RNA–Protein interactions for RNA: ENST00000488865.2

RNF220-216, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-216ENST00000488865 KRTAP9-3Q9BYQ3 159 aa12.83□□□□□ -0.36
RNF220-216ENST00000488865 A0A1B0GVX0 72 aa12.82□□□□□ -0.36
RNF220-216ENST00000488865 KRTAP10-10P60014 251 aa12.82□□□□□ -0.36
RNF220-216ENST00000488865 MTURNQ8N3F0 131 aa12.79□□□□□ -0.36
RNF220-216ENST00000488865 VPS25Q9BRG1 176 aa12.77□□□□□ -0.37
RNF220-216ENST00000488865 RBM3P98179 157 aaKnown RBP12.76□□□□□ -0.37
RNF220-216ENST00000488865 KRTAP19-1Q8IUB9 90 aa12.76□□□□□ -0.37
RNF220-216ENST00000488865 ZCCHC13Q8WW36 166 aaKnown RBP12.75□□□□□ -0.37
RNF220-216ENST00000488865 DSCR8Q96T75 97 aa12.74□□□□□ -0.37
RNF220-216ENST00000488865 FCGBPQ9Y6R7 5405 aaPredicted RBP12.74□□□□□ -0.37
RNF220-216ENST00000488865 J3KT08 172 aa12.72□□□□□ -0.37
RNF220-216ENST00000488865 C21orf62-AS1Q17RA5 79 aa12.71□□□□□ -0.37
RNF220-216ENST00000488865 PYY3Q5JQD4 70 aa12.71□□□□□ -0.37
RNF220-216ENST00000488865 SPINK7P58062 85 aa12.7□□□□□ -0.38
RNF220-216ENST00000488865 SCGB1C2P0DMR2 95 aa12.67□□□□□ -0.38
RNF220-216ENST00000488865 C9JAW5 83 aa12.64□□□□□ -0.39
RNF220-216ENST00000488865 Q8N9P0 234 aaPredicted RBP12.64□□□□□ -0.39
RNF220-216ENST00000488865 UQCR10Q9UDW1 63 aa12.64□□□□□ -0.39
RNF220-216ENST00000488865 Q6ZQT0 140 aa12.63□□□□□ -0.39
RNF220-216ENST00000488865 NDUFB1O75438 58 aa12.61□□□□□ -0.39
RNF220-216ENST00000488865 BAALC-AS2P0C853 105 aa12.61□□□□□ -0.39
RNF220-216ENST00000488865 A8MWP4 228 aa12.53□□□□□ -0.4
RNF220-216ENST00000488865 C8orf17Q9NRJ1 99 aa12.53□□□□□ -0.4
RNF220-216ENST00000488865 A0A1B0GW54 56 aa12.52□□□□□ -0.41
RNF220-216ENST00000488865 WFDC13Q8IUB5 93 aa12.52□□□□□ -0.41
RNF220-216ENST00000488865 LINC00846Q9NV44 126 aa12.52□□□□□ -0.41
RNF220-216ENST00000488865 LYRM7Q5U5X0 104 aa12.5□□□□□ -0.41
RNF220-216ENST00000488865 JMJD7-PLA2G4BH0Y9G9 81 aa12.48□□□□□ -0.41
RNF220-216ENST00000488865 KRTAP19-6Q3LI70 58 aa12.47□□□□□ -0.41
RNF220-216ENST00000488865 LOC110117498A0A087WWA1 95 aa12.46□□□□□ -0.41
RNF220-216ENST00000488865 IGKV3D-7A0A0C4DH55 119 aa12.46□□□□□ -0.41
RNF220-216ENST00000488865 MACF1Q9UPN3 7388 aaKnown RBP12.44□□□□□ -0.42
RNF220-216ENST00000488865 Q6ZVQ6 151 aa12.43□□□□□ -0.42
RNF220-216ENST00000488865 PDE6GP18545 87 aa12.42□□□□□ -0.42
RNF220-216ENST00000488865 ATXN8Q156A1 80 aa12.42□□□□□ -0.42
RNF220-216ENST00000488865 PRR15Q8IV56 129 aa12.38□□□□□ -0.43
RNF220-216ENST00000488865 C14orf132Q9NPU4 83 aa12.33□□□□□ -0.44
RNF220-216ENST00000488865 TMEM254Q8TBM7 123 aa12.32□□□□□ -0.44
RNF220-216ENST00000488865 NREPQ16612 68 aa12.31□□□□□ -0.44
RNF220-216ENST00000488865 MRPL34Q9BQ48 92 aaKnown RBP12.31□□□□□ -0.44
RNF220-216ENST00000488865 NAA38Q9BRA0 125 aaKnown RBP12.31□□□□□ -0.44
RNF220-216ENST00000488865 H1FX-AS1Q4G0G2 97 aa12.3□□□□□ -0.44
RNF220-216ENST00000488865 MMP24-AS1A0A0U1RRL7 71 aa12.29□□□□□ -0.44
RNF220-216ENST00000488865 M0R143 59 aa12.29□□□□□ -0.44
RNF220-216ENST00000488865 SYNE2Q8WXH0 6885 aaKnown RBP12.29□□□□□ -0.44
RNF220-216ENST00000488865 TMA7Q9Y2S6 64 aaKnown RBP12.28□□□□□ -0.44
RNF220-216ENST00000488865 hDV103S1A0JD37 113 aa12.21□□□□□ -0.45
RNF220-216ENST00000488865 NDUFS5O43920 106 aa12.18□□□□□ -0.46
RNF220-216ENST00000488865 K7EQZ3 153 aa12.17□□□□□ -0.46
RNF220-216ENST00000488865 IGKV2D-30A0A075B6S6 120 aa12.11□□□□□ -0.47
RNF220-216ENST00000488865 IGKV2-30P06310 120 aa12.11□□□□□ -0.47
RNF220-216ENST00000488865 C7orf65Q6ZTY9 151 aa12.11□□□□□ -0.47
RNF220-216ENST00000488865 KRTAP6-3Q3LI67 103 aa12.08□□□□□ -0.48
RNF220-216ENST00000488865 Q5W150 140 aa12.07□□□□□ -0.48
RNF220-216ENST00000488865 BPY2O14599 106 aa12.05□□□□□ -0.48
RNF220-216ENST00000488865 H3BT86 120 aa12.02□□□□□ -0.49
RNF220-216ENST00000488865 CASC2Q6XLA1 102 aa11.96□□□□□ -0.49
RNF220-216ENST00000488865 C4orf26Q17RF5 130 aa11.95□□□□□ -0.5
RNF220-216ENST00000488865 HCG22E2RYF7 251 aa11.93□□□□□ -0.5
RNF220-216ENST00000488865 SMIM6P0DI80 62 aa11.93□□□□□ -0.5
RNF220-216ENST00000488865 BATFQ16520 125 aa11.93□□□□□ -0.5
RNF220-216ENST00000488865 C9orf118A6NHY6 69 aa11.91□□□□□ -0.5
RNF220-216ENST00000488865 Q8N9L7 120 aa11.91□□□□□ -0.5
RNF220-216ENST00000488865 CXCL6P80162 114 aa11.89□□□□□ -0.51
RNF220-216ENST00000488865 TSTD3H0UI37 97 aa11.88□□□□□ -0.51
RNF220-216ENST00000488865 A0A1W2PPM0 123 aa11.86□□□□□ -0.51
RNF220-216ENST00000488865 C5orf47Q569G3 176 aa11.84□□□□□ -0.51
RNF220-216ENST00000488865 FAM236AA0A1B0GUQ0 79 aa11.81□□□□□ -0.52
RNF220-216ENST00000488865 FAM236BA0A1B0GV22 79 aa11.81□□□□□ -0.52
RNF220-216ENST00000488865 TAX1BP3O14907 124 aa11.81□□□□□ -0.52
RNF220-216ENST00000488865 KRTAP3-1Q9BYR8 98 aa11.77□□□□□ -0.53
RNF220-216ENST00000488865 A6NN06 94 aa11.75□□□□□ -0.53
RNF220-216ENST00000488865 S4R3F8 94 aa11.75□□□□□ -0.53
RNF220-216ENST00000488865 MT1BP07438 61 aa11.74□□□□□ -0.53
RNF220-216ENST00000488865 CSAG1Q6PB30 78 aa11.73□□□□□ -0.53
RNF220-216ENST00000488865 Q5VV11 94 aa11.72□□□□□ -0.53
RNF220-216ENST00000488865 SPRR2GQ9BYE4 73 aa11.71□□□□□ -0.53
RNF220-216ENST00000488865 KRTAP19-8Q3LI54 63 aa11.69□□□□□ -0.54
RNF220-216ENST00000488865 C1orf64Q8NEQ6 169 aa11.69□□□□□ -0.54
RNF220-216ENST00000488865 UBL5Q9BZL1 73 aa11.68□□□□□ -0.54
RNF220-216ENST00000488865 LCA10Q71F78 164 aa11.67□□□□□ -0.54
RNF220-216ENST00000488865 SMCPP49901 116 aaPredicted RBP11.66□□□□□ -0.54
RNF220-216ENST00000488865 SPCS1Q9Y6A9 102 aa11.66□□□□□ -0.54
RNF220-216ENST00000488865 NEBP20929 6669 aa11.61□□□□□ -0.55
RNF220-216ENST00000488865 TP53AIP1Q9HCN2 124 aa11.57□□□□□ -0.56
RNF220-216ENST00000488865 KRTAP10-5P60370 271 aa11.56□□□□□ -0.56
RNF220-216ENST00000488865 LOC105371267A0A1B0GV96 52 aa11.55□□□□□ -0.56
RNF220-216ENST00000488865 KLKP1Q107X0 134 aa11.55□□□□□ -0.56
RNF220-216ENST00000488865 PRO0461Q9UI25 63 aa11.51□□□□□ -0.57
RNF220-216ENST00000488865 MUC12Q9UKN1 5478 aa11.48□□□□□ -0.57
RNF220-216ENST00000488865 KRTAP3-3Q9BYR6 98 aa11.48□□□□□ -0.57
RNF220-216ENST00000488865 CRIPTQ9P021 101 aa11.4□□□□□ -0.58
RNF220-216ENST00000488865 K7EP34 96 aa11.39□□□□□ -0.59
RNF220-216ENST00000488865 KRTAP5-9P26371 169 aa11.39□□□□□ -0.59
RNF220-216ENST00000488865 CYP4F30PQ9H0H9 118 aa11.39□□□□□ -0.59
RNF220-216ENST00000488865 COL5A1-AS1Q5SY13 56 aa11.37□□□□□ -0.59
RNF220-216ENST00000488865 KRTAP20-1Q3LI63 56 aa11.33□□□□□ -0.6
RNF220-216ENST00000488865 A0A087WVE0 104 aa11.3□□□□□ -0.6
RNF220-216ENST00000488865 IMUPQ9GZP8 106 aa11.29□□□□□ -0.6
RNF220-216ENST00000488865 LOC101927531A0A1B0GV80 90 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms