RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 SCGB1C2P0DMR2 95 aa12.78□□□□□ -0.36
HLA-F-227ENST00000485513 DSCR8Q96T75 97 aa12.78□□□□□ -0.36
HLA-F-227ENST00000485513 SSPOA2VEC9 5147 aa12.75□□□□□ -0.37
HLA-F-227ENST00000485513 J3KT08 172 aa12.7□□□□□ -0.38
HLA-F-227ENST00000485513 MT1FP04733 61 aa12.7□□□□□ -0.38
HLA-F-227ENST00000485513 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.69□□□□□ -0.38
HLA-F-227ENST00000485513 C9JAW5 83 aa12.69□□□□□ -0.38
HLA-F-227ENST00000485513 BAALC-AS2P0C853 105 aa12.69□□□□□ -0.38
HLA-F-227ENST00000485513 C21orf62-AS1Q17RA5 79 aa12.69□□□□□ -0.38
HLA-F-227ENST00000485513 ZCCHC13Q8WW36 166 aaKnown RBP12.68□□□□□ -0.38
HLA-F-227ENST00000485513 KRTAP10-10P60014 251 aa12.66□□□□□ -0.38
HLA-F-227ENST00000485513 MTURNQ8N3F0 131 aa12.66□□□□□ -0.38
HLA-F-227ENST00000485513 Q6ZQT0 140 aa12.64□□□□□ -0.39
HLA-F-227ENST00000485513 SPINK7P58062 85 aa12.62□□□□□ -0.39
HLA-F-227ENST00000485513 KRTAP9-7A8MTY7 169 aa12.61□□□□□ -0.39
HLA-F-227ENST00000485513 LCE2BO14633 110 aa12.61□□□□□ -0.39
HLA-F-227ENST00000485513 NDUFB1O75438 58 aa12.61□□□□□ -0.39
HLA-F-227ENST00000485513 KRTAP9-3Q9BYQ3 159 aa12.61□□□□□ -0.39
HLA-F-227ENST00000485513 TMA7Q9Y2S6 64 aaKnown RBP12.59□□□□□ -0.39
HLA-F-227ENST00000485513 Q8N9P0 234 aaPredicted RBP12.58□□□□□ -0.4
HLA-F-227ENST00000485513 C8orf17Q9NRJ1 99 aa12.53□□□□□ -0.4
HLA-F-227ENST00000485513 JMJD7-PLA2G4BH0Y9G9 81 aa12.52□□□□□ -0.41
HLA-F-227ENST00000485513 ATXN8Q156A1 80 aa12.52□□□□□ -0.41
HLA-F-227ENST00000485513 FCGBPQ9Y6R7 5405 aaPredicted RBP12.51□□□□□ -0.41
HLA-F-227ENST00000485513 A8MWP4 228 aa12.51□□□□□ -0.41
HLA-F-227ENST00000485513 LYRM7Q5U5X0 104 aa12.51□□□□□ -0.41
HLA-F-227ENST00000485513 KRTAP19-1Q8IUB9 90 aa12.51□□□□□ -0.41
HLA-F-227ENST00000485513 LOC110117498A0A087WWA1 95 aa12.5□□□□□ -0.41
HLA-F-227ENST00000485513 A0A1B0GW54 56 aa12.5□□□□□ -0.41
HLA-F-227ENST00000485513 NAA38Q9BRA0 125 aaKnown RBP12.48□□□□□ -0.41
HLA-F-227ENST00000485513 IGKV3D-7A0A0C4DH55 119 aa12.47□□□□□ -0.41
HLA-F-227ENST00000485513 WFDC13Q8IUB5 93 aa12.46□□□□□ -0.41
HLA-F-227ENST00000485513 M0R143 59 aa12.45□□□□□ -0.42
HLA-F-227ENST00000485513 PDE6GP18545 87 aa12.45□□□□□ -0.42
HLA-F-227ENST00000485513 Q6ZVQ6 151 aa12.43□□□□□ -0.42
HLA-F-227ENST00000485513 C14orf132Q9NPU4 83 aa12.41□□□□□ -0.42
HLA-F-227ENST00000485513 PRR15Q8IV56 129 aa12.38□□□□□ -0.43
HLA-F-227ENST00000485513 NREPQ16612 68 aa12.36□□□□□ -0.43
HLA-F-227ENST00000485513 MMP24-AS1A0A0U1RRL7 71 aa12.3□□□□□ -0.44
HLA-F-227ENST00000485513 TMEM254Q8TBM7 123 aa12.3□□□□□ -0.44
HLA-F-227ENST00000485513 MRPL34Q9BQ48 92 aaKnown RBP12.3□□□□□ -0.44
HLA-F-227ENST00000485513 LINC00846Q9NV44 126 aa12.26□□□□□ -0.45
HLA-F-227ENST00000485513 hDV103S1A0JD37 113 aa12.22□□□□□ -0.45
HLA-F-227ENST00000485513 KRTAP19-6Q3LI70 58 aa12.22□□□□□ -0.45
HLA-F-227ENST00000485513 K7EQZ3 153 aa12.21□□□□□ -0.45
HLA-F-227ENST00000485513 NDUFS5O43920 106 aa12.21□□□□□ -0.45
HLA-F-227ENST00000485513 H1FX-AS1Q4G0G2 97 aa12.2□□□□□ -0.46
HLA-F-227ENST00000485513 SMIM6P0DI80 62 aa12.16□□□□□ -0.46
HLA-F-227ENST00000485513 BATFQ16520 125 aa12.15□□□□□ -0.46
HLA-F-227ENST00000485513 H3BT86 120 aa12.12□□□□□ -0.47
HLA-F-227ENST00000485513 MACF1Q9UPN3 7388 aaKnown RBP12.12□□□□□ -0.47
HLA-F-227ENST00000485513 IGKV2D-30A0A075B6S6 120 aa12.11□□□□□ -0.47
HLA-F-227ENST00000485513 BPY2O14599 106 aa12.11□□□□□ -0.47
HLA-F-227ENST00000485513 IGKV2-30P06310 120 aa12.11□□□□□ -0.47
HLA-F-227ENST00000485513 C7orf65Q6ZTY9 151 aa12.08□□□□□ -0.48
HLA-F-227ENST00000485513 TSTD3H0UI37 97 aa12.07□□□□□ -0.48
HLA-F-227ENST00000485513 Q5W150 140 aa12.07□□□□□ -0.48
HLA-F-227ENST00000485513 C9orf118A6NHY6 69 aa12.05□□□□□ -0.48
HLA-F-227ENST00000485513 A0A1W2PPM0 123 aa12.02□□□□□ -0.49
HLA-F-227ENST00000485513 SYNE2Q8WXH0 6885 aaKnown RBP11.99□□□□□ -0.49
HLA-F-227ENST00000485513 TAX1BP3O14907 124 aa11.99□□□□□ -0.49
HLA-F-227ENST00000485513 CASC2Q6XLA1 102 aa11.99□□□□□ -0.49
HLA-F-227ENST00000485513 Q8N9L7 120 aa11.99□□□□□ -0.49
HLA-F-227ENST00000485513 HCG22E2RYF7 251 aa11.97□□□□□ -0.49
HLA-F-227ENST00000485513 C4orf26Q17RF5 130 aa11.93□□□□□ -0.5
HLA-F-227ENST00000485513 CXCL6P80162 114 aa11.89□□□□□ -0.51
HLA-F-227ENST00000485513 SPCS1Q9Y6A9 102 aa11.83□□□□□ -0.52
HLA-F-227ENST00000485513 C5orf47Q569G3 176 aa11.8□□□□□ -0.52
HLA-F-227ENST00000485513 SMCPP49901 116 aaPredicted RBP11.79□□□□□ -0.52
HLA-F-227ENST00000485513 KRTAP6-3Q3LI67 103 aa11.78□□□□□ -0.52
HLA-F-227ENST00000485513 UBL5Q9BZL1 73 aa11.77□□□□□ -0.53
HLA-F-227ENST00000485513 FAM236AA0A1B0GUQ0 79 aa11.74□□□□□ -0.53
HLA-F-227ENST00000485513 FAM236BA0A1B0GV22 79 aa11.74□□□□□ -0.53
HLA-F-227ENST00000485513 KRTAP3-1Q9BYR8 98 aa11.73□□□□□ -0.53
HLA-F-227ENST00000485513 S4R3F8 94 aa11.71□□□□□ -0.53
HLA-F-227ENST00000485513 LOC105371267A0A1B0GV96 52 aa11.69□□□□□ -0.54
HLA-F-227ENST00000485513 C1orf64Q8NEQ6 169 aa11.67□□□□□ -0.54
HLA-F-227ENST00000485513 CSAG1Q6PB30 78 aa11.65□□□□□ -0.54
HLA-F-227ENST00000485513 PRO0461Q9UI25 63 aa11.65□□□□□ -0.54
HLA-F-227ENST00000485513 LCA10Q71F78 164 aa11.62□□□□□ -0.55
HLA-F-227ENST00000485513 MT1BP07438 61 aa11.59□□□□□ -0.55
HLA-F-227ENST00000485513 A6NN06 94 aa11.58□□□□□ -0.56
HLA-F-227ENST00000485513 Q5VV11 94 aa11.58□□□□□ -0.56
HLA-F-227ENST00000485513 TP53AIP1Q9HCN2 124 aa11.58□□□□□ -0.56
HLA-F-227ENST00000485513 COL5A1-AS1Q5SY13 56 aa11.57□□□□□ -0.56
HLA-F-227ENST00000485513 K7EP34 96 aa11.56□□□□□ -0.56
HLA-F-227ENST00000485513 SPRR2GQ9BYE4 73 aa11.56□□□□□ -0.56
HLA-F-227ENST00000485513 KRTAP19-8Q3LI54 63 aa11.53□□□□□ -0.56
HLA-F-227ENST00000485513 KLKP1Q107X0 134 aa11.46□□□□□ -0.57
HLA-F-227ENST00000485513 KRTAP3-3Q9BYR6 98 aa11.42□□□□□ -0.58
HLA-F-227ENST00000485513 CYP4F30PQ9H0H9 118 aa11.4□□□□□ -0.58
HLA-F-227ENST00000485513 KRTAP10-5P60370 271 aa11.38□□□□□ -0.59
HLA-F-227ENST00000485513 GTF2H5Q6ZYL4 71 aa11.38□□□□□ -0.59
HLA-F-227ENST00000485513 F8W1H4 67 aa11.34□□□□□ -0.59
HLA-F-227ENST00000485513 ETDBQ3ZM63 59 aa11.34□□□□□ -0.59
HLA-F-227ENST00000485513 TRAV22A0A0B4J277 110 aa11.31□□□□□ -0.6
HLA-F-227ENST00000485513 A0A087WVE0 104 aa11.3□□□□□ -0.6
HLA-F-227ENST00000485513 NEBP20929 6669 aa11.29□□□□□ -0.6
HLA-F-227ENST00000485513 LOC101927531A0A1B0GV80 90 aa11.28□□□□□ -0.6
HLA-F-227ENST00000485513 CRIPTQ9P021 101 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms