RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 SIGMAR1Q99720 223 aa8.64□□□□□ -1.03
TRA2A-208ENST00000490942 SEC61BP60468 96 aaKnown RBP8.62□□□□□ -1.03
TRA2A-208ENST00000490942 NREPQ16612 68 aa8.62□□□□□ -1.03
TRA2A-208ENST00000490942 ETDBQ3ZM63 59 aa8.61□□□□□ -1.03
TRA2A-208ENST00000490942 MUC17Q685J3 4493 aa8.58□□□□□ -1.04
TRA2A-208ENST00000490942 A0A1B0GV90 55 aa8.58□□□□□ -1.04
TRA2A-208ENST00000490942 DEFB116Q30KQ4 102 aa8.58□□□□□ -1.04
TRA2A-208ENST00000490942 NDUFB1O75438 58 aa8.57□□□□□ -1.04
TRA2A-208ENST00000490942 A0A1B0GVX0 72 aa8.56□□□□□ -1.04
TRA2A-208ENST00000490942 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.56□□□□□ -1.04
TRA2A-208ENST00000490942 C8orf87E5RJ46 101 aa8.56□□□□□ -1.04
TRA2A-208ENST00000490942 LINC00313P59037 77 aa8.56□□□□□ -1.04
TRA2A-208ENST00000490942 RPL37P61927 97 aaKnown RBP8.56□□□□□ -1.04
TRA2A-208ENST00000490942 KRTAP9-2Q9BYQ4 174 aa8.56□□□□□ -1.04
TRA2A-208ENST00000490942 A8MWP4 228 aa8.55□□□□□ -1.04
TRA2A-208ENST00000490942 Q75L30 129 aa8.55□□□□□ -1.04
TRA2A-208ENST00000490942 Q6ZVQ6 151 aa8.53□□□□□ -1.04
TRA2A-208ENST00000490942 C20orf166-AS1Q96NR2 134 aa8.53□□□□□ -1.04
TRA2A-208ENST00000490942 IGHV6-1A0A0B4J1U7 121 aa8.52□□□□□ -1.05
TRA2A-208ENST00000490942 KRTAP9-6A0A140TA67 174 aa8.52□□□□□ -1.05
TRA2A-208ENST00000490942 UBL5Q9BZL1 73 aa8.52□□□□□ -1.05
TRA2A-208ENST00000490942 DSCR10P59022 87 aa8.51□□□□□ -1.05
TRA2A-208ENST00000490942 LINC00846Q9NV44 126 aa8.51□□□□□ -1.05
TRA2A-208ENST00000490942 A8MUU9 505 aa8.5□□□□□ -1.05
TRA2A-208ENST00000490942 BPY2O14599 106 aa8.49□□□□□ -1.05
TRA2A-208ENST00000490942 ACYP1P07311 99 aa8.49□□□□□ -1.05
TRA2A-208ENST00000490942 PRR15Q8IV56 129 aa8.49□□□□□ -1.05
TRA2A-208ENST00000490942 IGKV3D-7A0A0C4DH55 119 aa8.48□□□□□ -1.05
TRA2A-208ENST00000490942 FAM240AA0A1B0GVK7 77 aa8.48□□□□□ -1.05
TRA2A-208ENST00000490942 KRTAP16-1A8MUX0 517 aa8.48□□□□□ -1.05
TRA2A-208ENST00000490942 RNF213Q63HN8 5207 aa8.47□□□□□ -1.05
TRA2A-208ENST00000490942 PCOTHQ58A44 107 aa8.46□□□□□ -1.06
TRA2A-208ENST00000490942 NOTCH2NLQ7Z3S9 236 aa8.46□□□□□ -1.06
TRA2A-208ENST00000490942 ATP11AUNQ6ZP68 121 aa8.45□□□□□ -1.06
TRA2A-208ENST00000490942 C8orf17Q9NRJ1 99 aa8.44□□□□□ -1.06
TRA2A-208ENST00000490942 K7EQZ3 153 aa8.41□□□□□ -1.06
TRA2A-208ENST00000490942 CXCL6P80162 114 aa8.4□□□□□ -1.06
TRA2A-208ENST00000490942 MUC2Q02817 5179 aa8.39□□□□□ -1.07
TRA2A-208ENST00000490942 A0A0U1RQV1 116 aa8.39□□□□□ -1.07
TRA2A-208ENST00000490942 Q8N9P0 234 aaPredicted RBP8.39□□□□□ -1.07
TRA2A-208ENST00000490942 TMEM254Q8TBM7 123 aa8.38□□□□□ -1.07
TRA2A-208ENST00000490942 MMP24-AS1A0A0U1RRL7 71 aa8.37□□□□□ -1.07
TRA2A-208ENST00000490942 KRTAP4-1Q9BYQ7 146 aa8.36□□□□□ -1.07
TRA2A-208ENST00000490942 J3QR89 54 aa8.35□□□□□ -1.07
TRA2A-208ENST00000490942 hDV103S1A0JD37 113 aa8.34□□□□□ -1.07
TRA2A-208ENST00000490942 ATP5EP2Q5VTU8 51 aa8.34□□□□□ -1.07
TRA2A-208ENST00000490942 MRPL34Q9BQ48 92 aaKnown RBP8.34□□□□□ -1.07
TRA2A-208ENST00000490942 Q8N9L7 120 aa8.31□□□□□ -1.08
TRA2A-208ENST00000490942 KRTAP4-12Q9BQ66 201 aa8.31□□□□□ -1.08
TRA2A-208ENST00000490942 LCE3BQ5TA77 95 aa8.3□□□□□ -1.08
TRA2A-208ENST00000490942 ZCCHC13Q8WW36 166 aaKnown RBP8.29□□□□□ -1.08
TRA2A-208ENST00000490942 CASC2Q6XLA1 102 aa8.28□□□□□ -1.08
TRA2A-208ENST00000490942 LINC00643Q86TS7 51 aa8.28□□□□□ -1.08
TRA2A-208ENST00000490942 HCG22E2RYF7 251 aa8.27□□□□□ -1.09
TRA2A-208ENST00000490942 WFDC13Q8IUB5 93 aa8.24□□□□□ -1.09
TRA2A-208ENST00000490942 NDUFS5O43920 106 aa8.2□□□□□ -1.1
TRA2A-208ENST00000490942 FAT4Q6V0I7 4981 aa8.18□□□□□ -1.1
TRA2A-208ENST00000490942 K7ERU9 68 aa8.18□□□□□ -1.1
TRA2A-208ENST00000490942 KRTAP19-2Q3LHN2 52 aa8.17□□□□□ -1.1
TRA2A-208ENST00000490942 TP53AIP1Q9HCN2 124 aa8.16□□□□□ -1.1
TRA2A-208ENST00000490942 HIST1H4AP62805 103 aaKnown RBP8.14□□□□□ -1.11
TRA2A-208ENST00000490942 KRTAP9-9Q9BYP9 154 aa8.14□□□□□ -1.11
TRA2A-208ENST00000490942 KRTAP9-4Q9BYQ2 154 aa8.14□□□□□ -1.11
TRA2A-208ENST00000490942 SPINK7P58062 85 aa8.13□□□□□ -1.11
TRA2A-208ENST00000490942 KRTAP19-1Q8IUB9 90 aa8.13□□□□□ -1.11
TRA2A-208ENST00000490942 HRES1P13985 223 aa8.09□□□□□ -1.11
TRA2A-208ENST00000490942 Q5W150 140 aa8.09□□□□□ -1.11
TRA2A-208ENST00000490942 MPLKIPQ8TAP9 179 aa8.09□□□□□ -1.11
TRA2A-208ENST00000490942 COX6B2Q6YFQ2 88 aa8.08□□□□□ -1.12
TRA2A-208ENST00000490942 RBM12B-AS1Q9P1G2 102 aa8.06□□□□□ -1.12
TRA2A-208ENST00000490942 IMUPQ9GZP8 106 aa8.05□□□□□ -1.12
TRA2A-208ENST00000490942 KRTAP4-8A0A0G2JLE6 195 aa8.04□□□□□ -1.12
TRA2A-208ENST00000490942 C7orf65Q6ZTY9 151 aa8.04□□□□□ -1.12
TRA2A-208ENST00000490942 A0A087WVE0 104 aa8.03□□□□□ -1.12
TRA2A-208ENST00000490942 MT1HP80294 61 aa8□□□□□ -1.13
TRA2A-208ENST00000490942 UQCRQO14949 82 aa7.99□□□□□ -1.13
TRA2A-208ENST00000490942 IGKV2D-30A0A075B6S6 120 aa7.98□□□□□ -1.13
TRA2A-208ENST00000490942 IGKV2-30P06310 120 aa7.98□□□□□ -1.13
TRA2A-208ENST00000490942 TRAV22A0A0B4J277 110 aa7.97□□□□□ -1.13
TRA2A-208ENST00000490942 FAM236DA0A1B0GTK5 79 aa7.97□□□□□ -1.13
TRA2A-208ENST00000490942 FAM236CP0DP71 79 aa7.97□□□□□ -1.13
TRA2A-208ENST00000490942 ATOX1O00244 68 aa7.94□□□□□ -1.14
TRA2A-208ENST00000490942 MT-ATP8P03928 68 aa7.93□□□□□ -1.14
TRA2A-208ENST00000490942 OCR1Q9BZK8 76 aa7.93□□□□□ -1.14
TRA2A-208ENST00000490942 FLGP20930 4061 aaPredicted RBP7.92□□□□□ -1.14
TRA2A-208ENST00000490942 LOC101927531A0A1B0GV80 90 aa7.92□□□□□ -1.14
TRA2A-208ENST00000490942 SCGB1A1P11684 91 aa7.88□□□□□ -1.15
TRA2A-208ENST00000490942 H0Y9P7 68 aa7.87□□□□□ -1.15
TRA2A-208ENST00000490942 CYP4F30PQ9H0H9 118 aa7.87□□□□□ -1.15
TRA2A-208ENST00000490942 M0R2T5 61 aa7.86□□□□□ -1.15
TRA2A-208ENST00000490942 C5orf47Q569G3 176 aa7.86□□□□□ -1.15
TRA2A-208ENST00000490942 MP68P56378 58 aa7.84□□□□□ -1.15
TRA2A-208ENST00000490942 SMIM20Q8N5G0 67 aa7.83□□□□□ -1.16
TRA2A-208ENST00000490942 H3BPC8 53 aa7.82□□□□□ -1.16
TRA2A-208ENST00000490942 H1FX-AS1Q4G0G2 97 aa7.82□□□□□ -1.16
TRA2A-208ENST00000490942 C4orf26Q17RF5 130 aa7.81□□□□□ -1.16
TRA2A-208ENST00000490942 FAM236AA0A1B0GUQ0 79 aa7.8□□□□□ -1.16
TRA2A-208ENST00000490942 FAM236BA0A1B0GV22 79 aa7.8□□□□□ -1.16
TRA2A-208ENST00000490942 C1orf64Q8NEQ6 169 aa7.8□□□□□ -1.16
TRA2A-208ENST00000490942 KRTAP10-6P60371 365 aaPredicted RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms