RNA–Protein interactions for RNA: ENST00000492545.1

CTDSP1-211, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-211ENST00000492545 SMIM6P0DI80 62 aa12.09□□□□□ -0.47
CTDSP1-211ENST00000492545 A0A1B0GVX0 72 aa12.08□□□□□ -0.48
CTDSP1-211ENST00000492545 A0A1B0GW54 56 aa12.08□□□□□ -0.48
CTDSP1-211ENST00000492545 CRCT1Q9UGL9 99 aa12.08□□□□□ -0.48
CTDSP1-211ENST00000492545 Q6ZQT0 140 aa12.07□□□□□ -0.48
CTDSP1-211ENST00000492545 PDE6GP18545 87 aa12.04□□□□□ -0.48
CTDSP1-211ENST00000492545 LYRM7Q5U5X0 104 aa12.03□□□□□ -0.48
CTDSP1-211ENST00000492545 LOC110117498A0A087WWA1 95 aa12.01□□□□□ -0.49
CTDSP1-211ENST00000492545 NAA38Q9BRA0 125 aaKnown RBP12.01□□□□□ -0.49
CTDSP1-211ENST00000492545 NDUFB1O75438 58 aa11.99□□□□□ -0.49
CTDSP1-211ENST00000492545 TSTD3H0UI37 97 aa11.97□□□□□ -0.49
CTDSP1-211ENST00000492545 RBM12B-AS1Q9P1G2 102 aa11.97□□□□□ -0.49
CTDSP1-211ENST00000492545 FAM236DA0A1B0GTK5 79 aa11.93□□□□□ -0.5
CTDSP1-211ENST00000492545 FAM236CP0DP71 79 aa11.93□□□□□ -0.5
CTDSP1-211ENST00000492545 MPLKIPQ8TAP9 179 aa11.93□□□□□ -0.5
CTDSP1-211ENST00000492545 A8MWP4 228 aa11.91□□□□□ -0.5
CTDSP1-211ENST00000492545 HRES1P13985 223 aa11.91□□□□□ -0.5
CTDSP1-211ENST00000492545 ZCCHC13Q8WW36 166 aaKnown RBP11.9□□□□□ -0.5
CTDSP1-211ENST00000492545 Q8N9P0 234 aaPredicted RBP11.88□□□□□ -0.51
CTDSP1-211ENST00000492545 C14orf132Q9NPU4 83 aa11.88□□□□□ -0.51
CTDSP1-211ENST00000492545 BATFQ16520 125 aa11.86□□□□□ -0.51
CTDSP1-211ENST00000492545 KRTAP9-8Q9BYQ0 159 aa11.84□□□□□ -0.51
CTDSP1-211ENST00000492545 C8orf17Q9NRJ1 99 aa11.84□□□□□ -0.51
CTDSP1-211ENST00000492545 NREPQ16612 68 aa11.83□□□□□ -0.52
CTDSP1-211ENST00000492545 MTURNQ8N3F0 131 aa11.83□□□□□ -0.52
CTDSP1-211ENST00000492545 IGKV3D-7A0A0C4DH55 119 aa11.82□□□□□ -0.52
CTDSP1-211ENST00000492545 C9orf118A6NHY6 69 aa11.8□□□□□ -0.52
CTDSP1-211ENST00000492545 SPINK7P58062 85 aa11.8□□□□□ -0.52
CTDSP1-211ENST00000492545 H3BT86 120 aa11.79□□□□□ -0.52
CTDSP1-211ENST00000492545 PRR15Q8IV56 129 aa11.78□□□□□ -0.52
CTDSP1-211ENST00000492545 Q6ZVQ6 151 aa11.77□□□□□ -0.53
CTDSP1-211ENST00000492545 A0A1W2PPM0 123 aa11.74□□□□□ -0.53
CTDSP1-211ENST00000492545 TAX1BP3O14907 124 aa11.73□□□□□ -0.53
CTDSP1-211ENST00000492545 LOC105371267A0A1B0GV96 52 aa11.72□□□□□ -0.53
CTDSP1-211ENST00000492545 TMEM254Q8TBM7 123 aa11.68□□□□□ -0.54
CTDSP1-211ENST00000492545 MRPL34Q9BQ48 92 aaKnown RBP11.66□□□□□ -0.54
CTDSP1-211ENST00000492545 MMP24-AS1A0A0U1RRL7 71 aa11.64□□□□□ -0.55
CTDSP1-211ENST00000492545 MT2AP02795 61 aa11.64□□□□□ -0.55
CTDSP1-211ENST00000492545 hDV103S1A0JD37 113 aa11.61□□□□□ -0.55
CTDSP1-211ENST00000492545 BPY2O14599 106 aa11.61□□□□□ -0.55
CTDSP1-211ENST00000492545 WFDC13Q8IUB5 93 aa11.6□□□□□ -0.55
CTDSP1-211ENST00000492545 K7EQZ3 153 aa11.59□□□□□ -0.55
CTDSP1-211ENST00000492545 SPCS1Q9Y6A9 102 aa11.58□□□□□ -0.56
CTDSP1-211ENST00000492545 MT1FP04733 61 aa11.54□□□□□ -0.56
CTDSP1-211ENST00000492545 KRTAP10-10P60014 251 aa11.54□□□□□ -0.56
CTDSP1-211ENST00000492545 NDUFS5O43920 106 aa11.53□□□□□ -0.56
CTDSP1-211ENST00000492545 USH2AO75445 5202 aa11.51□□□□□ -0.57
CTDSP1-211ENST00000492545 COL5A1-AS1Q5SY13 56 aa11.48□□□□□ -0.57
CTDSP1-211ENST00000492545 KRTAP9-3Q9BYQ3 159 aa11.47□□□□□ -0.57
CTDSP1-211ENST00000492545 SMCPP49901 116 aaPredicted RBP11.46□□□□□ -0.57
CTDSP1-211ENST00000492545 CASC2Q6XLA1 102 aa11.43□□□□□ -0.58
CTDSP1-211ENST00000492545 SSPOA2VEC9 5147 aa11.41□□□□□ -0.58
CTDSP1-211ENST00000492545 H1FX-AS1Q4G0G2 97 aa11.4□□□□□ -0.58
CTDSP1-211ENST00000492545 UBL5Q9BZL1 73 aa11.4□□□□□ -0.58
CTDSP1-211ENST00000492545 C7orf65Q6ZTY9 151 aa11.39□□□□□ -0.59
CTDSP1-211ENST00000492545 Q8N9L7 120 aa11.39□□□□□ -0.59
CTDSP1-211ENST00000492545 LCE2BO14633 110 aa11.38□□□□□ -0.59
CTDSP1-211ENST00000492545 Q5W150 140 aa11.38□□□□□ -0.59
CTDSP1-211ENST00000492545 PRO0461Q9UI25 63 aa11.38□□□□□ -0.59
CTDSP1-211ENST00000492545 IGKV2D-30A0A075B6S6 120 aa11.37□□□□□ -0.59
CTDSP1-211ENST00000492545 K7EP34 96 aa11.37□□□□□ -0.59
CTDSP1-211ENST00000492545 IGKV2-30P06310 120 aa11.37□□□□□ -0.59
CTDSP1-211ENST00000492545 HCG22E2RYF7 251 aa11.35□□□□□ -0.59
CTDSP1-211ENST00000492545 CXCL6P80162 114 aa11.35□□□□□ -0.59
CTDSP1-211ENST00000492545 LINC00846Q9NV44 126 aa11.35□□□□□ -0.59
CTDSP1-211ENST00000492545 GTF2H5Q6ZYL4 71 aa11.27□□□□□ -0.61
CTDSP1-211ENST00000492545 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.23□□□□□ -0.61
CTDSP1-211ENST00000492545 F8W1H4 67 aa11.22□□□□□ -0.61
CTDSP1-211ENST00000492545 KRTAP19-1Q8IUB9 90 aa11.21□□□□□ -0.61
CTDSP1-211ENST00000492545 C4orf26Q17RF5 130 aa11.18□□□□□ -0.62
CTDSP1-211ENST00000492545 FCGBPQ9Y6R7 5405 aaPredicted RBP11.17□□□□□ -0.62
CTDSP1-211ENST00000492545 TP53AIP1Q9HCN2 124 aa11.14□□□□□ -0.63
CTDSP1-211ENST00000492545 ETDBQ3ZM63 59 aa11.11□□□□□ -0.63
CTDSP1-211ENST00000492545 KRTAP9-7A8MTY7 169 aa11.09□□□□□ -0.63
CTDSP1-211ENST00000492545 PCP4L1A6NKN8 68 aa11.05□□□□□ -0.64
CTDSP1-211ENST00000492545 KRTAP19-6Q3LI70 58 aa11.05□□□□□ -0.64
CTDSP1-211ENST00000492545 C1orf64Q8NEQ6 169 aa11□□□□□ -0.65
CTDSP1-211ENST00000492545 KRTAP3-1Q9BYR8 98 aa10.99□□□□□ -0.65
CTDSP1-211ENST00000492545 ACYP1P07311 99 aa10.97□□□□□ -0.65
CTDSP1-211ENST00000492545 C5orf47Q569G3 176 aa10.96□□□□□ -0.65
CTDSP1-211ENST00000492545 S4R3F8 94 aa10.96□□□□□ -0.65
CTDSP1-211ENST00000492545 CSAG1Q6PB30 78 aa10.94□□□□□ -0.66
CTDSP1-211ENST00000492545 FAM240AA0A1B0GVK7 77 aa10.89□□□□□ -0.67
CTDSP1-211ENST00000492545 ATP5EP2Q5VTU8 51 aa10.87□□□□□ -0.67
CTDSP1-211ENST00000492545 CYP4F30PQ9H0H9 118 aa10.87□□□□□ -0.67
CTDSP1-211ENST00000492545 FAM236AA0A1B0GUQ0 79 aa10.86□□□□□ -0.67
CTDSP1-211ENST00000492545 FAM236BA0A1B0GV22 79 aa10.86□□□□□ -0.67
CTDSP1-211ENST00000492545 LCA10Q71F78 164 aa10.86□□□□□ -0.67
CTDSP1-211ENST00000492545 TRAV22A0A0B4J277 110 aa10.84□□□□□ -0.67
CTDSP1-211ENST00000492545 LOC101927531A0A1B0GV80 90 aa10.82□□□□□ -0.68
CTDSP1-211ENST00000492545 MACF1Q9UPN3 7388 aaKnown RBP10.8□□□□□ -0.68
CTDSP1-211ENST00000492545 UQCRQO14949 82 aa10.75□□□□□ -0.69
CTDSP1-211ENST00000492545 HIST1H4AP62805 103 aaKnown RBP10.75□□□□□ -0.69
CTDSP1-211ENST00000492545 ATOX1O00244 68 aa10.72□□□□□ -0.69
CTDSP1-211ENST00000492545 SYNE2Q8WXH0 6885 aaKnown RBP10.7□□□□□ -0.7
CTDSP1-211ENST00000492545 SPRR2GQ9BYE4 73 aa10.7□□□□□ -0.7
CTDSP1-211ENST00000492545 KRTAP3-3Q9BYR6 98 aa10.7□□□□□ -0.7
CTDSP1-211ENST00000492545 LINC00643Q86TS7 51 aa10.67□□□□□ -0.7
CTDSP1-211ENST00000492545 KLKP1Q107X0 134 aa10.66□□□□□ -0.7
CTDSP1-211ENST00000492545 Q5VV11 94 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms