RNA–Protein interactions for RNA: ENST00000481965.6

SEC22A-207, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3 BASIC

Gene SEC22A, Length 673 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-207ENST00000481965 LINC00474Q9P2X8 69 aa2.06□□□□□ -2.08
SEC22A-207ENST00000481965 APOBP04114 4563 aaKnown RBP2.06□□□□□ -2.08
SEC22A-207ENST00000481965 DYNC1H1Q14204 4646 aaKnown RBP2.05□□□□□ -2.08
SEC22A-207ENST00000481965 UMAD1C9J7I0 102 aa2.05□□□□□ -2.08
SEC22A-207ENST00000481965 F2Z2F3 143 aa2.05□□□□□ -2.08
SEC22A-207ENST00000481965 CRIP1P50238 77 aa2.05□□□□□ -2.08
SEC22A-207ENST00000481965 HSD52Q0P140 79 aa2.05□□□□□ -2.08
SEC22A-207ENST00000481965 C9orf116Q5BN46 136 aaPredicted RBP2.05□□□□□ -2.08
SEC22A-207ENST00000481965 S100A7L2Q5SY68 101 aa2.05□□□□□ -2.08
SEC22A-207ENST00000481965 Q86TA4 180 aa2.05□□□□□ -2.08
SEC22A-207ENST00000481965 BAGE2Q86Y30 109 aa2.05□□□□□ -2.08
SEC22A-207ENST00000481965 TSKUQ8WUA8 353 aa2.05□□□□□ -2.08
SEC22A-207ENST00000481965 MRPL35Q9NZE8 188 aaKnown RBP2.05□□□□□ -2.08
SEC22A-207ENST00000481965 DNAH5Q8TE73 4624 aa2.05□□□□□ -2.08
SEC22A-207ENST00000481965 LRP1BQ9NZR2 4599 aa2.05□□□□□ -2.08
SEC22A-207ENST00000481965 FXYD6-FXYD2A0A087WZ82 144 aa2.04□□□□□ -2.08
SEC22A-207ENST00000481965 HIGD1CA8MV81 97 aa2.04□□□□□ -2.08
SEC22A-207ENST00000481965 CCKP06307 115 aa2.04□□□□□ -2.08
SEC22A-207ENST00000481965 IFITM1P13164 125 aa2.04□□□□□ -2.08
SEC22A-207ENST00000481965 ABCA13Q86UQ4 5058 aa2.03□□□□□ -2.08
SEC22A-207ENST00000481965 MGPP08493 103 aa2.03□□□□□ -2.08
SEC22A-207ENST00000481965 Q8N8P6 123 aa2.03□□□□□ -2.08
SEC22A-207ENST00000481965 IFI27L1Q96BM0 104 aa2.03□□□□□ -2.08
SEC22A-207ENST00000481965 LINC01600Q96MT4 127 aa2.03□□□□□ -2.08
SEC22A-207ENST00000481965 MANBALQ9NQG1 85 aa2.03□□□□□ -2.08
SEC22A-207ENST00000481965 PLAC8Q9NZF1 115 aa2.03□□□□□ -2.08
SEC22A-207ENST00000481965 KANTRA0A1W2PQU2 76 aa2.02□□□□□ -2.09
SEC22A-207ENST00000481965 M0QY20 66 aa2.02□□□□□ -2.09
SEC22A-207ENST00000481965 COX6A2Q02221 97 aa2.02□□□□□ -2.09
SEC22A-207ENST00000481965 CLPSL2Q6UWE3 100 aa2.02□□□□□ -2.09
SEC22A-207ENST00000481965 SPINK6Q6UWN8 80 aa2.02□□□□□ -2.09
SEC22A-207ENST00000481965 C9orf62Q8N4C0 152 aa2.02□□□□□ -2.09
SEC22A-207ENST00000481965 FAM213BQ8TBF2 198 aa2.02□□□□□ -2.09
SEC22A-207ENST00000481965 TRBV10-3A0A0K0K1G6 114 aa2.01□□□□□ -2.09
SEC22A-207ENST00000481965 PPP1R17O96001 155 aa2.01□□□□□ -2.09
SEC22A-207ENST00000481965 MT1HL1P0DM35 61 aa2.01□□□□□ -2.09
SEC22A-207ENST00000481965 Q5BKY6 102 aa2.01□□□□□ -2.09
SEC22A-207ENST00000481965 SPTSSBQ8NFR3 76 aa2.01□□□□□ -2.09
SEC22A-207ENST00000481965 HERC1Q15751 4861 aa2.01□□□□□ -2.09
SEC22A-207ENST00000481965 MYCBP2O75592 4640 aa2□□□□□ -2.09
SEC22A-207ENST00000481965 VPS13BQ7Z7G8 4022 aa2□□□□□ -2.09
SEC22A-207ENST00000481965 GVQW2A0A096LPI5 108 aaPredicted RBP2□□□□□ -2.09
SEC22A-207ENST00000481965 TEX49A0A1B0GTD5 131 aa2□□□□□ -2.09
SEC22A-207ENST00000481965 I3L3M4 83 aa2□□□□□ -2.09
SEC22A-207ENST00000481965 SPINK8P0C7L1 97 aa2□□□□□ -2.09
SEC22A-207ENST00000481965 RBM3P98179 157 aaKnown RBP2□□□□□ -2.09
SEC22A-207ENST00000481965 GNG13Q9P2W3 67 aa2□□□□□ -2.09
SEC22A-207ENST00000481965 LINC00959A0A1B0GUT2 108 aa1.99□□□□□ -2.09
SEC22A-207ENST00000481965 M0R143 59 aa1.99□□□□□ -2.09
SEC22A-207ENST00000481965 FCER1GP30273 86 aa1.99□□□□□ -2.09
SEC22A-207ENST00000481965 C5orf38Q86SI9 138 aa1.99□□□□□ -2.09
SEC22A-207ENST00000481965 DSCR8Q96T75 97 aa1.99□□□□□ -2.09
SEC22A-207ENST00000481965 ST20Q9HBF5 79 aa1.99□□□□□ -2.09
SEC22A-207ENST00000481965 FAT1Q14517 4588 aa1.99□□□□□ -2.09
SEC22A-207ENST00000481965 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.98□□□□□ -2.09
SEC22A-207ENST00000481965 A0A096LNI7 61 aa1.98□□□□□ -2.09
SEC22A-207ENST00000481965 ATP5EP56381 51 aaPredicted RBP1.98□□□□□ -2.09
SEC22A-207ENST00000481965 CNFNQ9BYD5 112 aa1.98□□□□□ -2.09
SEC22A-207ENST00000481965 CDC42SE2Q9NRR3 84 aa1.98□□□□□ -2.09
SEC22A-207ENST00000481965 A0A1B0GUT8 65 aa1.97□□□□□ -2.09
SEC22A-207ENST00000481965 LOC101927531A0A1B0GV80 90 aa1.97□□□□□ -2.09
SEC22A-207ENST00000481965 C7orf77A4D0Y5 90 aa1.97□□□□□ -2.09
SEC22A-207ENST00000481965 POLR2KP53803 58 aaKnown RBP1.97□□□□□ -2.09
SEC22A-207ENST00000481965 RPL39LQ96EH5 51 aaKnown RBP1.97□□□□□ -2.09
SEC22A-207ENST00000481965 TRAV13-2A0A0B4J235 113 aa1.96□□□□□ -2.1
SEC22A-207ENST00000481965 NDUFA1O15239 70 aa1.96□□□□□ -2.1
SEC22A-207ENST00000481965 UBE2D1P51668 147 aa1.96□□□□□ -2.1
SEC22A-207ENST00000481965 C20orf78Q9BR46 151 aa1.96□□□□□ -2.1
SEC22A-207ENST00000481965 SPAG11BQ08648 103 aa1.95□□□□□ -2.1
SEC22A-207ENST00000481965 TRBV30A0A0K0K1B3 111 aa1.94□□□□□ -2.1
SEC22A-207ENST00000481965 HCG22E2RYF7 251 aa1.94□□□□□ -2.1
SEC22A-207ENST00000481965 Q6ZQY7 126 aa1.94□□□□□ -2.1
SEC22A-207ENST00000481965 UBE2D4Q9Y2X8 147 aa1.94□□□□□ -2.1
SEC22A-207ENST00000481965 LRP1Q07954 4544 aaKnown RBP1.94□□□□□ -2.1
SEC22A-207ENST00000481965 IFI27P40305 119 aaPredicted RBP1.93□□□□□ -2.1
SEC22A-207ENST00000481965 SEC11AP67812 179 aa1.93□□□□□ -2.1
SEC22A-207ENST00000481965 LINC01549A6NIU2 74 aa1.92□□□□□ -2.1
SEC22A-207ENST00000481965 K7EMI3 77 aa1.92□□□□□ -2.1
SEC22A-207ENST00000481965 NCR3O14931 201 aa1.92□□□□□ -2.1
SEC22A-207ENST00000481965 PEA15Q15121 130 aa1.92□□□□□ -2.1
SEC22A-207ENST00000481965 SMIM2Q9BVW6 85 aa1.92□□□□□ -2.1
SEC22A-207ENST00000481965 DNAH8Q96JB1 4490 aa1.91□□□□□ -2.1
SEC22A-207ENST00000481965 SMIM27A0A1W2PRY6 76 aa1.91□□□□□ -2.1
SEC22A-207ENST00000481965 RPL39P62891 51 aaKnown RBP1.91□□□□□ -2.1
SEC22A-207ENST00000481965 ADIRFQ15847 76 aa1.91□□□□□ -2.1
SEC22A-207ENST00000481965 KRTAP21-2Q3LI59 83 aa1.91□□□□□ -2.1
SEC22A-207ENST00000481965 COL5A1-AS1Q5SY13 56 aa1.91□□□□□ -2.1
SEC22A-207ENST00000481965 ALKAL2Q6UX46 152 aa1.91□□□□□ -2.1
SEC22A-207ENST00000481965 C20orf197Q8N268 126 aa1.91□□□□□ -2.1
SEC22A-207ENST00000481965 CYP4F30PQ9H0H9 118 aa1.91□□□□□ -2.1
SEC22A-207ENST00000481965 TOMM7Q9P0U1 55 aa1.91□□□□□ -2.1
SEC22A-207ENST00000481965 C6orf48Q9UBA6 75 aa1.91□□□□□ -2.1
SEC22A-207ENST00000481965 V9GYV3 84 aa1.91□□□□□ -2.1
SEC22A-207ENST00000481965 D6R8Y8 96 aa1.9□□□□□ -2.11
SEC22A-207ENST00000481965 F8VRH5 84 aa1.9□□□□□ -2.11
SEC22A-207ENST00000481965 BCE1O60756 84 aa1.9□□□□□ -2.11
SEC22A-207ENST00000481965 Q8IZM0 81 aa1.9□□□□□ -2.11
SEC22A-207ENST00000481965 LINC00208Q96KT6 92 aa1.9□□□□□ -2.11
SEC22A-207ENST00000481965 NXT2Q9NPJ8 142 aaKnown RBP1.9□□□□□ -2.11
SEC22A-207ENST00000481965 SPAG11AQ6PDA7 123 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms