RNA–Protein interactions for RNA: ENST00000487266.1

GABPA-203, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

TSL 2

Gene GABPA, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-203ENST00000487266 FSIP2Q5CZC0 6907 aa8.11□□□□□ -1.11
GABPA-203ENST00000487266 A0A1B0GVX0 72 aa8.09□□□□□ -1.11
GABPA-203ENST00000487266 TSTD3H0UI37 97 aa8.09□□□□□ -1.11
GABPA-203ENST00000487266 Q6ZQT0 140 aa8.09□□□□□ -1.11
GABPA-203ENST00000487266 LOC105371267A0A1B0GV96 52 aa8.07□□□□□ -1.12
GABPA-203ENST00000487266 C14orf132Q9NPU4 83 aa8.06□□□□□ -1.12
GABPA-203ENST00000487266 LOC110117498A0A087WWA1 95 aa8.05□□□□□ -1.12
GABPA-203ENST00000487266 TRBV20-1A0A075B6N2 111 aa8.04□□□□□ -1.12
GABPA-203ENST00000487266 C8orf87E5RJ46 101 aa8.04□□□□□ -1.12
GABPA-203ENST00000487266 JMJD7-PLA2G4BH0Y9G9 81 aa8.04□□□□□ -1.12
GABPA-203ENST00000487266 LYRM7Q5U5X0 104 aa8.02□□□□□ -1.13
GABPA-203ENST00000487266 MTURNQ8N3F0 131 aa8.02□□□□□ -1.13
GABPA-203ENST00000487266 J3KT08 172 aa8.01□□□□□ -1.13
GABPA-203ENST00000487266 HRES1P13985 223 aa8□□□□□ -1.13
GABPA-203ENST00000487266 CRCT1Q9UGL9 99 aa8□□□□□ -1.13
GABPA-203ENST00000487266 TAX1BP3O14907 124 aa7.99□□□□□ -1.13
GABPA-203ENST00000487266 C21orf62-AS1Q17RA5 79 aa7.99□□□□□ -1.13
GABPA-203ENST00000487266 C9orf118A6NHY6 69 aa7.98□□□□□ -1.13
GABPA-203ENST00000487266 IGKV3D-7A0A0C4DH55 119 aa7.96□□□□□ -1.14
GABPA-203ENST00000487266 FAM236DA0A1B0GTK5 79 aa7.96□□□□□ -1.14
GABPA-203ENST00000487266 A8MWP4 228 aa7.96□□□□□ -1.14
GABPA-203ENST00000487266 FAM236CP0DP71 79 aa7.96□□□□□ -1.14
GABPA-203ENST00000487266 PDE6GP18545 87 aa7.96□□□□□ -1.14
GABPA-203ENST00000487266 MPLKIPQ8TAP9 179 aa7.96□□□□□ -1.14
GABPA-203ENST00000487266 A0A1W2PPM0 123 aa7.95□□□□□ -1.14
GABPA-203ENST00000487266 NDUFB1O75438 58 aa7.95□□□□□ -1.14
GABPA-203ENST00000487266 ZCCHC13Q8WW36 166 aaKnown RBP7.95□□□□□ -1.14
GABPA-203ENST00000487266 C8orf17Q9NRJ1 99 aa7.95□□□□□ -1.14
GABPA-203ENST00000487266 A0A1B0GW54 56 aa7.93□□□□□ -1.14
GABPA-203ENST00000487266 H3BT86 120 aa7.92□□□□□ -1.14
GABPA-203ENST00000487266 Q8N9P0 234 aaPredicted RBP7.92□□□□□ -1.14
GABPA-203ENST00000487266 KRTAP9-8Q9BYQ0 159 aa7.91□□□□□ -1.14
GABPA-203ENST00000487266 RBM12B-AS1Q9P1G2 102 aa7.91□□□□□ -1.14
GABPA-203ENST00000487266 NREPQ16612 68 aa7.9□□□□□ -1.14
GABPA-203ENST00000487266 PRR15Q8IV56 129 aa7.89□□□□□ -1.15
GABPA-203ENST00000487266 SPINK7P58062 85 aa7.88□□□□□ -1.15
GABPA-203ENST00000487266 Q6ZVQ6 151 aa7.88□□□□□ -1.15
GABPA-203ENST00000487266 MMP24-AS1A0A0U1RRL7 71 aa7.87□□□□□ -1.15
GABPA-203ENST00000487266 SPCS1Q9Y6A9 102 aa7.86□□□□□ -1.15
GABPA-203ENST00000487266 K7EQZ3 153 aa7.85□□□□□ -1.15
GABPA-203ENST00000487266 SMCPP49901 116 aaPredicted RBP7.84□□□□□ -1.15
GABPA-203ENST00000487266 MT2AP02795 61 aa7.82□□□□□ -1.16
GABPA-203ENST00000487266 LOC100996750A0A140TA64 210 aa7.81□□□□□ -1.16
GABPA-203ENST00000487266 TMEM254Q8TBM7 123 aa7.81□□□□□ -1.16
GABPA-203ENST00000487266 MRPL34Q9BQ48 92 aaKnown RBP7.81□□□□□ -1.16
GABPA-203ENST00000487266 KRTAP4-6Q9BYQ5 205 aa7.81□□□□□ -1.16
GABPA-203ENST00000487266 WFDC13Q8IUB5 93 aa7.8□□□□□ -1.16
GABPA-203ENST00000487266 MT1FP04733 61 aa7.78□□□□□ -1.16
GABPA-203ENST00000487266 Q8N9L7 120 aa7.78□□□□□ -1.16
GABPA-203ENST00000487266 USH2AO75445 5202 aa7.78□□□□□ -1.16
GABPA-203ENST00000487266 hDV103S1A0JD37 113 aa7.77□□□□□ -1.17
GABPA-203ENST00000487266 BPY2O14599 106 aa7.77□□□□□ -1.17
GABPA-203ENST00000487266 NDUFS5O43920 106 aa7.76□□□□□ -1.17
GABPA-203ENST00000487266 COL5A1-AS1Q5SY13 56 aa7.75□□□□□ -1.17
GABPA-203ENST00000487266 PRO0461Q9UI25 63 aa7.75□□□□□ -1.17
GABPA-203ENST00000487266 K7EP34 96 aa7.73□□□□□ -1.17
GABPA-203ENST00000487266 SSPOA2VEC9 5147 aa7.7□□□□□ -1.18
GABPA-203ENST00000487266 Q5W150 140 aa7.69□□□□□ -1.18
GABPA-203ENST00000487266 KRTAP10-10P60014 251 aa7.68□□□□□ -1.18
GABPA-203ENST00000487266 LINC00846Q9NV44 126 aa7.68□□□□□ -1.18
GABPA-203ENST00000487266 CASC2Q6XLA1 102 aa7.67□□□□□ -1.18
GABPA-203ENST00000487266 IGKV2D-30A0A075B6S6 120 aa7.66□□□□□ -1.18
GABPA-203ENST00000487266 IGKV2-30P06310 120 aa7.66□□□□□ -1.18
GABPA-203ENST00000487266 KRTAP9-3Q9BYQ3 159 aa7.66□□□□□ -1.18
GABPA-203ENST00000487266 HCG22E2RYF7 251 aa7.65□□□□□ -1.18
GABPA-203ENST00000487266 PCP4L1A6NKN8 68 aa7.64□□□□□ -1.19
GABPA-203ENST00000487266 UBL5Q9BZL1 73 aa7.62□□□□□ -1.19
GABPA-203ENST00000487266 C7orf65Q6ZTY9 151 aa7.61□□□□□ -1.19
GABPA-203ENST00000487266 H1FX-AS1Q4G0G2 97 aa7.57□□□□□ -1.2
GABPA-203ENST00000487266 GTF2H5Q6ZYL4 71 aa7.57□□□□□ -1.2
GABPA-203ENST00000487266 CXCL6P80162 114 aa7.55□□□□□ -1.2
GABPA-203ENST00000487266 ETDBQ3ZM63 59 aa7.55□□□□□ -1.2
GABPA-203ENST00000487266 C4orf26Q17RF5 130 aa7.53□□□□□ -1.2
GABPA-203ENST00000487266 F8W1H4 67 aa7.52□□□□□ -1.21
GABPA-203ENST00000487266 KRTAP19-1Q8IUB9 90 aa7.5□□□□□ -1.21
GABPA-203ENST00000487266 FCGBPQ9Y6R7 5405 aaPredicted RBP7.49□□□□□ -1.21
GABPA-203ENST00000487266 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.47□□□□□ -1.21
GABPA-203ENST00000487266 KRTAP3-1Q9BYR8 98 aa7.43□□□□□ -1.22
GABPA-203ENST00000487266 C5orf47Q569G3 176 aa7.38□□□□□ -1.23
GABPA-203ENST00000487266 TP53AIP1Q9HCN2 124 aa7.38□□□□□ -1.23
GABPA-203ENST00000487266 C1orf64Q8NEQ6 169 aa7.36□□□□□ -1.23
GABPA-203ENST00000487266 KRTAP9-7A8MTY7 169 aa7.35□□□□□ -1.23
GABPA-203ENST00000487266 S4R3F8 94 aa7.34□□□□□ -1.23
GABPA-203ENST00000487266 KRTAP19-6Q3LI70 58 aa7.33□□□□□ -1.24
GABPA-203ENST00000487266 LCA10Q71F78 164 aa7.31□□□□□ -1.24
GABPA-203ENST00000487266 FAM240AA0A1B0GVK7 77 aa7.3□□□□□ -1.24
GABPA-203ENST00000487266 ACYP1P07311 99 aa7.3□□□□□ -1.24
GABPA-203ENST00000487266 MACF1Q9UPN3 7388 aaKnown RBP7.29□□□□□ -1.24
GABPA-203ENST00000487266 HIST1H4AP62805 103 aaKnown RBP7.28□□□□□ -1.24
GABPA-203ENST00000487266 CYP4F30PQ9H0H9 118 aa7.28□□□□□ -1.24
GABPA-203ENST00000487266 TRAV22A0A0B4J277 110 aa7.27□□□□□ -1.25
GABPA-203ENST00000487266 ATP5EP2Q5VTU8 51 aa7.27□□□□□ -1.25
GABPA-203ENST00000487266 FAM236AA0A1B0GUQ0 79 aa7.26□□□□□ -1.25
GABPA-203ENST00000487266 FAM236BA0A1B0GV22 79 aa7.26□□□□□ -1.25
GABPA-203ENST00000487266 A0A087WVE0 104 aa7.23□□□□□ -1.25
GABPA-203ENST00000487266 CSAG1Q6PB30 78 aa7.23□□□□□ -1.25
GABPA-203ENST00000487266 A0A1B0GV90 55 aa7.22□□□□□ -1.25
GABPA-203ENST00000487266 SYNE2Q8WXH0 6885 aaKnown RBP7.21□□□□□ -1.25
GABPA-203ENST00000487266 LOC101927531A0A1B0GV80 90 aa7.21□□□□□ -1.26
GABPA-203ENST00000487266 H0Y9P7 68 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms