RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 H3BQ85 93 aa6.8□□□□□ -1.32
VARS-227ENST00000489979 FABP2P12104 132 aa6.76□□□□□ -1.33
VARS-227ENST00000489979 NDUFV3P56181 108 aaKnown RBP6.76□□□□□ -1.33
VARS-227ENST00000489979 FAM218AQ96MZ4 157 aa6.76□□□□□ -1.33
VARS-227ENST00000489979 ORMDL1Q9P0S3 153 aa6.76□□□□□ -1.33
VARS-227ENST00000489979 LYRM7Q5U5X0 104 aa6.75□□□□□ -1.33
VARS-227ENST00000489979 MTURNQ8N3F0 131 aa6.75□□□□□ -1.33
VARS-227ENST00000489979 NAA38Q9BRA0 125 aaKnown RBP6.75□□□□□ -1.33
VARS-227ENST00000489979 IGKV4-1P06312 121 aa6.74□□□□□ -1.33
VARS-227ENST00000489979 H3BMG7 143 aa6.73□□□□□ -1.33
VARS-227ENST00000489979 TMEM256-PLSCR3K7ERE1 68 aa6.73□□□□□ -1.33
VARS-227ENST00000489979 A0A1W2PNM2 257 aa6.72□□□□□ -1.33
VARS-227ENST00000489979 TRACP01848 142 aa6.71□□□□□ -1.34
VARS-227ENST00000489979 A8MWP4 228 aa6.7□□□□□ -1.34
VARS-227ENST00000489979 ATXN8Q156A1 80 aa6.69□□□□□ -1.34
VARS-227ENST00000489979 Q8N9P0 234 aaPredicted RBP6.69□□□□□ -1.34
VARS-227ENST00000489979 NEBP20929 6669 aa6.69□□□□□ -1.34
VARS-227ENST00000489979 DEFB116Q30KQ4 102 aa6.68□□□□□ -1.34
VARS-227ENST00000489979 IGHV6-1A0A0B4J1U7 121 aa6.67□□□□□ -1.34
VARS-227ENST00000489979 TAX1BP3O14907 124 aa6.66□□□□□ -1.34
VARS-227ENST00000489979 UBE2V1Q13404 147 aa6.66□□□□□ -1.34
VARS-227ENST00000489979 MUC12Q9UKN1 5478 aa6.65□□□□□ -1.34
VARS-227ENST00000489979 SPINK7P58062 85 aa6.65□□□□□ -1.34
VARS-227ENST00000489979 ANKRD29Q8N6D5 301 aa6.65□□□□□ -1.34
VARS-227ENST00000489979 LINC00472Q9H8W2 130 aa6.64□□□□□ -1.35
VARS-227ENST00000489979 TRBV7-4A0A0J9YYF1 115 aa6.63□□□□□ -1.35
VARS-227ENST00000489979 BAALC-AS2P0C853 105 aa6.63□□□□□ -1.35
VARS-227ENST00000489979 A0A1B0GV72 72 aa6.62□□□□□ -1.35
VARS-227ENST00000489979 C9orf118A6NHY6 69 aa6.62□□□□□ -1.35
VARS-227ENST00000489979 ZCCHC13Q8WW36 166 aaKnown RBP6.62□□□□□ -1.35
VARS-227ENST00000489979 DSCR8Q96T75 97 aa6.62□□□□□ -1.35
VARS-227ENST00000489979 RBM3P98179 157 aaKnown RBP6.61□□□□□ -1.35
VARS-227ENST00000489979 COL5A1-AS1Q5SY13 56 aa6.6□□□□□ -1.35
VARS-227ENST00000489979 C8orf87E5RJ46 101 aa6.59□□□□□ -1.35
VARS-227ENST00000489979 JMJD7-PLA2G4BH0Y9G9 81 aa6.59□□□□□ -1.35
VARS-227ENST00000489979 A0A1W2PPM0 123 aa6.58□□□□□ -1.36
VARS-227ENST00000489979 CCKP06307 115 aa6.58□□□□□ -1.36
VARS-227ENST00000489979 C21orf62-AS1Q17RA5 79 aa6.58□□□□□ -1.36
VARS-227ENST00000489979 A0A1B0GVX0 72 aa6.57□□□□□ -1.36
VARS-227ENST00000489979 C9JAW5 83 aa6.57□□□□□ -1.36
VARS-227ENST00000489979 WFDC13Q8IUB5 93 aa6.57□□□□□ -1.36
VARS-227ENST00000489979 VPS25Q9BRG1 176 aa6.56□□□□□ -1.36
VARS-227ENST00000489979 PDE6GP18545 87 aa6.54□□□□□ -1.36
VARS-227ENST00000489979 KRTAP20-1Q3LI63 56 aa6.53□□□□□ -1.36
VARS-227ENST00000489979 SPCS1Q9Y6A9 102 aa6.53□□□□□ -1.36
VARS-227ENST00000489979 H3BT86 120 aa6.52□□□□□ -1.37
VARS-227ENST00000489979 LOC110117498A0A087WWA1 95 aa6.49□□□□□ -1.37
VARS-227ENST00000489979 A0A1B0GW54 56 aa6.49□□□□□ -1.37
VARS-227ENST00000489979 A0A1B0GV90 55 aa6.48□□□□□ -1.37
VARS-227ENST00000489979 K7EP34 96 aa6.48□□□□□ -1.37
VARS-227ENST00000489979 C14orf132Q9NPU4 83 aa6.47□□□□□ -1.37
VARS-227ENST00000489979 Q6ZQT0 140 aa6.46□□□□□ -1.38
VARS-227ENST00000489979 GTF2H5Q6ZYL4 71 aa6.46□□□□□ -1.38
VARS-227ENST00000489979 A6NN06 94 aa6.45□□□□□ -1.38
VARS-227ENST00000489979 H1FX-AS1Q4G0G2 97 aa6.45□□□□□ -1.38
VARS-227ENST00000489979 J3KT08 172 aa6.44□□□□□ -1.38
VARS-227ENST00000489979 SMCPP49901 116 aaPredicted RBP6.42□□□□□ -1.38
VARS-227ENST00000489979 NDUFB1O75438 58 aa6.41□□□□□ -1.38
VARS-227ENST00000489979 PRO0461Q9UI25 63 aa6.41□□□□□ -1.38
VARS-227ENST00000489979 NREPQ16612 68 aa6.4□□□□□ -1.38
VARS-227ENST00000489979 C8orf17Q9NRJ1 99 aa6.4□□□□□ -1.38
VARS-227ENST00000489979 IGKV3D-7A0A0C4DH55 119 aa6.39□□□□□ -1.39
VARS-227ENST00000489979 MDN1Q9NU22 5596 aa6.37□□□□□ -1.39
VARS-227ENST00000489979 MT1BP07438 61 aa6.36□□□□□ -1.39
VARS-227ENST00000489979 KMT2DO14686 5537 aa6.36□□□□□ -1.39
VARS-227ENST00000489979 F8W1H4 67 aa6.35□□□□□ -1.39
VARS-227ENST00000489979 Q6ZVQ6 151 aa6.35□□□□□ -1.39
VARS-227ENST00000489979 KRTAP5-9P26371 169 aa6.34□□□□□ -1.39
VARS-227ENST00000489979 Q5VV11 94 aa6.32□□□□□ -1.4
VARS-227ENST00000489979 KRTAP10-5P60370 271 aa6.3□□□□□ -1.4
VARS-227ENST00000489979 ETDBQ3ZM63 59 aa6.3□□□□□ -1.4
VARS-227ENST00000489979 UBL5Q9BZL1 73 aa6.3□□□□□ -1.4
VARS-227ENST00000489979 FAM236AA0A1B0GUQ0 79 aa6.29□□□□□ -1.4
VARS-227ENST00000489979 FAM236BA0A1B0GV22 79 aa6.29□□□□□ -1.4
VARS-227ENST00000489979 BPY2O14599 106 aa6.29□□□□□ -1.4
VARS-227ENST00000489979 KRTAP19-8Q3LI54 63 aa6.28□□□□□ -1.4
VARS-227ENST00000489979 IGKV2D-30A0A075B6S6 120 aa6.27□□□□□ -1.41
VARS-227ENST00000489979 IGKV2-30P06310 120 aa6.27□□□□□ -1.41
VARS-227ENST00000489979 MRPL34Q9BQ48 92 aaKnown RBP6.27□□□□□ -1.41
VARS-227ENST00000489979 PRR15Q8IV56 129 aa6.26□□□□□ -1.41
VARS-227ENST00000489979 TMEM254Q8TBM7 123 aa6.26□□□□□ -1.41
VARS-227ENST00000489979 KRTAP2-3P0C7H8 128 aa6.25□□□□□ -1.41
VARS-227ENST00000489979 KRTAP2-4Q9BYR9 128 aa6.25□□□□□ -1.41
VARS-227ENST00000489979 MMP24-AS1A0A0U1RRL7 71 aa6.24□□□□□ -1.41
VARS-227ENST00000489979 C5orf47Q569G3 176 aa6.24□□□□□ -1.41
VARS-227ENST00000489979 SPRR2GQ9BYE4 73 aa6.24□□□□□ -1.41
VARS-227ENST00000489979 NDUFS5O43920 106 aa6.23□□□□□ -1.41
VARS-227ENST00000489979 C7orf65Q6ZTY9 151 aa6.22□□□□□ -1.41
VARS-227ENST00000489979 hDV103S1A0JD37 113 aa6.2□□□□□ -1.42
VARS-227ENST00000489979 K7EQZ3 153 aa6.2□□□□□ -1.42
VARS-227ENST00000489979 C4orf26Q17RF5 130 aa6.2□□□□□ -1.42
VARS-227ENST00000489979 ACYP1P07311 99 aa6.19□□□□□ -1.42
VARS-227ENST00000489979 Q5W150 140 aa6.19□□□□□ -1.42
VARS-227ENST00000489979 CASC2Q6XLA1 102 aa6.15□□□□□ -1.42
VARS-227ENST00000489979 CXCL6P80162 114 aa6.14□□□□□ -1.43
VARS-227ENST00000489979 Q8N9L7 120 aa6.13□□□□□ -1.43
VARS-227ENST00000489979 S4R3F8 94 aa6.13□□□□□ -1.43
VARS-227ENST00000489979 FAM240AA0A1B0GVK7 77 aa6.12□□□□□ -1.43
VARS-227ENST00000489979 CSAG1Q6PB30 78 aa6.12□□□□□ -1.43
VARS-227ENST00000489979 IMUPQ9GZP8 106 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms