PTPRU-208ENST00000493601 Q5VV11 94 aa7.52□□□□□ -1.21
PTPRU-208ENST00000493601 C1orf64Q8NEQ6 169 aa7.52□□□□□ -1.21
PTPRU-208ENST00000493601 SMCPP49901 116 aaPredicted RBP7.5□□□□□ -1.21
PTPRU-208ENST00000493601 LCA10Q71F78 164 aa7.5□□□□□ -1.21
PTPRU-208ENST00000493601 MT1BP07438 61 aa7.49□□□□□ -1.21
PTPRU-208ENST00000493601 SPRR2GQ9BYE4 73 aa7.49□□□□□ -1.21
PTPRU-208ENST00000493601 KRTAP19-8Q3LI54 63 aa7.46□□□□□ -1.22
PTPRU-208ENST00000493601 TP53AIP1Q9HCN2 124 aa7.46□□□□□ -1.22
PTPRU-208ENST00000493601 K7EP34 96 aa7.42□□□□□ -1.22
PTPRU-208ENST00000493601 PRO0461Q9UI25 63 aa7.42□□□□□ -1.22
PTPRU-208ENST00000493601 KLKP1Q107X0 134 aa7.41□□□□□ -1.22
PTPRU-208ENST00000493601 KRTAP10-5P60370 271 aa7.39□□□□□ -1.23
PTPRU-208ENST00000493601 GTF2H5Q6ZYL4 71 aa7.37□□□□□ -1.23
PTPRU-208ENST00000493601 KRTAP3-3Q9BYR6 98 aa7.34□□□□□ -1.23
PTPRU-208ENST00000493601 CYP4F30PQ9H0H9 118 aa7.32□□□□□ -1.24
PTPRU-208ENST00000493601 CRIPTQ9P021 101 aa7.32□□□□□ -1.24
PTPRU-208ENST00000493601 NEBP20929 6669 aa7.32□□□□□ -1.24
PTPRU-208ENST00000493601 MUC12Q9UKN1 5478 aa7.3□□□□□ -1.24
PTPRU-208ENST00000493601 F8W1H4 67 aa7.3□□□□□ -1.24
PTPRU-208ENST00000493601 TRAV22A0A0B4J277 110 aa7.28□□□□□ -1.24
PTPRU-208ENST00000493601 IMUPQ9GZP8 106 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms