RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 DSCR8Q96T75 97 aa7.15□□□□□ -1.26
VTI1A-206ENST00000489142 TRBV20-1A0A075B6N2 111 aa7.13□□□□□ -1.27
VTI1A-206ENST00000489142 LOC105371267A0A1B0GV96 52 aa7.11□□□□□ -1.27
VTI1A-206ENST00000489142 C9JAW5 83 aa7.11□□□□□ -1.27
VTI1A-206ENST00000489142 M0R143 59 aa7.11□□□□□ -1.27
VTI1A-206ENST00000489142 A0A1B0GVX0 72 aa7.1□□□□□ -1.27
VTI1A-206ENST00000489142 TSTD3H0UI37 97 aa7.1□□□□□ -1.27
VTI1A-206ENST00000489142 ATXN8Q156A1 80 aa7.09□□□□□ -1.27
VTI1A-206ENST00000489142 FAM236DA0A1B0GTK5 79 aa7.07□□□□□ -1.28
VTI1A-206ENST00000489142 FAM236CP0DP71 79 aa7.07□□□□□ -1.28
VTI1A-206ENST00000489142 Q6ZQT0 140 aa7.07□□□□□ -1.28
VTI1A-206ENST00000489142 C8orf87E5RJ46 101 aa7.06□□□□□ -1.28
VTI1A-206ENST00000489142 HRES1P13985 223 aa7.05□□□□□ -1.28
VTI1A-206ENST00000489142 BATFQ16520 125 aa7.05□□□□□ -1.28
VTI1A-206ENST00000489142 C14orf132Q9NPU4 83 aa7.04□□□□□ -1.28
VTI1A-206ENST00000489142 J3KT08 172 aa7.03□□□□□ -1.28
VTI1A-206ENST00000489142 JMJD7-PLA2G4BH0Y9G9 81 aa7.02□□□□□ -1.29
VTI1A-206ENST00000489142 KRTAP9-8Q9BYQ0 159 aa7.02□□□□□ -1.29
VTI1A-206ENST00000489142 LOC110117498A0A087WWA1 95 aa7.01□□□□□ -1.29
VTI1A-206ENST00000489142 MPLKIPQ8TAP9 179 aa7.01□□□□□ -1.29
VTI1A-206ENST00000489142 RBM12B-AS1Q9P1G2 102 aa7.01□□□□□ -1.29
VTI1A-206ENST00000489142 ZCCHC13Q8WW36 166 aaKnown RBP7□□□□□ -1.29
VTI1A-206ENST00000489142 NDUFB1O75438 58 aa6.99□□□□□ -1.29
VTI1A-206ENST00000489142 C21orf62-AS1Q17RA5 79 aa6.99□□□□□ -1.29
VTI1A-206ENST00000489142 C8orf17Q9NRJ1 99 aa6.98□□□□□ -1.29
VTI1A-206ENST00000489142 IGKV3D-7A0A0C4DH55 119 aa6.97□□□□□ -1.29
VTI1A-206ENST00000489142 A8MWP4 228 aa6.97□□□□□ -1.29
VTI1A-206ENST00000489142 LYRM7Q5U5X0 104 aa6.97□□□□□ -1.29
VTI1A-206ENST00000489142 MTURNQ8N3F0 131 aa6.97□□□□□ -1.29
VTI1A-206ENST00000489142 Q8N9P0 234 aaPredicted RBP6.95□□□□□ -1.3
VTI1A-206ENST00000489142 PDE6GP18545 87 aa6.94□□□□□ -1.3
VTI1A-206ENST00000489142 SPINK7P58062 85 aa6.94□□□□□ -1.3
VTI1A-206ENST00000489142 A0A1B0GW54 56 aa6.93□□□□□ -1.3
VTI1A-206ENST00000489142 MT2AP02795 61 aa6.93□□□□□ -1.3
VTI1A-206ENST00000489142 C9orf118A6NHY6 69 aa6.92□□□□□ -1.3
VTI1A-206ENST00000489142 NREPQ16612 68 aa6.92□□□□□ -1.3
VTI1A-206ENST00000489142 TAX1BP3O14907 124 aa6.91□□□□□ -1.3
VTI1A-206ENST00000489142 Q6ZVQ6 151 aa6.91□□□□□ -1.3
VTI1A-206ENST00000489142 MT1FP04733 61 aa6.9□□□□□ -1.3
VTI1A-206ENST00000489142 PRR15Q8IV56 129 aa6.9□□□□□ -1.3
VTI1A-206ENST00000489142 A0A1W2PPM0 123 aa6.89□□□□□ -1.31
VTI1A-206ENST00000489142 MMP24-AS1A0A0U1RRL7 71 aa6.88□□□□□ -1.31
VTI1A-206ENST00000489142 SMCPP49901 116 aaPredicted RBP6.88□□□□□ -1.31
VTI1A-206ENST00000489142 H3BT86 120 aa6.87□□□□□ -1.31
VTI1A-206ENST00000489142 WFDC13Q8IUB5 93 aa6.87□□□□□ -1.31
VTI1A-206ENST00000489142 K7EQZ3 153 aa6.86□□□□□ -1.31
VTI1A-206ENST00000489142 KRTAP10-10P60014 251 aa6.85□□□□□ -1.31
VTI1A-206ENST00000489142 TMEM254Q8TBM7 123 aa6.84□□□□□ -1.31
VTI1A-206ENST00000489142 MRPL34Q9BQ48 92 aaKnown RBP6.84□□□□□ -1.31
VTI1A-206ENST00000489142 hDV103S1A0JD37 113 aa6.82□□□□□ -1.32
VTI1A-206ENST00000489142 NDUFS5O43920 106 aa6.82□□□□□ -1.32
VTI1A-206ENST00000489142 USH2AO75445 5202 aa6.81□□□□□ -1.32
VTI1A-206ENST00000489142 COL5A1-AS1Q5SY13 56 aa6.81□□□□□ -1.32
VTI1A-206ENST00000489142 PCP4L1A6NKN8 68 aa6.8□□□□□ -1.32
VTI1A-206ENST00000489142 KRTAP9-3Q9BYQ3 159 aa6.8□□□□□ -1.32
VTI1A-206ENST00000489142 SPCS1Q9Y6A9 102 aa6.8□□□□□ -1.32
VTI1A-206ENST00000489142 BPY2O14599 106 aa6.79□□□□□ -1.32
VTI1A-206ENST00000489142 PCP4P48539 62 aa6.79□□□□□ -1.32
VTI1A-206ENST00000489142 Q8N9L7 120 aa6.79□□□□□ -1.32
VTI1A-206ENST00000489142 SSPOA2VEC9 5147 aa6.76□□□□□ -1.33
VTI1A-206ENST00000489142 Q5W150 140 aa6.75□□□□□ -1.33
VTI1A-206ENST00000489142 IGKV2D-30A0A075B6S6 120 aa6.74□□□□□ -1.33
VTI1A-206ENST00000489142 IGKV2-30P06310 120 aa6.74□□□□□ -1.33
VTI1A-206ENST00000489142 CASC2Q6XLA1 102 aa6.72□□□□□ -1.33
VTI1A-206ENST00000489142 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.7□□□□□ -1.34
VTI1A-206ENST00000489142 HCG22E2RYF7 251 aa6.7□□□□□ -1.34
VTI1A-206ENST00000489142 KRTAP19-1Q8IUB9 90 aa6.7□□□□□ -1.34
VTI1A-206ENST00000489142 PRO0461Q9UI25 63 aa6.7□□□□□ -1.34
VTI1A-206ENST00000489142 H1FX-AS1Q4G0G2 97 aa6.69□□□□□ -1.34
VTI1A-206ENST00000489142 LINC00846Q9NV44 126 aa6.69□□□□□ -1.34
VTI1A-206ENST00000489142 K7EP34 96 aa6.68□□□□□ -1.34
VTI1A-206ENST00000489142 C7orf65Q6ZTY9 151 aa6.68□□□□□ -1.34
VTI1A-206ENST00000489142 GTF2H5Q6ZYL4 71 aa6.67□□□□□ -1.34
VTI1A-206ENST00000489142 UBL5Q9BZL1 73 aa6.64□□□□□ -1.35
VTI1A-206ENST00000489142 C4orf26Q17RF5 130 aa6.63□□□□□ -1.35
VTI1A-206ENST00000489142 FCGBPQ9Y6R7 5405 aaPredicted RBP6.61□□□□□ -1.35
VTI1A-206ENST00000489142 KRTAP9-7A8MTY7 169 aa6.61□□□□□ -1.35
VTI1A-206ENST00000489142 CXCL6P80162 114 aa6.61□□□□□ -1.35
VTI1A-206ENST00000489142 F8W1H4 67 aa6.59□□□□□ -1.35
VTI1A-206ENST00000489142 ETDBQ3ZM63 59 aa6.54□□□□□ -1.36
VTI1A-206ENST00000489142 KRTAP4-8Q9BYQ9 185 aa6.54□□□□□ -1.36
VTI1A-206ENST00000489142 KRTAP19-6Q3LI70 58 aa6.52□□□□□ -1.37
VTI1A-206ENST00000489142 C5orf47Q569G3 176 aa6.52□□□□□ -1.37
VTI1A-206ENST00000489142 KRTAP3-1Q9BYR8 98 aa6.52□□□□□ -1.37
VTI1A-206ENST00000489142 C1orf64Q8NEQ6 169 aa6.48□□□□□ -1.37
VTI1A-206ENST00000489142 S4R3F8 94 aa6.47□□□□□ -1.37
VTI1A-206ENST00000489142 TP53AIP1Q9HCN2 124 aa6.45□□□□□ -1.38
VTI1A-206ENST00000489142 LCA10Q71F78 164 aa6.44□□□□□ -1.38
VTI1A-206ENST00000489142 FAM236AA0A1B0GUQ0 79 aa6.43□□□□□ -1.38
VTI1A-206ENST00000489142 FAM236BA0A1B0GV22 79 aa6.43□□□□□ -1.38
VTI1A-206ENST00000489142 MACF1Q9UPN3 7388 aaKnown RBP6.39□□□□□ -1.39
VTI1A-206ENST00000489142 A0A1B0GV90 55 aa6.39□□□□□ -1.39
VTI1A-206ENST00000489142 CSAG1Q6PB30 78 aa6.39□□□□□ -1.39
VTI1A-206ENST00000489142 ACYP1P07311 99 aa6.38□□□□□ -1.39
VTI1A-206ENST00000489142 CYP4F30PQ9H0H9 118 aa6.38□□□□□ -1.39
VTI1A-206ENST00000489142 A0A087WVE0 104 aa6.34□□□□□ -1.39
VTI1A-206ENST00000489142 TRAV22A0A0B4J277 110 aa6.34□□□□□ -1.39
VTI1A-206ENST00000489142 HIST1H4AP62805 103 aaKnown RBP6.33□□□□□ -1.4
VTI1A-206ENST00000489142 SYNE2Q8WXH0 6885 aaKnown RBP6.33□□□□□ -1.4
VTI1A-206ENST00000489142 FAM240AA0A1B0GVK7 77 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms