RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 A0A1B0GW54 56 aa9.95□□□□□ -0.82
EPHB4-207ENST00000489808 A0A1W2PPM0 123 aa9.94□□□□□ -0.82
EPHB4-207ENST00000489808 C14orf132Q9NPU4 83 aa9.93□□□□□ -0.82
EPHB4-207ENST00000489808 J3KT08 172 aa9.92□□□□□ -0.82
EPHB4-207ENST00000489808 KRTAP9-2Q9BYQ4 174 aa9.92□□□□□ -0.82
EPHB4-207ENST00000489808 A0A1B0GVX0 72 aa9.91□□□□□ -0.82
EPHB4-207ENST00000489808 COX6B2Q6YFQ2 88 aa9.91□□□□□ -0.82
EPHB4-207ENST00000489808 C8orf87E5RJ46 101 aa9.89□□□□□ -0.83
EPHB4-207ENST00000489808 H3BT86 120 aa9.88□□□□□ -0.83
EPHB4-207ENST00000489808 NDUFB1O75438 58 aa9.84□□□□□ -0.83
EPHB4-207ENST00000489808 MTURNQ8N3F0 131 aa9.84□□□□□ -0.83
EPHB4-207ENST00000489808 FLGP20930 4061 aaPredicted RBP9.83□□□□□ -0.84
EPHB4-207ENST00000489808 A8MWP4 228 aa9.81□□□□□ -0.84
EPHB4-207ENST00000489808 NREPQ16612 68 aa9.81□□□□□ -0.84
EPHB4-207ENST00000489808 SPCS1Q9Y6A9 102 aa9.8□□□□□ -0.84
EPHB4-207ENST00000489808 M0R2T5 61 aa9.79□□□□□ -0.84
EPHB4-207ENST00000489808 COL5A1-AS1Q5SY13 56 aa9.79□□□□□ -0.84
EPHB4-207ENST00000489808 IGKV3D-7A0A0C4DH55 119 aa9.78□□□□□ -0.84
EPHB4-207ENST00000489808 KRTAP10-6P60371 365 aaPredicted RBP9.76□□□□□ -0.85
EPHB4-207ENST00000489808 C8orf17Q9NRJ1 99 aa9.76□□□□□ -0.85
EPHB4-207ENST00000489808 LORP23490 312 aaPredicted RBP9.75□□□□□ -0.85
EPHB4-207ENST00000489808 LCE2DQ5TA82 110 aaPredicted RBP9.74□□□□□ -0.85
EPHB4-207ENST00000489808 SMCPP49901 116 aaPredicted RBP9.73□□□□□ -0.85
EPHB4-207ENST00000489808 PRR15Q8IV56 129 aa9.73□□□□□ -0.85
EPHB4-207ENST00000489808 Q8N9P0 234 aaPredicted RBP9.73□□□□□ -0.85
EPHB4-207ENST00000489808 ZCCHC13Q8WW36 166 aaKnown RBP9.71□□□□□ -0.86
EPHB4-207ENST00000489808 HRES1P13985 223 aa9.68□□□□□ -0.86
EPHB4-207ENST00000489808 Q6ZVQ6 151 aa9.68□□□□□ -0.86
EPHB4-207ENST00000489808 PRO0461Q9UI25 63 aa9.67□□□□□ -0.86
EPHB4-207ENST00000489808 K7EP34 96 aa9.66□□□□□ -0.86
EPHB4-207ENST00000489808 MPLKIPQ8TAP9 179 aa9.66□□□□□ -0.86
EPHB4-207ENST00000489808 BPY2O14599 106 aa9.63□□□□□ -0.87
EPHB4-207ENST00000489808 RBM12B-AS1Q9P1G2 102 aa9.63□□□□□ -0.87
EPHB4-207ENST00000489808 MMP24-AS1A0A0U1RRL7 71 aa9.62□□□□□ -0.87
EPHB4-207ENST00000489808 PCP4L1A6NKN8 68 aa9.62□□□□□ -0.87
EPHB4-207ENST00000489808 K7EQZ3 153 aa9.62□□□□□ -0.87
EPHB4-207ENST00000489808 FAM236DA0A1B0GTK5 79 aa9.61□□□□□ -0.87
EPHB4-207ENST00000489808 FAM236CP0DP71 79 aa9.61□□□□□ -0.87
EPHB4-207ENST00000489808 SPINK7P58062 85 aa9.61□□□□□ -0.87
EPHB4-207ENST00000489808 TMEM254Q8TBM7 123 aa9.6□□□□□ -0.87
EPHB4-207ENST00000489808 MRPL34Q9BQ48 92 aaKnown RBP9.6□□□□□ -0.87
EPHB4-207ENST00000489808 hDV103S1A0JD37 113 aa9.58□□□□□ -0.88
EPHB4-207ENST00000489808 GTF2H5Q6ZYL4 71 aa9.56□□□□□ -0.88
EPHB4-207ENST00000489808 KRTAP9-6A0A140TA67 174 aa9.54□□□□□ -0.88
EPHB4-207ENST00000489808 LINC00846Q9NV44 126 aa9.53□□□□□ -0.88
EPHB4-207ENST00000489808 F8W1H4 67 aa9.51□□□□□ -0.89
EPHB4-207ENST00000489808 Q8N9L7 120 aa9.51□□□□□ -0.89
EPHB4-207ENST00000489808 UBL5Q9BZL1 73 aa9.5□□□□□ -0.89
EPHB4-207ENST00000489808 FSIP2Q5CZC0 6907 aa9.49□□□□□ -0.89
EPHB4-207ENST00000489808 NDUFS5O43920 106 aa9.49□□□□□ -0.89
EPHB4-207ENST00000489808 KRTAP9-8Q9BYQ0 159 aa9.48□□□□□ -0.89
EPHB4-207ENST00000489808 WFDC13Q8IUB5 93 aa9.46□□□□□ -0.9
EPHB4-207ENST00000489808 CASC2Q6XLA1 102 aa9.45□□□□□ -0.9
EPHB4-207ENST00000489808 ETDBQ3ZM63 59 aa9.44□□□□□ -0.9
EPHB4-207ENST00000489808 Q5W150 140 aa9.42□□□□□ -0.9
EPHB4-207ENST00000489808 CRCT1Q9UGL9 99 aa9.41□□□□□ -0.9
EPHB4-207ENST00000489808 HCG22E2RYF7 251 aa9.39□□□□□ -0.91
EPHB4-207ENST00000489808 IGKV2D-30A0A075B6S6 120 aa9.33□□□□□ -0.92
EPHB4-207ENST00000489808 MT2AP02795 61 aa9.33□□□□□ -0.92
EPHB4-207ENST00000489808 IGKV2-30P06310 120 aa9.33□□□□□ -0.92
EPHB4-207ENST00000489808 CXCL6P80162 114 aa9.33□□□□□ -0.92
EPHB4-207ENST00000489808 C7orf65Q6ZTY9 151 aa9.31□□□□□ -0.92
EPHB4-207ENST00000489808 MT1FP04733 61 aa9.26□□□□□ -0.93
EPHB4-207ENST00000489808 H1FX-AS1Q4G0G2 97 aa9.26□□□□□ -0.93
EPHB4-207ENST00000489808 ACYP1P07311 99 aa9.24□□□□□ -0.93
EPHB4-207ENST00000489808 KRTAP10-10P60014 251 aa9.23□□□□□ -0.93
EPHB4-207ENST00000489808 TP53AIP1Q9HCN2 124 aa9.2□□□□□ -0.94
EPHB4-207ENST00000489808 USH2AO75445 5202 aa9.17□□□□□ -0.94
EPHB4-207ENST00000489808 FAM240AA0A1B0GVK7 77 aa9.17□□□□□ -0.94
EPHB4-207ENST00000489808 C4orf26Q17RF5 130 aa9.17□□□□□ -0.94
EPHB4-207ENST00000489808 KRTAP9-3Q9BYQ3 159 aa9.17□□□□□ -0.94
EPHB4-207ENST00000489808 A0A1B0GV90 55 aa9.09□□□□□ -0.95
EPHB4-207ENST00000489808 LCE2BO14633 110 aa9.09□□□□□ -0.95
EPHB4-207ENST00000489808 ATP5EP2Q5VTU8 51 aa9.09□□□□□ -0.95
EPHB4-207ENST00000489808 SSPOA2VEC9 5147 aa9.07□□□□□ -0.96
EPHB4-207ENST00000489808 KRTAP3-1Q9BYR8 98 aa9.07□□□□□ -0.96
EPHB4-207ENST00000489808 HIST1H4AP62805 103 aaKnown RBP9.04□□□□□ -0.96
EPHB4-207ENST00000489808 C1orf64Q8NEQ6 169 aa9.03□□□□□ -0.96
EPHB4-207ENST00000489808 LINC00643Q86TS7 51 aa9.01□□□□□ -0.97
EPHB4-207ENST00000489808 CYP4F30PQ9H0H9 118 aa9□□□□□ -0.97
EPHB4-207ENST00000489808 TRAV22A0A0B4J277 110 aa8.98□□□□□ -0.97
EPHB4-207ENST00000489808 UQCRQO14949 82 aa8.95□□□□□ -0.98
EPHB4-207ENST00000489808 LOC101927531A0A1B0GV80 90 aa8.94□□□□□ -0.98
EPHB4-207ENST00000489808 A0A087WVE0 104 aa8.93□□□□□ -0.98
EPHB4-207ENST00000489808 C5orf47Q569G3 176 aa8.93□□□□□ -0.98
EPHB4-207ENST00000489808 S4R3F8 94 aa8.93□□□□□ -0.98
EPHB4-207ENST00000489808 CSAG1Q6PB30 78 aa8.89□□□□□ -0.99
EPHB4-207ENST00000489808 LCA10Q71F78 164 aa8.89□□□□□ -0.99
EPHB4-207ENST00000489808 KRTAP19-1Q8IUB9 90 aa8.88□□□□□ -0.99
EPHB4-207ENST00000489808 H0Y9P7 68 aa8.87□□□□□ -0.99
EPHB4-207ENST00000489808 ATOX1O00244 68 aa8.87□□□□□ -0.99
EPHB4-207ENST00000489808 J3QR89 54 aa8.85□□□□□ -0.99
EPHB4-207ENST00000489808 FCGBPQ9Y6R7 5405 aaPredicted RBP8.84□□□□□ -0.99
EPHB4-207ENST00000489808 KRTAP3-3Q9BYR6 98 aa8.8□□□□□ -1
EPHB4-207ENST00000489808 OCR1Q9BZK8 76 aa8.78□□□□□ -1
EPHB4-207ENST00000489808 FAM236AA0A1B0GUQ0 79 aa8.76□□□□□ -1.01
EPHB4-207ENST00000489808 FAM236BA0A1B0GV22 79 aa8.76□□□□□ -1.01
EPHB4-207ENST00000489808 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.75□□□□□ -1.01
EPHB4-207ENST00000489808 KRTAP19-6Q3LI70 58 aa8.75□□□□□ -1.01
EPHB4-207ENST00000489808 LINC00208Q96KT6 92 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms