RNA–Protein interactions for RNA: ENST00000481690.2

GPCPD1-206, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 3

Gene GPCPD1, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-206ENST00000481690 DSCR8Q96T75 97 aa11.22□□□□□ -0.61
GPCPD1-206ENST00000481690 A0A1B0GVX0 72 aa11.18□□□□□ -0.62
GPCPD1-206ENST00000481690 C8orf87E5RJ46 101 aa11.17□□□□□ -0.62
GPCPD1-206ENST00000481690 KRTAP9-8Q9BYQ0 159 aa11.17□□□□□ -0.62
GPCPD1-206ENST00000481690 RBM12B-AS1Q9P1G2 102 aa11.17□□□□□ -0.62
GPCPD1-206ENST00000481690 BAALC-AS2P0C853 105 aa11.16□□□□□ -0.62
GPCPD1-206ENST00000481690 C9JAW5 83 aa11.14□□□□□ -0.63
GPCPD1-206ENST00000481690 HRES1P13985 223 aa11.14□□□□□ -0.63
GPCPD1-206ENST00000481690 J3KT08 172 aa11.1□□□□□ -0.63
GPCPD1-206ENST00000481690 MPLKIPQ8TAP9 179 aa11.1□□□□□ -0.63
GPCPD1-206ENST00000481690 C21orf62-AS1Q17RA5 79 aa11.09□□□□□ -0.63
GPCPD1-206ENST00000481690 NAA38Q9BRA0 125 aaKnown RBP11.08□□□□□ -0.64
GPCPD1-206ENST00000481690 Q6ZQT0 140 aa11.07□□□□□ -0.64
GPCPD1-206ENST00000481690 M0R143 59 aa11.05□□□□□ -0.64
GPCPD1-206ENST00000481690 ATXN8Q156A1 80 aa11.05□□□□□ -0.64
GPCPD1-206ENST00000481690 ZCCHC13Q8WW36 166 aaKnown RBP11.05□□□□□ -0.64
GPCPD1-206ENST00000481690 NDUFB1O75438 58 aa11.03□□□□□ -0.64
GPCPD1-206ENST00000481690 MT2AP02795 61 aa11.03□□□□□ -0.64
GPCPD1-206ENST00000481690 JMJD7-PLA2G4BH0Y9G9 81 aa11.01□□□□□ -0.65
GPCPD1-206ENST00000481690 MTURNQ8N3F0 131 aa10.98□□□□□ -0.65
GPCPD1-206ENST00000481690 LOC110117498A0A087WWA1 95 aa10.97□□□□□ -0.65
GPCPD1-206ENST00000481690 SPINK7P58062 85 aa10.97□□□□□ -0.65
GPCPD1-206ENST00000481690 C8orf17Q9NRJ1 99 aa10.96□□□□□ -0.65
GPCPD1-206ENST00000481690 A8MWP4 228 aa10.95□□□□□ -0.66
GPCPD1-206ENST00000481690 MT1FP04733 61 aa10.95□□□□□ -0.66
GPCPD1-206ENST00000481690 LYRM7Q5U5X0 104 aa10.95□□□□□ -0.66
GPCPD1-206ENST00000481690 Q8N9P0 234 aaPredicted RBP10.95□□□□□ -0.66
GPCPD1-206ENST00000481690 C14orf132Q9NPU4 83 aa10.94□□□□□ -0.66
GPCPD1-206ENST00000481690 USH2AO75445 5202 aa10.93□□□□□ -0.66
GPCPD1-206ENST00000481690 A0A1B0GW54 56 aa10.92□□□□□ -0.66
GPCPD1-206ENST00000481690 PDE6GP18545 87 aa10.92□□□□□ -0.66
GPCPD1-206ENST00000481690 IGKV3D-7A0A0C4DH55 119 aa10.91□□□□□ -0.66
GPCPD1-206ENST00000481690 KRTAP10-10P60014 251 aa10.91□□□□□ -0.66
GPCPD1-206ENST00000481690 Q6ZVQ6 151 aa10.87□□□□□ -0.67
GPCPD1-206ENST00000481690 WFDC13Q8IUB5 93 aa10.86□□□□□ -0.67
GPCPD1-206ENST00000481690 NREPQ16612 68 aa10.85□□□□□ -0.67
GPCPD1-206ENST00000481690 SSPOA2VEC9 5147 aa10.84□□□□□ -0.67
GPCPD1-206ENST00000481690 SMIM6P0DI80 62 aa10.84□□□□□ -0.67
GPCPD1-206ENST00000481690 BATFQ16520 125 aa10.84□□□□□ -0.67
GPCPD1-206ENST00000481690 PRR15Q8IV56 129 aa10.83□□□□□ -0.68
GPCPD1-206ENST00000481690 KRTAP9-3Q9BYQ3 159 aa10.82□□□□□ -0.68
GPCPD1-206ENST00000481690 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.8□□□□□ -0.68
GPCPD1-206ENST00000481690 MMP24-AS1A0A0U1RRL7 71 aa10.78□□□□□ -0.68
GPCPD1-206ENST00000481690 TSTD3H0UI37 97 aa10.77□□□□□ -0.69
GPCPD1-206ENST00000481690 TMEM254Q8TBM7 123 aa10.76□□□□□ -0.69
GPCPD1-206ENST00000481690 MRPL34Q9BQ48 92 aaKnown RBP10.76□□□□□ -0.69
GPCPD1-206ENST00000481690 K7EQZ3 153 aa10.72□□□□□ -0.69
GPCPD1-206ENST00000481690 NDUFS5O43920 106 aa10.72□□□□□ -0.69
GPCPD1-206ENST00000481690 hDV103S1A0JD37 113 aa10.71□□□□□ -0.69
GPCPD1-206ENST00000481690 KRTAP9-7A8MTY7 169 aa10.71□□□□□ -0.69
GPCPD1-206ENST00000481690 H3BT86 120 aa10.71□□□□□ -0.69
GPCPD1-206ENST00000481690 KRTAP19-1Q8IUB9 90 aa10.71□□□□□ -0.69
GPCPD1-206ENST00000481690 C9orf118A6NHY6 69 aa10.68□□□□□ -0.7
GPCPD1-206ENST00000481690 A0A1W2PPM0 123 aa10.65□□□□□ -0.7
GPCPD1-206ENST00000481690 BPY2O14599 106 aa10.65□□□□□ -0.7
GPCPD1-206ENST00000481690 TAX1BP3O14907 124 aa10.64□□□□□ -0.71
GPCPD1-206ENST00000481690 FCGBPQ9Y6R7 5405 aaPredicted RBP10.62□□□□□ -0.71
GPCPD1-206ENST00000481690 IGKV2D-30A0A075B6S6 120 aa10.6□□□□□ -0.71
GPCPD1-206ENST00000481690 IGKV2-30P06310 120 aa10.6□□□□□ -0.71
GPCPD1-206ENST00000481690 H1FX-AS1Q4G0G2 97 aa10.6□□□□□ -0.71
GPCPD1-206ENST00000481690 C7orf65Q6ZTY9 151 aa10.55□□□□□ -0.72
GPCPD1-206ENST00000481690 Q8N9L7 120 aa10.55□□□□□ -0.72
GPCPD1-206ENST00000481690 Q5W150 140 aa10.54□□□□□ -0.72
GPCPD1-206ENST00000481690 CASC2Q6XLA1 102 aa10.53□□□□□ -0.72
GPCPD1-206ENST00000481690 HCG22E2RYF7 251 aa10.51□□□□□ -0.73
GPCPD1-206ENST00000481690 SPCS1Q9Y6A9 102 aa10.51□□□□□ -0.73
GPCPD1-206ENST00000481690 LINC00846Q9NV44 126 aa10.5□□□□□ -0.73
GPCPD1-206ENST00000481690 LOC105371267A0A1B0GV96 52 aa10.49□□□□□ -0.73
GPCPD1-206ENST00000481690 KRTAP4-8Q9BYQ9 185 aa10.47□□□□□ -0.73
GPCPD1-206ENST00000481690 KRTAP19-6Q3LI70 58 aa10.45□□□□□ -0.74
GPCPD1-206ENST00000481690 C4orf26Q17RF5 130 aa10.41□□□□□ -0.74
GPCPD1-206ENST00000481690 CXCL6P80162 114 aa10.4□□□□□ -0.74
GPCPD1-206ENST00000481690 UBL5Q9BZL1 73 aa10.39□□□□□ -0.75
GPCPD1-206ENST00000481690 MACF1Q9UPN3 7388 aaKnown RBP10.33□□□□□ -0.76
GPCPD1-206ENST00000481690 PRO0461Q9UI25 63 aa10.32□□□□□ -0.76
GPCPD1-206ENST00000481690 COL5A1-AS1Q5SY13 56 aa10.31□□□□□ -0.76
GPCPD1-206ENST00000481690 K7EP34 96 aa10.29□□□□□ -0.76
GPCPD1-206ENST00000481690 C5orf47Q569G3 176 aa10.28□□□□□ -0.76
GPCPD1-206ENST00000481690 SYNE2Q8WXH0 6885 aaKnown RBP10.27□□□□□ -0.77
GPCPD1-206ENST00000481690 FAM236AA0A1B0GUQ0 79 aa10.22□□□□□ -0.77
GPCPD1-206ENST00000481690 FAM236BA0A1B0GV22 79 aa10.22□□□□□ -0.77
GPCPD1-206ENST00000481690 S4R3F8 94 aa10.22□□□□□ -0.77
GPCPD1-206ENST00000481690 KRTAP3-1Q9BYR8 98 aa10.2□□□□□ -0.78
GPCPD1-206ENST00000481690 C1orf64Q8NEQ6 169 aa10.19□□□□□ -0.78
GPCPD1-206ENST00000481690 KRTAP4-12Q9BQ66 201 aa10.15□□□□□ -0.78
GPCPD1-206ENST00000481690 TP53AIP1Q9HCN2 124 aa10.15□□□□□ -0.78
GPCPD1-206ENST00000481690 CSAG1Q6PB30 78 aa10.13□□□□□ -0.79
GPCPD1-206ENST00000481690 GTF2H5Q6ZYL4 71 aa10.13□□□□□ -0.79
GPCPD1-206ENST00000481690 LCA10Q71F78 164 aa10.12□□□□□ -0.79
GPCPD1-206ENST00000481690 ETDBQ3ZM63 59 aa10.08□□□□□ -0.8
GPCPD1-206ENST00000481690 F8W1H4 67 aa10.07□□□□□ -0.8
GPCPD1-206ENST00000481690 KRTAP6-3Q3LI67 103 aa10.03□□□□□ -0.8
GPCPD1-206ENST00000481690 Q5VV11 94 aa10.01□□□□□ -0.81
GPCPD1-206ENST00000481690 MT1BP07438 61 aa9.99□□□□□ -0.81
GPCPD1-206ENST00000481690 A6NN06 94 aa9.98□□□□□ -0.81
GPCPD1-206ENST00000481690 CYP4F30PQ9H0H9 118 aa9.98□□□□□ -0.81
GPCPD1-206ENST00000481690 PCP4L1A6NKN8 68 aa9.97□□□□□ -0.81
GPCPD1-206ENST00000481690 SPRR2GQ9BYE4 73 aa9.97□□□□□ -0.81
GPCPD1-206ENST00000481690 LCE3BQ5TA77 95 aa9.96□□□□□ -0.82
GPCPD1-206ENST00000481690 TRAV22A0A0B4J277 110 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms