RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 KRTAP20-1Q3LI63 56 aa8.25□□□□□ -1.09
NUP50-218ENST00000493456 HIGD1BQ9P298 99 aa8.25□□□□□ -1.09
NUP50-218ENST00000493456 PRO1854Q9UHT4 67 aa8.25□□□□□ -1.09
NUP50-218ENST00000493456 J3KT08 172 aa8.24□□□□□ -1.09
NUP50-218ENST00000493456 TMEM238LA0A1B0GVL6 79 aa8.21□□□□□ -1.1
NUP50-218ENST00000493456 A6NJY4 79 aa8.21□□□□□ -1.1
NUP50-218ENST00000493456 LYRM7Q5U5X0 104 aa8.21□□□□□ -1.1
NUP50-218ENST00000493456 H1FX-AS1Q4G0G2 97 aa8.2□□□□□ -1.1
NUP50-218ENST00000493456 VPS25Q9BRG1 176 aa8.2□□□□□ -1.1
NUP50-218ENST00000493456 UBE2V1Q13404 147 aa8.19□□□□□ -1.1
NUP50-218ENST00000493456 CEND1Q8N111 149 aa8.19□□□□□ -1.1
NUP50-218ENST00000493456 NDUFB1O75438 58 aa8.18□□□□□ -1.1
NUP50-218ENST00000493456 C21orf62-AS1Q17RA5 79 aa8.18□□□□□ -1.1
NUP50-218ENST00000493456 C14orf144Q96I85 54 aa8.18□□□□□ -1.1
NUP50-218ENST00000493456 DSCR8Q96T75 97 aa8.18□□□□□ -1.1
NUP50-218ENST00000493456 A6NN06 94 aa8.17□□□□□ -1.1
NUP50-218ENST00000493456 MDN1Q9NU22 5596 aa8.16□□□□□ -1.1
NUP50-218ENST00000493456 C2orf91Q6ZV80 131 aa8.15□□□□□ -1.1
NUP50-218ENST00000493456 IGKV3D-7A0A0C4DH55 119 aa8.13□□□□□ -1.11
NUP50-218ENST00000493456 RBM3P98179 157 aaKnown RBP8.13□□□□□ -1.11
NUP50-218ENST00000493456 C8orf17Q9NRJ1 99 aa8.13□□□□□ -1.11
NUP50-218ENST00000493456 PSMB2P49721 201 aa8.12□□□□□ -1.11
NUP50-218ENST00000493456 FXYD2P54710 66 aa8.12□□□□□ -1.11
NUP50-218ENST00000493456 S100A6P06703 90 aa8.11□□□□□ -1.11
NUP50-218ENST00000493456 COX6CP09669 75 aa8.11□□□□□ -1.11
NUP50-218ENST00000493456 PAM16Q9Y3D7 125 aa8.1□□□□□ -1.11
NUP50-218ENST00000493456 KMT2DO14686 5537 aa8.09□□□□□ -1.11
NUP50-218ENST00000493456 SPATA45Q537H7 98 aa8.09□□□□□ -1.11
NUP50-218ENST00000493456 Q6ZQT0 140 aa8.09□□□□□ -1.11
NUP50-218ENST00000493456 Q6ZVQ6 151 aa8.08□□□□□ -1.12
NUP50-218ENST00000493456 KRTAP5-9P26371 169 aa8.06□□□□□ -1.12
NUP50-218ENST00000493456 C9JAW5 83 aa8.05□□□□□ -1.12
NUP50-218ENST00000493456 MT1BP07438 61 aa8.04□□□□□ -1.12
NUP50-218ENST00000493456 Q5VV11 94 aa8.03□□□□□ -1.12
NUP50-218ENST00000493456 VAMP8Q9BV40 100 aa8.03□□□□□ -1.12
NUP50-218ENST00000493456 K7ERJ3 54 aa8□□□□□ -1.13
NUP50-218ENST00000493456 FAM236AA0A1B0GUQ0 79 aa7.98□□□□□ -1.13
NUP50-218ENST00000493456 FAM236BA0A1B0GV22 79 aa7.98□□□□□ -1.13
NUP50-218ENST00000493456 A0A1B0GW54 56 aa7.98□□□□□ -1.13
NUP50-218ENST00000493456 KRTAP10-5P60370 271 aa7.98□□□□□ -1.13
NUP50-218ENST00000493456 TMEM254Q8TBM7 123 aa7.98□□□□□ -1.13
NUP50-218ENST00000493456 MRPL34Q9BQ48 92 aaKnown RBP7.98□□□□□ -1.13
NUP50-218ENST00000493456 S100A1P23297 94 aa7.97□□□□□ -1.13
NUP50-218ENST00000493456 KRTAP19-8Q3LI54 63 aa7.97□□□□□ -1.13
NUP50-218ENST00000493456 PRR15Q8IV56 129 aa7.97□□□□□ -1.13
NUP50-218ENST00000493456 HSD52Q0P140 79 aa7.95□□□□□ -1.14
NUP50-218ENST00000493456 MMP24-AS1A0A0U1RRL7 71 aa7.94□□□□□ -1.14
NUP50-218ENST00000493456 C7orf65Q6ZTY9 151 aa7.94□□□□□ -1.14
NUP50-218ENST00000493456 SPRR2GQ9BYE4 73 aa7.94□□□□□ -1.14
NUP50-218ENST00000493456 IGKV2D-30A0A075B6S6 120 aa7.93□□□□□ -1.14
NUP50-218ENST00000493456 IGKV2-30P06310 120 aa7.93□□□□□ -1.14
NUP50-218ENST00000493456 KRTAP3-3Q9BYR6 98 aa7.93□□□□□ -1.14
NUP50-218ENST00000493456 KRTAP3-2Q9BYR7 98 aa7.93□□□□□ -1.14
NUP50-218ENST00000493456 BAALC-AS2P0C853 105 aa7.92□□□□□ -1.14
NUP50-218ENST00000493456 SCGB1C2P0DMR2 95 aa7.91□□□□□ -1.14
NUP50-218ENST00000493456 NDUFS5O43920 106 aa7.9□□□□□ -1.14
NUP50-218ENST00000493456 hDV103S1A0JD37 113 aa7.89□□□□□ -1.15
NUP50-218ENST00000493456 KRTAP2-3P0C7H8 128 aa7.89□□□□□ -1.15
NUP50-218ENST00000493456 C5orf47Q569G3 176 aa7.89□□□□□ -1.15
NUP50-218ENST00000493456 KRTAP2-4Q9BYR9 128 aa7.89□□□□□ -1.15
NUP50-218ENST00000493456 LOC110117498A0A087WWA1 95 aa7.88□□□□□ -1.15
NUP50-218ENST00000493456 JMJD7-PLA2G4BH0Y9G9 81 aa7.88□□□□□ -1.15
NUP50-218ENST00000493456 PDE6GP18545 87 aa7.86□□□□□ -1.15
NUP50-218ENST00000493456 NREPQ16612 68 aa7.84□□□□□ -1.15
NUP50-218ENST00000493456 C4orf26Q17RF5 130 aa7.84□□□□□ -1.15
NUP50-218ENST00000493456 Q5W150 140 aa7.82□□□□□ -1.16
NUP50-218ENST00000493456 K7EQZ3 153 aa7.8□□□□□ -1.16
NUP50-218ENST00000493456 CSAG1Q6PB30 78 aa7.79□□□□□ -1.16
NUP50-218ENST00000493456 S4R3F8 94 aa7.79□□□□□ -1.16
NUP50-218ENST00000493456 C14orf132Q9NPU4 83 aa7.77□□□□□ -1.17
NUP50-218ENST00000493456 ATXN8Q156A1 80 aa7.76□□□□□ -1.17
NUP50-218ENST00000493456 IMUPQ9GZP8 106 aa7.76□□□□□ -1.17
NUP50-218ENST00000493456 KLKP1Q107X0 134 aa7.75□□□□□ -1.17
NUP50-218ENST00000493456 LCA10Q71F78 164 aa7.71□□□□□ -1.18
NUP50-218ENST00000493456 KRTAP3-1Q9BYR8 98 aa7.7□□□□□ -1.18
NUP50-218ENST00000493456 SPRR2EP22531 72 aa7.69□□□□□ -1.18
NUP50-218ENST00000493456 SPRR2BP35325 72 aa7.69□□□□□ -1.18
NUP50-218ENST00000493456 SPRR2AP35326 72 aa7.69□□□□□ -1.18
NUP50-218ENST00000493456 SPRR2FQ96RM1 72 aa7.69□□□□□ -1.18
NUP50-218ENST00000493456 UQCR10Q9UDW1 63 aa7.69□□□□□ -1.18
NUP50-218ENST00000493456 HCG22E2RYF7 251 aa7.68□□□□□ -1.18
NUP50-218ENST00000493456 SMCPP49901 116 aaPredicted RBP7.66□□□□□ -1.18
NUP50-218ENST00000493456 CXCL6P80162 114 aa7.66□□□□□ -1.18
NUP50-218ENST00000493456 CASC2Q6XLA1 102 aa7.66□□□□□ -1.18
NUP50-218ENST00000493456 BPY2O14599 106 aa7.65□□□□□ -1.18
NUP50-218ENST00000493456 PYY3Q5JQD4 70 aa7.65□□□□□ -1.18
NUP50-218ENST00000493456 C1orf64Q8NEQ6 169 aa7.64□□□□□ -1.19
NUP50-218ENST00000493456 CRIPTQ9P021 101 aa7.64□□□□□ -1.19
NUP50-218ENST00000493456 KRTAP2-2Q9BYT5 123 aa7.62□□□□□ -1.19
NUP50-218ENST00000493456 KRTAP2-1Q9BYU5 128 aa7.62□□□□□ -1.19
NUP50-218ENST00000493456 NAA38Q9BRA0 125 aaKnown RBP7.57□□□□□ -1.2
NUP50-218ENST00000493456 Q8N9L7 120 aa7.56□□□□□ -1.2
NUP50-218ENST00000493456 LCE1AQ5T7P2 110 aa7.52□□□□□ -1.21
NUP50-218ENST00000493456 PRO2289Q9P1D8 64 aa7.52□□□□□ -1.21
NUP50-218ENST00000493456 KRTAP8-1Q8IUC2 63 aa7.5□□□□□ -1.21
NUP50-218ENST00000493456 M0R143 59 aa7.48□□□□□ -1.21
NUP50-218ENST00000493456 SPRR2DP22532 72 aa7.45□□□□□ -1.22
NUP50-218ENST00000493456 H3BT86 120 aa7.44□□□□□ -1.22
NUP50-218ENST00000493456 MT1XP80297 61 aa7.42□□□□□ -1.22
NUP50-218ENST00000493456 TSTD3H0UI37 97 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms