RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 RBM3P98179 157 aaKnown RBP4.8□□□□□ -1.64
NUP50-215ENST00000484186 NAA38Q9BRA0 125 aaKnown RBP4.8□□□□□ -1.64
NUP50-215ENST00000484186 KRTAP16-1A8MUX0 517 aa4.79□□□□□ -1.64
NUP50-215ENST00000484186 JMJD7-PLA2G4BH0Y9G9 81 aa4.79□□□□□ -1.64
NUP50-215ENST00000484186 C21orf62-AS1Q17RA5 79 aa4.79□□□□□ -1.64
NUP50-215ENST00000484186 A0A1W2PPM0 123 aa4.78□□□□□ -1.64
NUP50-215ENST00000484186 CCKP06307 115 aa4.78□□□□□ -1.64
NUP50-215ENST00000484186 DEFB116Q30KQ4 102 aa4.78□□□□□ -1.64
NUP50-215ENST00000484186 COL5A1-AS1Q5SY13 56 aa4.78□□□□□ -1.64
NUP50-215ENST00000484186 DSCR8Q96T75 97 aa4.78□□□□□ -1.64
NUP50-215ENST00000484186 LINC00472Q9H8W2 130 aa4.78□□□□□ -1.64
NUP50-215ENST00000484186 PDE6GP18545 87 aa4.77□□□□□ -1.65
NUP50-215ENST00000484186 NOTCH2NLQ7Z3S9 236 aa4.77□□□□□ -1.65
NUP50-215ENST00000484186 KRTAP9-8Q9BYQ0 159 aa4.77□□□□□ -1.65
NUP50-215ENST00000484186 A0A1B0GW54 56 aa4.76□□□□□ -1.65
NUP50-215ENST00000484186 C9JAW5 83 aa4.76□□□□□ -1.65
NUP50-215ENST00000484186 IGHV6-1A0A0B4J1U7 121 aa4.75□□□□□ -1.65
NUP50-215ENST00000484186 H3BT86 120 aa4.75□□□□□ -1.65
NUP50-215ENST00000484186 LOC110117498A0A087WWA1 95 aa4.74□□□□□ -1.65
NUP50-215ENST00000484186 FAM236DA0A1B0GTK5 79 aa4.74□□□□□ -1.65
NUP50-215ENST00000484186 FAM236CP0DP71 79 aa4.74□□□□□ -1.65
NUP50-215ENST00000484186 HRES1P13985 223 aa4.73□□□□□ -1.65
NUP50-215ENST00000484186 MPLKIPQ8TAP9 179 aa4.73□□□□□ -1.65
NUP50-215ENST00000484186 VPS25Q9BRG1 176 aa4.73□□□□□ -1.65
NUP50-215ENST00000484186 RBM12B-AS1Q9P1G2 102 aa4.73□□□□□ -1.65
NUP50-215ENST00000484186 SPCS1Q9Y6A9 102 aa4.73□□□□□ -1.65
NUP50-215ENST00000484186 A0A1B0GVX0 72 aa4.72□□□□□ -1.65
NUP50-215ENST00000484186 C8orf87E5RJ46 101 aa4.72□□□□□ -1.65
NUP50-215ENST00000484186 USH2AO75445 5202 aa4.71□□□□□ -1.65
NUP50-215ENST00000484186 Q6ZQT0 140 aa4.71□□□□□ -1.66
NUP50-215ENST00000484186 PCP4L1A6NKN8 68 aa4.7□□□□□ -1.66
NUP50-215ENST00000484186 J3KT08 172 aa4.69□□□□□ -1.66
NUP50-215ENST00000484186 K7EP34 96 aa4.68□□□□□ -1.66
NUP50-215ENST00000484186 MT2AP02795 61 aa4.68□□□□□ -1.66
NUP50-215ENST00000484186 C14orf132Q9NPU4 83 aa4.68□□□□□ -1.66
NUP50-215ENST00000484186 SSPOA2VEC9 5147 aa4.68□□□□□ -1.66
NUP50-215ENST00000484186 ZCCHC13Q8WW36 166 aaKnown RBP4.67□□□□□ -1.66
NUP50-215ENST00000484186 NDUFB1O75438 58 aa4.66□□□□□ -1.66
NUP50-215ENST00000484186 GTF2H5Q6ZYL4 71 aa4.66□□□□□ -1.66
NUP50-215ENST00000484186 MTURNQ8N3F0 131 aa4.66□□□□□ -1.66
NUP50-215ENST00000484186 MT1FP04733 61 aa4.64□□□□□ -1.67
NUP50-215ENST00000484186 SPINK7P58062 85 aa4.64□□□□□ -1.67
NUP50-215ENST00000484186 Q8N9P0 234 aaPredicted RBP4.64□□□□□ -1.67
NUP50-215ENST00000484186 PRO0461Q9UI25 63 aa4.64□□□□□ -1.67
NUP50-215ENST00000484186 KRTAP10-10P60014 251 aa4.63□□□□□ -1.67
NUP50-215ENST00000484186 F8W1H4 67 aa4.62□□□□□ -1.67
NUP50-215ENST00000484186 NREPQ16612 68 aa4.62□□□□□ -1.67
NUP50-215ENST00000484186 KRTAP9-3Q9BYQ3 159 aa4.62□□□□□ -1.67
NUP50-215ENST00000484186 C8orf17Q9NRJ1 99 aa4.62□□□□□ -1.67
NUP50-215ENST00000484186 A8MWP4 228 aa4.61□□□□□ -1.67
NUP50-215ENST00000484186 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.61□□□□□ -1.67
NUP50-215ENST00000484186 IGKV3D-7A0A0C4DH55 119 aa4.6□□□□□ -1.67
NUP50-215ENST00000484186 KRTAP9-7A8MTY7 169 aa4.59□□□□□ -1.67
NUP50-215ENST00000484186 FCGBPQ9Y6R7 5405 aaPredicted RBP4.59□□□□□ -1.68
NUP50-215ENST00000484186 Q6ZVQ6 151 aa4.58□□□□□ -1.68
NUP50-215ENST00000484186 WFDC13Q8IUB5 93 aa4.57□□□□□ -1.68
NUP50-215ENST00000484186 KRTAP19-1Q8IUB9 90 aa4.57□□□□□ -1.68
NUP50-215ENST00000484186 PRR15Q8IV56 129 aa4.57□□□□□ -1.68
NUP50-215ENST00000484186 BPY2O14599 106 aa4.55□□□□□ -1.68
NUP50-215ENST00000484186 ETDBQ3ZM63 59 aa4.55□□□□□ -1.68
NUP50-215ENST00000484186 UBL5Q9BZL1 73 aa4.55□□□□□ -1.68
NUP50-215ENST00000484186 TMEM254Q8TBM7 123 aa4.54□□□□□ -1.68
NUP50-215ENST00000484186 MRPL34Q9BQ48 92 aaKnown RBP4.54□□□□□ -1.68
NUP50-215ENST00000484186 MMP24-AS1A0A0U1RRL7 71 aa4.53□□□□□ -1.68
NUP50-215ENST00000484186 LINC00846Q9NV44 126 aa4.53□□□□□ -1.68
NUP50-215ENST00000484186 hDV103S1A0JD37 113 aa4.51□□□□□ -1.69
NUP50-215ENST00000484186 K7EQZ3 153 aa4.51□□□□□ -1.69
NUP50-215ENST00000484186 NDUFS5O43920 106 aa4.5□□□□□ -1.69
NUP50-215ENST00000484186 ACYP1P07311 99 aa4.49□□□□□ -1.69
NUP50-215ENST00000484186 H1FX-AS1Q4G0G2 97 aa4.49□□□□□ -1.69
NUP50-215ENST00000484186 FAM240AA0A1B0GVK7 77 aa4.48□□□□□ -1.69
NUP50-215ENST00000484186 CXCL6P80162 114 aa4.47□□□□□ -1.69
NUP50-215ENST00000484186 KRTAP19-6Q3LI70 58 aa4.47□□□□□ -1.69
NUP50-215ENST00000484186 A0A1B0GV90 55 aa4.46□□□□□ -1.7
NUP50-215ENST00000484186 Q5W150 140 aa4.46□□□□□ -1.7
NUP50-215ENST00000484186 IGKV2D-30A0A075B6S6 120 aa4.45□□□□□ -1.7
NUP50-215ENST00000484186 IGKV2-30P06310 120 aa4.45□□□□□ -1.7
NUP50-215ENST00000484186 CASC2Q6XLA1 102 aa4.45□□□□□ -1.7
NUP50-215ENST00000484186 KRTAP4-8Q9BYQ9 185 aa4.45□□□□□ -1.7
NUP50-215ENST00000484186 C7orf65Q6ZTY9 151 aa4.44□□□□□ -1.7
NUP50-215ENST00000484186 Q8N9L7 120 aa4.44□□□□□ -1.7
NUP50-215ENST00000484186 HCG22E2RYF7 251 aa4.42□□□□□ -1.7
NUP50-215ENST00000484186 ATP5EP2Q5VTU8 51 aa4.42□□□□□ -1.7
NUP50-215ENST00000484186 MACF1Q9UPN3 7388 aaKnown RBP4.4□□□□□ -1.71
NUP50-215ENST00000484186 J3QR89 54 aa4.39□□□□□ -1.71
NUP50-215ENST00000484186 C4orf26Q17RF5 130 aa4.39□□□□□ -1.71
NUP50-215ENST00000484186 SYNE2Q8WXH0 6885 aaKnown RBP4.38□□□□□ -1.71
NUP50-215ENST00000484186 LINC00643Q86TS7 51 aa4.38□□□□□ -1.71
NUP50-215ENST00000484186 TP53AIP1Q9HCN2 124 aa4.38□□□□□ -1.71
NUP50-215ENST00000484186 C5orf47Q569G3 176 aa4.33□□□□□ -1.72
NUP50-215ENST00000484186 KRTAP3-1Q9BYR8 98 aa4.33□□□□□ -1.72
NUP50-215ENST00000484186 HIST1H4AP62805 103 aaKnown RBP4.32□□□□□ -1.72
NUP50-215ENST00000484186 KRTAP6-3Q3LI67 103 aa4.31□□□□□ -1.72
NUP50-215ENST00000484186 C1orf64Q8NEQ6 169 aa4.31□□□□□ -1.72
NUP50-215ENST00000484186 S4R3F8 94 aa4.31□□□□□ -1.72
NUP50-215ENST00000484186 FAM236AA0A1B0GUQ0 79 aa4.3□□□□□ -1.72
NUP50-215ENST00000484186 FAM236BA0A1B0GV22 79 aa4.3□□□□□ -1.72
NUP50-215ENST00000484186 CSAG1Q6PB30 78 aa4.29□□□□□ -1.72
NUP50-215ENST00000484186 TRAV22A0A0B4J277 110 aa4.27□□□□□ -1.73
NUP50-215ENST00000484186 K7ERU9 68 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms