RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 MT2AP02795 61 aa9.82□□□□□ -0.84
SREBF1-216ENST00000490796 MPLKIPQ8TAP9 179 aa9.82□□□□□ -0.84
SREBF1-216ENST00000490796 PYY3Q5JQD4 70 aa9.79□□□□□ -0.84
SREBF1-216ENST00000490796 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.78□□□□□ -0.84
SREBF1-216ENST00000490796 KRTAP10-10P60014 251 aa9.78□□□□□ -0.84
SREBF1-216ENST00000490796 C21orf62-AS1Q17RA5 79 aa9.78□□□□□ -0.84
SREBF1-216ENST00000490796 J3KT08 172 aa9.77□□□□□ -0.85
SREBF1-216ENST00000490796 UQCR10Q9UDW1 63 aa9.77□□□□□ -0.85
SREBF1-216ENST00000490796 KRTAP9-7A8MTY7 169 aa9.75□□□□□ -0.85
SREBF1-216ENST00000490796 C9JAW5 83 aa9.75□□□□□ -0.85
SREBF1-216ENST00000490796 ZCCHC13Q8WW36 166 aaKnown RBP9.75□□□□□ -0.85
SREBF1-216ENST00000490796 NDUFB1O75438 58 aa9.74□□□□□ -0.85
SREBF1-216ENST00000490796 MT1FP04733 61 aa9.74□□□□□ -0.85
SREBF1-216ENST00000490796 BAALC-AS2P0C853 105 aa9.72□□□□□ -0.85
SREBF1-216ENST00000490796 SPINK7P58062 85 aa9.71□□□□□ -0.86
SREBF1-216ENST00000490796 LYRM7Q5U5X0 104 aa9.71□□□□□ -0.86
SREBF1-216ENST00000490796 Q6ZQT0 140 aa9.68□□□□□ -0.86
SREBF1-216ENST00000490796 FCGBPQ9Y6R7 5405 aaPredicted RBP9.67□□□□□ -0.86
SREBF1-216ENST00000490796 LCE2BO14633 110 aa9.66□□□□□ -0.86
SREBF1-216ENST00000490796 KRTAP9-3Q9BYQ3 159 aa9.66□□□□□ -0.86
SREBF1-216ENST00000490796 KRTAP19-1Q8IUB9 90 aa9.63□□□□□ -0.87
SREBF1-216ENST00000490796 JMJD7-PLA2G4BH0Y9G9 81 aa9.62□□□□□ -0.87
SREBF1-216ENST00000490796 Q8N9P0 234 aaPredicted RBP9.62□□□□□ -0.87
SREBF1-216ENST00000490796 C8orf17Q9NRJ1 99 aa9.61□□□□□ -0.87
SREBF1-216ENST00000490796 A8MWP4 228 aa9.6□□□□□ -0.87
SREBF1-216ENST00000490796 ATXN8Q156A1 80 aa9.6□□□□□ -0.87
SREBF1-216ENST00000490796 WFDC13Q8IUB5 93 aa9.6□□□□□ -0.87
SREBF1-216ENST00000490796 A0A1B0GW54 56 aa9.59□□□□□ -0.87
SREBF1-216ENST00000490796 TMA7Q9Y2S6 64 aaKnown RBP9.59□□□□□ -0.87
SREBF1-216ENST00000490796 PDE6GP18545 87 aa9.57□□□□□ -0.88
SREBF1-216ENST00000490796 LINC00846Q9NV44 126 aa9.57□□□□□ -0.88
SREBF1-216ENST00000490796 LOC110117498A0A087WWA1 95 aa9.55□□□□□ -0.88
SREBF1-216ENST00000490796 Q6ZVQ6 151 aa9.55□□□□□ -0.88
SREBF1-216ENST00000490796 IGKV3D-7A0A0C4DH55 119 aa9.54□□□□□ -0.88
SREBF1-216ENST00000490796 M0R143 59 aa9.53□□□□□ -0.88
SREBF1-216ENST00000490796 NAA38Q9BRA0 125 aaKnown RBP9.52□□□□□ -0.89
SREBF1-216ENST00000490796 NREPQ16612 68 aa9.51□□□□□ -0.89
SREBF1-216ENST00000490796 C14orf132Q9NPU4 83 aa9.5□□□□□ -0.89
SREBF1-216ENST00000490796 PRR15Q8IV56 129 aa9.49□□□□□ -0.89
SREBF1-216ENST00000490796 MRPL34Q9BQ48 92 aaKnown RBP9.45□□□□□ -0.9
SREBF1-216ENST00000490796 NDUFS5O43920 106 aa9.44□□□□□ -0.9
SREBF1-216ENST00000490796 TMEM254Q8TBM7 123 aa9.44□□□□□ -0.9
SREBF1-216ENST00000490796 MMP24-AS1A0A0U1RRL7 71 aa9.4□□□□□ -0.9
SREBF1-216ENST00000490796 H1FX-AS1Q4G0G2 97 aa9.4□□□□□ -0.9
SREBF1-216ENST00000490796 hDV103S1A0JD37 113 aa9.39□□□□□ -0.91
SREBF1-216ENST00000490796 MACF1Q9UPN3 7388 aaKnown RBP9.38□□□□□ -0.91
SREBF1-216ENST00000490796 KRTAP19-6Q3LI70 58 aa9.38□□□□□ -0.91
SREBF1-216ENST00000490796 K7EQZ3 153 aa9.35□□□□□ -0.91
SREBF1-216ENST00000490796 SYNE2Q8WXH0 6885 aaKnown RBP9.35□□□□□ -0.91
SREBF1-216ENST00000490796 IGKV2D-30A0A075B6S6 120 aa9.34□□□□□ -0.91
SREBF1-216ENST00000490796 IGKV2-30P06310 120 aa9.34□□□□□ -0.91
SREBF1-216ENST00000490796 BATFQ16520 125 aa9.31□□□□□ -0.92
SREBF1-216ENST00000490796 BPY2O14599 106 aa9.3□□□□□ -0.92
SREBF1-216ENST00000490796 C7orf65Q6ZTY9 151 aa9.3□□□□□ -0.92
SREBF1-216ENST00000490796 H3BT86 120 aa9.27□□□□□ -0.93
SREBF1-216ENST00000490796 TSTD3H0UI37 97 aa9.26□□□□□ -0.93
SREBF1-216ENST00000490796 SMIM6P0DI80 62 aa9.24□□□□□ -0.93
SREBF1-216ENST00000490796 Q5W150 140 aa9.22□□□□□ -0.93
SREBF1-216ENST00000490796 CASC2Q6XLA1 102 aa9.21□□□□□ -0.94
SREBF1-216ENST00000490796 HCG22E2RYF7 251 aa9.2□□□□□ -0.94
SREBF1-216ENST00000490796 C9orf118A6NHY6 69 aa9.19□□□□□ -0.94
SREBF1-216ENST00000490796 Q8N9L7 120 aa9.17□□□□□ -0.94
SREBF1-216ENST00000490796 A0A1W2PPM0 123 aa9.16□□□□□ -0.94
SREBF1-216ENST00000490796 C4orf26Q17RF5 130 aa9.16□□□□□ -0.94
SREBF1-216ENST00000490796 CXCL6P80162 114 aa9.14□□□□□ -0.95
SREBF1-216ENST00000490796 FAM236AA0A1B0GUQ0 79 aa9.11□□□□□ -0.95
SREBF1-216ENST00000490796 FAM236BA0A1B0GV22 79 aa9.11□□□□□ -0.95
SREBF1-216ENST00000490796 TAX1BP3O14907 124 aa9.11□□□□□ -0.95
SREBF1-216ENST00000490796 KRTAP6-3Q3LI67 103 aa9.09□□□□□ -0.95
SREBF1-216ENST00000490796 C5orf47Q569G3 176 aa9.09□□□□□ -0.95
SREBF1-216ENST00000490796 UBL5Q9BZL1 73 aa9.05□□□□□ -0.96
SREBF1-216ENST00000490796 SPCS1Q9Y6A9 102 aa9.04□□□□□ -0.96
SREBF1-216ENST00000490796 S4R3F8 94 aa9.03□□□□□ -0.96
SREBF1-216ENST00000490796 CSAG1Q6PB30 78 aa9.01□□□□□ -0.97
SREBF1-216ENST00000490796 C1orf64Q8NEQ6 169 aa8.98□□□□□ -0.97
SREBF1-216ENST00000490796 A6NN06 94 aa8.96□□□□□ -0.98
SREBF1-216ENST00000490796 SMCPP49901 116 aaPredicted RBP8.95□□□□□ -0.98
SREBF1-216ENST00000490796 Q5VV11 94 aa8.94□□□□□ -0.98
SREBF1-216ENST00000490796 KRTAP3-1Q9BYR8 98 aa8.94□□□□□ -0.98
SREBF1-216ENST00000490796 LCA10Q71F78 164 aa8.91□□□□□ -0.98
SREBF1-216ENST00000490796 TP53AIP1Q9HCN2 124 aa8.91□□□□□ -0.98
SREBF1-216ENST00000490796 MT1BP07438 61 aa8.86□□□□□ -0.99
SREBF1-216ENST00000490796 SPRR2GQ9BYE4 73 aa8.86□□□□□ -0.99
SREBF1-216ENST00000490796 KRTAP19-8Q3LI54 63 aa8.83□□□□□ -1
SREBF1-216ENST00000490796 COL5A1-AS1Q5SY13 56 aa8.83□□□□□ -1
SREBF1-216ENST00000490796 PRO0461Q9UI25 63 aa8.83□□□□□ -1
SREBF1-216ENST00000490796 NEBP20929 6669 aa8.82□□□□□ -1
SREBF1-216ENST00000490796 LOC105371267A0A1B0GV96 52 aa8.81□□□□□ -1
SREBF1-216ENST00000490796 K7EP34 96 aa8.81□□□□□ -1
SREBF1-216ENST00000490796 KLKP1Q107X0 134 aa8.81□□□□□ -1
SREBF1-216ENST00000490796 MUC12Q9UKN1 5478 aa8.75□□□□□ -1.01
SREBF1-216ENST00000490796 KRTAP10-5P60370 271 aa8.74□□□□□ -1.01
SREBF1-216ENST00000490796 CYP4F30PQ9H0H9 118 aa8.73□□□□□ -1.01
SREBF1-216ENST00000490796 GTF2H5Q6ZYL4 71 aa8.72□□□□□ -1.01
SREBF1-216ENST00000490796 IMUPQ9GZP8 106 aa8.72□□□□□ -1.01
SREBF1-216ENST00000490796 KRTAP3-3Q9BYR6 98 aa8.7□□□□□ -1.02
SREBF1-216ENST00000490796 CRIPTQ9P021 101 aa8.7□□□□□ -1.02
SREBF1-216ENST00000490796 TRAV22A0A0B4J277 110 aa8.67□□□□□ -1.02
SREBF1-216ENST00000490796 LOC101927531A0A1B0GV80 90 aa8.67□□□□□ -1.02
SREBF1-216ENST00000490796 F8W1H4 67 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms